Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv20207 Davidia involucrata HOM05D000264 ORTHO05D000152 1.2e-46 189.5 96 100.0
Dinv02176 Davidia involucrata HOM05D000264 ORTHO05D000152 1.2e-30 136.3 89 82.0
Dinv01341 Davidia involucrata HOM05D000264 ORTHO05D000152 1.0e-29 133.3 89 83.1
QL01p006014 Quercus lobata HOM05D000264 ORTHO05D000152 1.2e-19 99.8 104 56.7
Rhsim06G0144500 Rhododendron simsii HOM05D000264 ORTHO05D000152 8.1e-19 97.1 93 58.1
Rhsim06G0145300 Rhododendron simsii HOM05D000264 ORTHO05D000152 4.0e-18 94.7 94 57.4
Rhsim06G0144100 Rhododendron simsii HOM05D000264 ORTHO05D000152 8.9e-18 93.6 96 56.2
CSS0000780 Camellia sinensis var. sinensis HOM05D000264 ORTHO05D000152 2.0e-17 92.4 97 54.6
Rhsim06G0144700 Rhododendron simsii HOM05D000264 ORTHO05D000152 7.6e-17 90.5 95 53.7
Rhsim06G0145000 Rhododendron simsii HOM05D000264 ORTHO05D000152 7.6e-17 90.5 95 55.8
Rhsim06G0145400 Rhododendron simsii HOM05D000264 ORTHO05D000152 7.6e-17 90.5 95 53.7
vmacro12293 Vaccinium macrocarpon HOM05D000264 ORTHO05D000152 7.6e-17 90.5 94 53.2
Rhsim06G0144600 Rhododendron simsii HOM05D000264 ORTHO05D000152 1.3e-16 89.7 96 53.1
Rhsim06G0144200 Rhododendron simsii HOM05D000264 ORTHO05D000152 2.2e-16 89.0 95 55.8
CSS0014264 Camellia sinensis var. sinensis HOM05D000264 ORTHO05D000152 2.9e-16 88.6 88 53.4
Migut.H01080 Erythranthe guttata HOM05D000264 ORTHO05D000152 2.9e-16 88.6 95 52.6
Sc06g0005980 Simmondsia chinensis HOM05D000264 ORTHO05D000152 4.9e-16 87.8 91 51.6
Migut.D00741 Erythranthe guttata HOM05D000264 ORTHO05D000152 6.4e-16 87.4 92 54.3
TAR624G0511 Trochodendron aralioides HOM05D000264 ORTHO05D000152 6.4e-16 87.4 95 47.4
Cc05_g06990 Coffea canephora HOM05D000264 ORTHO05D000152 8.3e-16 87.0 95 54.7
CSS0035240 Camellia sinensis var. sinensis HOM05D000264 ORTHO05D000152 1.1e-15 86.7 94 54.3
Cc05_g07000 Coffea canephora HOM05D000264 ORTHO05D000152 1.1e-15 86.7 96 53.1
GSVIVG01020530001 Vitis vinifera HOM05D000264 ORTHO05D000152 1.1e-15 86.7 97 50.5
Dinv02171 Davidia involucrata HOM05D000264 ORTHO05D000152 1.9e-15 85.9 97 49.5
TWI36G1112 Tripterygium wilfordii HOM05D000264 ORTHO05D000152 1.9e-15 85.9 99 49.5
TAR624G1302 Trochodendron aralioides HOM05D000264 ORTHO05D000152 1.9e-15 85.9 95 47.4
Ah.15g093680 Amaranthus hybridus HOM05D000264 ORTHO05D000152 2.4e-15 85.5 102 50.0
Hund18035 Selenicereus undatus HOM05D000264 ORTHO05D000152 3.2e-15 85.1 112 43.8
vmacro12290 Vaccinium macrocarpon HOM05D000264 ORTHO05D000152 3.2e-15 85.1 94 48.9
