Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv20235 Davidia involucrata HOM05D005585 ORTHO05D006905 7.0e-198 693.7 347 100.0
Hma1.2p1_0163F.1_g072970 Hydrangea macrophylla HOM05D005585 ORTHO05D006905 7.6e-152 540.8 343 79.3
Manes.06G004600 Manihot esculenta HOM05D005585 ORTHO05D006905 5.1e-140 501.5 359 71.9
TAR628G0421 Trochodendron aralioides HOM05D005585 ORTHO05D006905 8.2e-138 494.2 350 72.6
Thecc.03G059000 Theobroma cacao HOM05D005585 ORTHO05D006905 1.4e-137 493.4 347 70.9
CSS0043300 Camellia sinensis var. sinensis HOM05D005585 ORTHO05D006905 3.8e-135 485.3 360 68.1
Prupe.5G234900 Prunus persica HOM05D005585 ORTHO05D006905 5.5e-134 481.5 354 68.4
Cc04_g06090 Coffea canephora HOM05D005585 ORTHO05D006905 9.4e-134 480.7 351 70.4
Potri.012G045200 Populus trichocarpa HOM05D005585 ORTHO05D006905 9.4e-134 480.7 352 69.0
Rhsim08G0150200 Rhododendron simsii HOM05D005585 ORTHO05D006905 1.5e-131 473.4 328 72.9
Duzib068G1453 Durio zibethinus HOM05D005585 ORTHO05D006905 9.7e-131 470.7 352 68.5
QL10p030702 Quercus lobata HOM05D005585 ORTHO05D006905 1.7e-130 469.9 352 68.5
Gohir.A09G175000 Gossypium hirsutum HOM05D005585 ORTHO05D006905 2.2e-130 469.5 346 68.8
RcHm_v2.0_Chr7g0178161 Rosa chinensis HOM05D005585 ORTHO05D006905 4.5e-128 461.8 347 68.6
TWI60G0738 Tripterygium wilfordii HOM05D005585 ORTHO05D006905 4.5e-128 461.8 350 64.9
CiPaw.15G144600 Carya illinoinensis HOM05D005585 ORTHO05D006905 1.0e-127 460.7 359 67.1
GSVIVG01008457001 Vitis vinifera HOM05D005585 ORTHO05D006905 2.2e-127 459.5 354 66.7
PGR044G1909 Punica granatum HOM05D005585 ORTHO05D006905 2.9e-127 459.1 359 65.7
Gorai.006G191400 Gossypium raimondii HOM05D005585 ORTHO05D006905 5.0e-127 458.4 346 67.6
PGSC0003DMG400005757 Solanum tuberosum HOM05D005585 ORTHO05D006905 1.1e-126 457.2 346 67.6
MSTRG.6190 Avicennia marina HOM05D005585 ORTHO05D006905 5.5e-126 454.9 344 68.9
Haze_18886 Corylus avellana HOM05D005585 ORTHO05D006905 9.4e-126 454.1 337 70.3
Nn5g30598 Nelumbo nucifera HOM05D005585 ORTHO05D006905 1.2e-125 453.8 346 68.5
COL.COLO4_28892 Corchorus olitorius HOM05D005585 ORTHO05D006905 4.7e-125 451.8 350 67.1
MD06G1228400 Malus domestica HOM05D005585 ORTHO05D006905 1.4e-124 450.3 352 64.8
FAN08G0665 Fragaria x ananassa HOM05D005585 ORTHO05D006905 1.8e-124 449.9 350 66.6
Oeu026263.1 Olea europaea HOM05D005585 ORTHO05D006905 1.8e-124 449.9 324 69.4
FvH4_5g17500 Fragaria vesca HOM05D005585 ORTHO05D006905 3.9e-124 448.7 345 67.0
ECA236G2254 Erigeron canadensis HOM05D005585 ORTHO05D006905 2.0e-123 446.4 317 70.3
CANSAT80G2587 Cannabis sativa HOM05D005585 ORTHO05D006905 2.6e-123 446.0 346 64.5
CsaV3_1G007220 Cucumis sativus L. HOM05D005585 ORTHO05D006905 2.6e-123 446.0 346 65.6
MELO3C002139.2 Cucumis melo HOM05D005585 ORTHO05D006905 7.4e-123 444.5 346 65.6
Glyma.07G103200 Glycine max HOM05D005585 ORTHO05D006905 1.7e-122 443.4 312 70.2
DCAR_003540 Daucus carota HOM05D005585 ORTHO05D006905 2.2e-122 443.0 304 71.1