vmacro22812 Vaccinium macrocarpon HOM05D000264 ORTHO05D000152 3.2e-15 85.1 94 48.9
Ah.15g093670 Amaranthus hybridus HOM05D000264 ORTHO05D000152 4.1e-15 84.7 102 50.0
CSS0049254 Camellia sinensis var. sinensis HOM05D000264 ORTHO05D000152 5.4e-15 84.3 105 50.5
Ah.03g134300 Amaranthus hybridus HOM05D000264 ORTHO05D000152 7.1e-15 84.0 103 47.6
Dinv23656 Davidia involucrata HOM05D000264 ORTHO05D000152 7.1e-15 84.0 117 47.0
Dinv26423 Davidia involucrata HOM05D000264 ORTHO05D000152 7.1e-15 84.0 91 50.5
QL01p006033 Quercus lobata HOM05D000264 ORTHO05D000152 7.1e-15 84.0 118 48.3
QL08p039639 Quercus lobata HOM05D000264 ORTHO05D000152 9.2e-15 83.6 93 49.5
Sc12g0002980 Simmondsia chinensis HOM05D000264 ORTHO05D000152 9.2e-15 83.6 99 51.5
Actinidia11042 Actinidia chinensis HOM05D000264 ORTHO05D000152 1.6e-14 82.8 96 50.0
CSS0028437 Camellia sinensis var. sinensis HOM05D000264 ORTHO05D000152 1.6e-14 82.8 88 50.0
QL05p018838 Quercus lobata HOM05D000264 ORTHO05D000152 1.6e-14 82.8 99 53.5
Sc16g0001410 Simmondsia chinensis HOM05D000264 ORTHO05D000152 1.6e-14 82.8 97 50.5
Dinv01345 Davidia involucrata HOM05D000264 ORTHO05D000152 2.1e-14 82.4 91 47.3
QL05p018975 Quercus lobata HOM05D000264 ORTHO05D000152 2.1e-14 82.4 99 52.5
vmacro12289 Vaccinium macrocarpon HOM05D000264 ORTHO05D000152 2.1e-14 82.4 95 49.5
QL02p056100 Quercus lobata HOM05D000264 ORTHO05D000152 6.0e-14 80.9 99 52.5
CSS0018607 Camellia sinensis var. sinensis HOM05D000264 ORTHO05D000152 1.0e-13 80.1 92 51.1
Sc07g0003550 Simmondsia chinensis HOM05D000264 ORTHO05D000152 1.0e-13 80.1 89 50.6
Actinidia11041 Actinidia chinensis HOM05D000264 ORTHO05D000152 1.3e-13 79.7 96 50.0
BcaB01g01946 Brassica carinata HOM05D000264 ORTHO05D000152 1.3e-13 79.7 93 51.6
Hma1.2p1_0213F.1_g090350 Hydrangea macrophylla HOM05D000264 ORTHO05D000152 1.3e-13 79.7 95 45.3
QL04p023639 Quercus lobata HOM05D000264 ORTHO05D000152 1.7e-13 79.3 96 51.0
Ah.15g093690 Amaranthus hybridus HOM05D000264 ORTHO05D000152 2.3e-13 79.0 102 48.0
Actinidia11043 Actinidia chinensis HOM05D000264 ORTHO05D000152 3.0e-13 78.6 94 47.9
BcaC04g23970 Brassica carinata HOM05D000264 ORTHO05D000152 3.0e-13 78.6 93 49.5
C09p02850 Brassica napus HOM05D000264 ORTHO05D000152 3.0e-13 78.6 93 49.5
BraA03t12224Z Brassica rapa HOM05D000264 ORTHO05D000152 3.0e-13 78.6 90 50.0
ECA246G1346 Erigeron canadensis HOM05D000264 ORTHO05D000152 5.1e-13 77.8 96 51.0
QL04p024009 Quercus lobata HOM05D000264 ORTHO05D000152 5.1e-13 77.8 96 51.0
AT4G03490 Arabidopsis thaliana HOM05D000264 ORTHO05D000152 6.6e-13 77.4 95 48.4
AUR62003194 Chenopodium quinoa HOM05D000264 ORTHO05D000152 8.6e-13 77.0 134 37.3
Rhsim06G0144300 Rhododendron simsii HOM05D000264 ORTHO05D000152 8.6e-13 77.0 95 48.4
GSVIVG01030360001 Vitis vinifera HOM05D000264 ORTHO05D000152 8.6e-13 77.0 95 50.5
BcaC01g06675 Brassica carinata HOM05D000264 ORTHO05D000152 1.1e-12 76.6 90 50.0
C03p36730 Brassica napus HOM05D000264 ORTHO05D000152 1.1e-12 76.6 90 50.0
BolC3t15987H Brassica oleracea HOM05D000264 ORTHO05D000152 1.1e-12 76.6 90 50.0
DCAR_014775 Daucus carota HOM05D000264 ORTHO05D000152 1.1e-12 76.6 96 46.9
Sc16g0001300 Simmondsia chinensis HOM05D000264 ORTHO05D000152 1.1e-12 76.6 95 50.5
AT4G03460 Arabidopsis thaliana HOM05D000264 ORTHO05D000152 1.5e-12 76.3 90 52.2
AUR62020785 Chenopodium quinoa HOM05D000264 ORTHO05D000152 1.5e-12 76.3 103 43.7
Nn1g06590 Nelumbo nucifera HOM05D000264 ORTHO05D000152 1.5e-12 76.3 96 45.8
Carub.0006s3361 Capsella rubella HOM05D000264 ORTHO05D000152 2.5e-12 75.5 91 51.6
AUR62027914 Chenopodium quinoa HOM05D000264 ORTHO05D000152 2.5e-12 75.5 103 42.7
BcaC03g17617 Brassica carinata HOM05D000264 ORTHO05D000152 3.3e-12 75.1 90 50.0
BolC2t11673H Brassica oleracea HOM05D000264 ORTHO05D000152 3.3e-12 75.1 90 50.0
GSVIVG01020519001 Vitis vinifera HOM05D000264 ORTHO05D000152 3.3e-12 75.1 95 49.5
EL10Ac6g14901 Beta vulgaris HOM05D000264 ORTHO05D000152 4.3e-12 74.7 127 41.7
BcaB01g02537 Brassica carinata HOM05D000264 ORTHO05D000152 4.3e-12 74.7 90 47.8
GSVIVG01020517001 Vitis vinifera HOM05D000264 ORTHO05D000152 4.3e-12 74.7 90 51.1
A02p37150 Brassica napus HOM05D000264 ORTHO05D000152 5.6e-12 74.3 90 50.0
BraA02t08701Z Brassica rapa HOM05D000264 ORTHO05D000152 5.6e-12 74.3 90 50.0
Rhsim06G0145100 Rhododendron simsii HOM05D000264 ORTHO05D000152 5.6e-12 74.3 95 44.2
Hund16575 Selenicereus undatus HOM05D000264 ORTHO05D000152 5.6e-12 74.3 125 41.6
GSVIVG01020527001 Vitis vinifera HOM05D000264 ORTHO05D000152 5.6e-12 74.3 93 53.8
GSVIVG01030371001 Vitis vinifera HOM05D000264 ORTHO05D000152 5.6e-12 74.3 95 49.5
GSVIVG01020524001 Vitis vinifera HOM05D000264 ORTHO05D000152 7.3e-12 73.9 92 50.0
BcaB07g30051 Brassica carinata HOM05D000264 ORTHO05D000152 9.6e-12 73.6 90 47.8
GSVIVG01030367001 Vitis vinifera HOM05D000264 ORTHO05D000152 9.6e-12 73.6 90 50.0
AT1G03670 Arabidopsis thaliana HOM05D000264 ORTHO05D000152 1.2e-11 73.2 89 51.7
GSVIVG01030362001 Vitis vinifera HOM05D000264 ORTHO05D000152 1.2e-11 73.2 95 49.5
GSVIVG01030363001 Vitis vinifera HOM05D000264 ORTHO05D000152 1.2e-11 73.2 90 50.0