CANSAT80G1087 Cannabis sativa HOM05D005585 ORTHO05D006905 2.8e-122 442.6 346 64.2
Migut.I00267 Erythranthe guttata HOM05D005585 ORTHO05D006905 2.8e-122 442.6 345 66.1
Lj2g0015776 Lotus japonicus HOM05D005585 ORTHO05D006905 6.3e-122 441.4 313 70.0
ClCG04G010560 Citrullus lanatus HOM05D005585 ORTHO05D006905 8.2e-122 441.0 346 64.5
HanXRQChr06g0178071 Helianthus annuus HOM05D005585 ORTHO05D006905 1.4e-121 440.3 357 66.1
Phvul.004G149700 Phaseolus vulgaris HOM05D005585 ORTHO05D006905 7.0e-121 438.0 315 70.8
Ciclev10015784m.g Citrus clementina HOM05D005585 ORTHO05D006905 2.0e-120 436.4 300 71.7
Hund22311 Selenicereus undatus HOM05D005585 ORTHO05D006905 3.5e-120 435.6 348 64.9
Lsat_1_v5_gn_8_83620 Lactuca sativa HOM05D005585 ORTHO05D006905 4.5e-120 435.3 292 72.3
MD14G1237600 Malus domestica HOM05D005585 ORTHO05D006905 4.5e-120 435.3 350 63.4
vmacro08951 Vaccinium macrocarpon HOM05D005585 ORTHO05D006905 4.5e-120 435.3 373 62.5
Eucgr.B00886 Eucalyptus grandis HOM05D005585 ORTHO05D006905 7.7e-120 434.5 366 62.0
Nitab4.5_0001264g0050 Nicotiana tabacum HOM05D005585 ORTHO05D006905 1.7e-119 433.3 346 65.6
TPR.G8624 Trifolium pratense HOM05D005585 ORTHO05D006905 2.9e-119 432.6 351 65.2
Psat1g030240 Pisum sativum HOM05D005585 ORTHO05D006905 5.0e-119 431.8 347 63.7
Lalb_Chr14g0370621 Lupinus albus HOM05D005585 ORTHO05D006905 1.9e-118 429.9 346 65.0
Sed0009200 Sechium edule HOM05D005585 ORTHO05D006905 2.1e-117 426.4 345 62.0
arahy.Tifrunner.gnm1.ann1.8TLB5V Arachis hypogaea HOM05D005585 ORTHO05D006905 4.7e-117 425.2 344 64.0
Medtr6g069850 Medicago truncatula HOM05D005585 ORTHO05D006905 4.7e-117 425.2 347 62.8
Ca_25346_v3 Cicer arietinum L. HOM05D005585 ORTHO05D006905 3.0e-116 422.5 348 64.4
Lalb_Chr22g0353511 Lupinus albus HOM05D005585 ORTHO05D006905 1.2e-115 420.6 343 63.6
SalBow7G1179 Salvia bowleyana HOM05D005585 ORTHO05D006905 1.2e-115 420.6 346 63.9
AUR62001019 Chenopodium quinoa HOM05D005585 ORTHO05D006905 4.4e-115 418.7 280 71.8
Solyc03g118610.4 Solanum lycopersicum HOM05D005585 ORTHO05D006905 7.5e-115 417.9 349 63.3
BcaB06g25853 Brassica carinata HOM05D005585 ORTHO05D006905 2.2e-114 416.4 349 61.3
BcaC05g28739 Brassica carinata HOM05D005585 ORTHO05D006905 2.2e-114 416.4 353 60.9
BolC5t33576H Brassica oleracea HOM05D005585 ORTHO05D006905 2.2e-114 416.4 353 60.9
C05p48400 Brassica napus HOM05D005585 ORTHO05D006905 2.8e-114 416.0 354 61.0
Aqoxy5G00867 Aquilegia oxysepala HOM05D005585 ORTHO05D006905 3.7e-114 415.6 349 63.6
BraA01t03712Z Brassica rapa HOM05D005585 ORTHO05D006905 4.8e-114 415.2 320 64.4
ATR1153G069 Amborella trichopoda HOM05D005585 ORTHO05D006905 8.3e-114 414.5 332 62.0
Sopen03g037560 Solanum pennellii HOM05D005585 ORTHO05D006905 3.1e-113 412.5 346 63.6
A01p36480 Brassica napus HOM05D005585 ORTHO05D006905 4.1e-113 412.1 347 60.8
PSO017G0826 Papaver somniferum HOM05D005585 ORTHO05D006905 4.1e-113 412.1 347 62.5