AUR62008009 Chenopodium quinoa HOM05D000264 ORTHO05D000152 2.1e-11 72.4 124 41.9
Lj1C726T14 Lonicera japonica HOM05D000264 ORTHO05D000152 2.1e-11 72.4 91 45.1
QL01p018981 Quercus lobata HOM05D000264 ORTHO05D000152 2.1e-11 72.4 93 48.4
GSVIVG01030361001 Vitis vinifera HOM05D000264 ORTHO05D000152 2.1e-11 72.4 90 50.0
C02p56170 Brassica napus HOM05D000264 ORTHO05D000152 2.8e-11 72.0 90 48.9
Migut.H01079 Erythranthe guttata HOM05D000264 ORTHO05D000152 2.8e-11 72.0 95 46.3
BolC9t53211H Brassica oleracea HOM05D000264 ORTHO05D000152 3.6e-11 71.6 102 45.1
CARHR251900 Cardamine hirsuta HOM05D000264 ORTHO05D000001 3.6e-11 71.6 91 49.5
AUR62003189 Chenopodium quinoa HOM05D000264 ORTHO05D000152 3.6e-11 71.6 124 41.1
Thecc.02G180600 Theobroma cacao HOM05D000264 ORTHO05D000152 4.7e-11 71.2 98 46.9
CARHR251860 Cardamine hirsuta HOM05D000264 ORTHO05D000152 6.2e-11 70.9 95 45.3
Sp6g04290 Schrenkiella parvula HOM05D000264 ORTHO05D000152 6.2e-11 70.9 89 52.8
GSVIVG01030366001 Vitis vinifera HOM05D000264 ORTHO05D000152 6.2e-11 70.9 95 48.4
SalBow1G8685 Salvia bowleyana HOM05D000264 ORTHO05D000152 8.1e-11 70.5 95 45.3
CARHR100500 Cardamine hirsuta HOM05D000264 ORTHO05D000152 1.1e-10 70.1 102 43.1
Lj8C113G17 Lonicera japonica HOM05D000264 ORTHO05D000152 1.1e-10 70.1 90 41.1
COL.COLO4_30202 Corchorus olitorius HOM05D000264 ORTHO05D000152 1.4e-10 69.7 98 44.9
Dinv02172 Davidia involucrata HOM05D000264 ORTHO05D000152 1.4e-10 69.7 116 40.5
BraA10t42486Z Brassica rapa HOM05D000264 ORTHO05D000152 1.8e-10 69.3 102 43.1
Lj2g0023266 Lotus japonicus HOM05D000264 ORTHO05D000152 1.8e-10 69.3 100 43.0
THA.LOC104801174 Tarenaya hassleriana HOM05D000264 ORTHO05D000152 1.8e-10 69.3 109 41.3
AUR62022207 Chenopodium quinoa HOM05D000264 ORTHO05D000152 2.4e-10 68.9 117 41.9
Prupe.3G135200 Prunus persica HOM05D000264 ORTHO05D000152 2.4e-10 68.9 90 48.9
BcaC05g24511 Brassica carinata HOM05D000264 ORTHO05D000152 5.2e-10 67.8 102 43.1
BcaNung06827 Brassica carinata HOM05D000264 ORTHO05D000152 5.2e-10 67.8 102 43.1
C05p02120 Brassica napus HOM05D000264 ORTHO05D000152 5.2e-10 67.8 102 43.1
BolC5t28989H Brassica oleracea HOM05D000264 ORTHO05D000152 5.2e-10 67.8 102 43.1
vmacro22811 Vaccinium macrocarpon HOM05D000264 ORTHO05D000152 5.2e-10 67.8 83 47.0
CARHR004110 Cardamine hirsuta HOM05D000264 ORTHO05D000152 6.8e-10 67.4 102 44.1
HanXRQChr06g0174631 Helianthus annuus HOM05D000264 ORTHO05D000152 6.8e-10 67.4 97 45.4
Aa31LG5G2890 Aethionema arabicum HOM05D000264 ORTHO05D000152 8.9e-10 67.0 92 44.6