A05p31890 Brassica napus HOM05D005585 ORTHO05D006905 5.3e-113 411.8 354 60.2
Thhalv10021015m.g Eutrema salsugineum HOM05D005585 ORTHO05D006905 7.0e-113 411.4 314 64.3
BraA05t22021Z Brassica rapa HOM05D005585 ORTHO05D006905 9.1e-113 411.0 354 59.9
THA.LOC104821828 Tarenaya hassleriana HOM05D005585 ORTHO05D006905 9.1e-113 411.0 344 62.8
PSO170G1171 Papaver somniferum HOM05D005585 ORTHO05D006905 1.2e-112 410.6 352 61.6
Lj5C159G17 Lonicera japonica HOM05D005585 ORTHO05D006905 1.6e-112 410.2 244 80.3
FAN04G2668 Fragaria x ananassa HOM05D005585 ORTHO05D006905 7.7e-112 407.9 329 63.8
Sabra12G0031400 Salix brachista HOM05D005585 ORTHO05D006905 2.9e-111 406.0 354 60.5
Aa31LG8G4780 Aethionema arabicum HOM05D005585 ORTHO05D006905 8.5e-111 404.4 343 61.5
Peaxi162Scf00314g00335 Petunia axillaris HOM05D005585 ORTHO05D006905 8.5e-111 404.4 256 76.2
Sp3g16030 Schrenkiella parvula HOM05D005585 ORTHO05D006905 1.1e-110 404.1 317 63.7
BcaC09g48755 Brassica carinata HOM05D005585 ORTHO05D006905 3.2e-110 402.5 320 63.1
C01p46240 Brassica napus HOM05D005585 ORTHO05D006905 3.2e-110 402.5 320 63.1
BolC1t04585H Brassica oleracea HOM05D005585 ORTHO05D006905 3.2e-110 402.5 320 63.1
AL3G31080 Arabidopsis lyrata HOM05D005585 ORTHO05D006905 4.2e-110 402.1 291 65.3
FAN18G2151 Fragaria x ananassa HOM05D005585 ORTHO05D006905 5.5e-110 401.7 326 63.8
arahy.Tifrunner.gnm1.ann1.E1YKD2 Arachis hypogaea HOM05D005585 ORTHO05D006905 2.1e-109 399.8 321 63.6
Carub.0003s1764 Capsella rubella HOM05D005585 ORTHO05D006905 2.1e-109 399.8 287 66.6
Nitab4.5_0010397g0010 Nicotiana tabacum HOM05D005585 ORTHO05D006905 1.0e-108 397.5 332 62.3
AT3G17910 Arabidopsis thaliana HOM05D005585 ORTHO05D006905 2.3e-108 396.4 291 64.3
BcaB04g20808 Brassica carinata HOM05D005585 ORTHO05D006905 4.0e-108 395.6 318 62.6
CARHR093240 Cardamine hirsuta HOM05D005585 ORTHO05D006905 9.8e-107 391.0 315 62.2
EL10Ac4g09125 Beta vulgaris HOM05D005585 ORTHO05D006905 1.7e-106 390.2 326 62.0
Hma1.2p1_0163F.1_g072980 Hydrangea macrophylla HOM05D005585 ORTHO05D006905 1.1e-105 387.5 225 81.8
Sc12g0007980 Simmondsia chinensis HOM05D005585 ORTHO05D006905 4.5e-104 382.1 278 66.2
Aqoxy5G00865 Aquilegia oxysepala HOM05D005585 ORTHO05D006905 6.6e-103 378.3 258 72.1
Glyma.09G174400 Glycine max HOM05D005585 ORTHO05D006905 4.2e-102 375.6 254 71.3
TAR628G1367 Trochodendron aralioides HOM05D005585 ORTHO05D006905 4.2e-102 375.6 255 74.5
VMungo0464G1491 Vigna mungo HOM05D005585 ORTHO05D006905 2.6e-99 366.3 245 72.2
Os03g0200700 Oryza sativa ssp. japonica HOM05D005585 ORTHO05D006905 3.7e-98 362.5 291 61.9
HPP92_019169 Vanilla planifolia HOM05D005585 ORTHO05D006905 5.9e-96 355.1 341 55.4
CAN.G843.48 Capsicum annuum HOM05D005585 ORTHO05D006905 8.6e-95 351.3 294 62.2
CDE04G0750 Ceratophyllum demersum HOM05D001130 ORTHO05D006905 7.3e-94 348.2 301 60.1
Ah.06g192310 Amaranthus hybridus HOM05D005585 ORTHO05D008527 6.1e-93 345.1 256 65.6
QL12p007232 Quercus lobata HOM05D005585 ORTHO05D006905 4.0e-92 342.4 400 49.2
Cpa.g.c34889 Carica papaya HOM05D005585 ORTHO05D006905 2.0e-91 340.1 220 75.0
unitig_27.g25108 Utricularia gibba HOM05D005585 ORTHO05D006905 5.0e-87 325.5 338 53.0
AUR62004935 Chenopodium quinoa HOM05D005585 ORTHO05D006905 2.1e-85 320.1 222 69.8
Zm00001eb007820 Zea mays HOM05D005585 ORTHO05D006905 8.0e-85 318.2 255 62.4
Eucgr.B00986 Eucalyptus grandis HOM05D005585 ORTHO05D006905 1.9e-78 297.0 198 71.7
Gohir.D09G170128 Gossypium hirsutum HOM05D005585 ORTHO05D006905 1.5e-70 270.8 177 75.7
Cpa.g.sc3.377 Carica papaya HOM05D005585 ORTHO05D006905 1.8e-68 263.8 303 49.5
Mapoly0094s0071 Marchantia polymorpha HOM05D005585 ORTHO05D006905 2.9e-66 256.5 298 46.6
SGA_v2.0_scaffold58G20371 Striga asiatica HOM05D005585 ORTHO05D006905 7.8e-64 248.4 224 62.1
Pp3c5_4480 Physcomitrium patens HOM05D005585 ORTHO05D006905 6.6e-63 245.4 336 41.4
SMO147G0391 Selaginella moellendorffii HOM05D005585 ORTHO05D006905 5.3e-60 235.7 288 43.4
CARHR038140 Cardamine hirsuta HOM05D005585 ORTHO05D006905 5.8e-59 232.3 306 44.1
Thhalv10011732m.g Eutrema salsugineum HOM05D005585 ORTHO05D006905 6.6e-55 218.8 244 47.1
AL1G55160 Arabidopsis lyrata HOM05D005585 ORTHO05D006905 1.1e-54 218.0 305 43.9
TAR628G1286 Trochodendron aralioides HOM05D005585 ORTHO05D006905 5.8e-51 205.7 131 75.6
AT1G48510 Arabidopsis thaliana HOM05D005585 ORTHO05D006905 1.7e-50 204.1 307 40.4
SEGI_34948 Sequoiadendron giganteum HOM05D005585 ORTHO05D006905 2.2e-50 203.8 153 62.1
Carub.0001s3764 Capsella rubella HOM05D005585 ORTHO05D006905 8.7e-47 191.8 302 39.1
AagrBONN_evm.TU.Sc2ySwM_340.176 Anthoceros agrestis HOM05D005585 ORTHO05D006905 4.8e-45 186.0 257 40.9
BcaB04g20806 Brassica carinata HOM05D005585 ORTHO05D006905 1.4e-44 184.5 179 54.7
Carub.0001s3763 Capsella rubella HOM05D005585 ORTHO05D006905 1.0e-42 178.3 297 38.7
Gohir.D09G170071 Gossypium hirsutum HOM05D005585 ORTHO05D006905 1.1e-41 174.9 155 58.7
FAN13G1174 Fragaria x ananassa HOM05D005585 ORTHO05D006905 7.9e-40 168.7 159 58.5
CBR_g50834 Chara braunii HOM05D002601 ORTHO05D002884 8.7e-39 165.2 381 30.7
BcaB08g34867 Brassica carinata HOM05D005585 ORTHO05D006905 1.3e-37 161.4 236 39.4
Zm00001eb338430 Zea mays HOM05D005585 ORTHO05D006905 2.6e-35 153.7 92 76.1
PRCOL_00002102 Prasinoderma coloniale HOM05D005585 ORTHO05D006905 4.5e-35 152.9 310 31.0
SEGI_19570 Sequoiadendron giganteum HOM05D005585 ORTHO05D006905 1.0e-34 151.8 127 59.8
Zm00001eb099110 Zea mays HOM05D005585 ORTHO05D006905 4.6e-32 142.9 121 60.3
Cre16.g664700 Chlamydomonas reinhardtii HOM05D005585 ORTHO05D006905 1.2e-16 91.7 308 26.3
CBR_g629 Chara braunii HOM05D005585 ORTHO05D006905 3.6e-16 90.1 213 31.5
MCO16G342 Micromonas commoda HOM05D005585 ORTHO05D006905 2.0e-11 74.3 222 25.7
CDE07G0810 Ceratophyllum demersum HOM05D005585 ORTHO05D006905 5.0e-10 69.7 72 54.2


User provided reference genes

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