A02p13600 Brassica napus HOM05D000264 ORTHO05D000152 8.9e-10 67.0 92 44.6
BraA02t06419Z Brassica rapa HOM05D000264 ORTHO05D000152 8.9e-10 67.0 92 44.6
Thhalv10002443m.g Eutrema salsugineum HOM05D000264 ORTHO05D000152 8.9e-10 67.0 89 48.3
Oeu048152.1 Olea europaea HOM05D000264 ORTHO05D000152 8.9e-10 67.0 95 42.1
BcaB02g06911 Brassica carinata HOM05D000264 ORTHO05D000152 1.2e-09 66.6 102 42.2
Phvul.005G046201 Phaseolus vulgaris HOM05D000264 ORTHO05D000152 1.2e-09 66.6 96 39.6
RcHm_v2.0_Chr5g0041111 Rosa chinensis HOM05D000264 ORTHO05D000152 1.2e-09 66.6 131 38.2
CARHR002990 Cardamine hirsuta HOM05D000264 ORTHO05D000152 1.5e-09 66.2 96 44.8
RcHm_v2.0_Chr3g0461161 Rosa chinensis HOM05D000264 ORTHO05D000152 1.5e-09 66.2 100 44.0
Phvul.005G046300 Phaseolus vulgaris HOM05D000264 ORTHO05D000152 2.6e-09 65.5 103 39.8
Phvul.005G046600 Phaseolus vulgaris HOM05D000264 ORTHO05D000152 2.6e-09 65.5 98 38.8
Phvul.005G047150 Phaseolus vulgaris HOM05D000264 ORTHO05D000152 2.6e-09 65.5 96 39.6
AT4G03500 Arabidopsis thaliana HOM05D000264 ORTHO05D000152 3.4e-09 65.1 91 47.3
Prupe.3G135100 Prunus persica HOM05D000264 ORTHO05D000152 5.8e-09 64.3 106 42.5
Lj2g0018878 Lotus japonicus HOM05D000264 ORTHO05D000152 7.6e-09 63.9 101 39.6
Eucgr.K01000 Eucalyptus grandis HOM05D000264 ORTHO05D000152 9.9e-09 63.5 97 42.3
Ah.01g022540 Amaranthus hybridus HOM05D000264 ORTHO05D000152 1.3e-08 63.2 89 43.8
Cpa.g.sc34.146 Carica papaya HOM05D000264 ORTHO05D000152 1.3e-08 63.2 97 39.2
BcaB01g01945 Brassica carinata HOM05D000264 ORTHO05D000152 1.7e-08 62.8 92 45.7
Ah.01g022500 Amaranthus hybridus HOM05D000264 ORTHO05D000152 2.2e-08 62.4 88 44.3
Carub.0006s3362 Capsella rubella HOM05D000264 ORTHO05D000152 2.2e-08 62.4 87 46.0
Cpa.g.sc34.145 Carica papaya HOM05D000264 ORTHO05D000152 2.2e-08 62.4 98 43.9
Migut.H01077 Erythranthe guttata HOM05D000264 ORTHO05D000152 2.2e-08 62.4 79 43.0
GSVIVG01030372001 Vitis vinifera HOM05D000264 ORTHO05D000152 2.2e-08 62.4 93 41.9
Eucgr.K00996 Eucalyptus grandis HOM05D000264 ORTHO05D000152 2.9e-08 62.0 92 45.7
BcaC04g23968 Brassica carinata HOM05D000264 ORTHO05D000152 3.8e-08 61.6 92 44.6
A09p02790 Brassica napus HOM05D000264 ORTHO05D000152 3.8e-08 61.6 92 45.7
Carub.0008s1779 Capsella rubella HOM05D000264 ORTHO05D000152 3.8e-08 61.6 89 44.9
BolC9t53212H Brassica oleracea HOM05D000264 ORTHO05D000152 4.9e-08 61.2 92 44.6
QL05p012353 Quercus lobata HOM05D000264 ORTHO05D000152 4.9e-08 61.2 92 40.2
FvH4_3g05910 Fragaria vesca HOM05D000264 ORTHO05D000152 8.4e-08 60.5 125 38.4
TWI36G0228 Tripterygium wilfordii HOM05D000264 ORTHO05D000152 8.4e-08 60.5 92 44.6
TAR624G0104 Trochodendron aralioides HOM05D000264 ORTHO05D000152 1.4e-07 59.7 104 37.5
Thhalv10028559m.g Eutrema salsugineum HOM05D000264 ORTHO05D000152 1.9e-07 59.3 91 44.0
Sc07g0003530 Simmondsia chinensis HOM05D000264 ORTHO05D000152 1.9e-07 59.3 73 46.6
AT4G03450 Arabidopsis thaliana HOM05D000264 ORTHO05D000152 2.4e-07 58.9 90 42.2
AT4G03480 Arabidopsis thaliana HOM05D000264 ORTHO05D000152 5.4e-07 57.8 90 44.4
C02p21940 Brassica napus HOM05D000264 ORTHO05D000152 5.4e-07 57.8 92 40.2
Thhalv10002604m.g Eutrema salsugineum HOM05D000264 ORTHO05D000152 5.4e-07 57.8 92 45.7
Hma1.2p1_0213F.1_g090330 Hydrangea macrophylla HOM05D000264 ORTHO05D000152 5.4e-07 57.8 92 43.5
EL10Ac4g07662 Beta vulgaris HOM05D000264 ORTHO05D000152 7.1e-07 57.4 99 38.4
CARHR251840 Cardamine hirsuta HOM05D000264 ORTHO05D000152 7.1e-07 57.4 84 48.8
Eucgr.K00989 Eucalyptus grandis HOM05D000264 ORTHO05D000152 7.1e-07 57.4 96 45.8
FAN18G1722 Fragaria x ananassa HOM05D000264 ORTHO05D000152 7.1e-07 57.4 135 34.8
Eucgr.E02709 Eucalyptus grandis HOM05D000264 ORTHO05D000152 9.3e-07 57.0 94 37.2
VMungo1080G1027 Vigna mungo HOM05D000264 ORTHO05D000152 9.3e-07 57.0 97 37.1
Eucgr.K00973 Eucalyptus grandis HOM05D000264 ORTHO05D000152 1.2e-06 56.6 86 40.7
Eucgr.K00975 Eucalyptus grandis HOM05D000264 ORTHO05D000152 1.2e-06 56.6 96 37.5
Phvul.005G046400 Phaseolus vulgaris HOM05D000264 ORTHO05D000152 1.6e-06 56.2 96 35.4
AT4G03440 Arabidopsis thaliana HOM05D000264 ORTHO05D000152 2.1e-06 55.8 93 45.2
CARHR251850 Cardamine hirsuta HOM05D000264 ORTHO05D000152 2.1e-06 55.8 92 41.3
Thhalv10028485m.g Eutrema salsugineum HOM05D000264 ORTHO05D000152 2.1e-06 55.8 83 44.6
Lalb_Chr20g0108371 Lupinus albus HOM05D000264 ORTHO05D000152 2.1e-06 55.8 101 38.6
Phvul.005G046900 Phaseolus vulgaris HOM05D000264 ORTHO05D000152 2.1e-06 55.8 105 38.1
Eucgr.K00982 Eucalyptus grandis HOM05D000264 ORTHO05D000152 4.6e-06 54.7 96 38.5
Glyma.12G111500 Glycine max HOM05D000264 ORTHO05D000152 4.6e-06 54.7 91 41.8
Eucgr.C03969 Eucalyptus grandis HOM05D000264 ORTHO05D000152 6.0e-06 54.3 101 38.6
QL08p038422 Quercus lobata HOM05D000264 ORTHO05D000152 6.0e-06 54.3 88 38.6
TWI36G1297 Tripterygium wilfordii HOM05D000264 ORTHO05D000152 6.0e-06 54.3 105 38.1
Carub.0006s3359 Capsella rubella HOM05D000264 ORTHO05D000152 7.8e-06 53.9 83 47.0


User provided reference genes

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