Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv20198 Davidia involucrata HOM05D006259 ORTHO05D007804 3.6e-174 614.8 301 100.0
CSS0047365 Camellia sinensis var. sinensis HOM05D006259 ORTHO05D007804 8.4e-139 497.3 301 80.7
CSS0047678 Camellia sinensis var. sinensis HOM05D006259 ORTHO05D007804 8.4e-139 497.3 301 80.7
Prupe.4G176500 Prunus persica HOM05D006259 ORTHO05D007804 8.4e-131 470.7 301 77.7
RcHm_v2.0_Chr5g0032751 Rosa chinensis HOM05D006259 ORTHO05D007804 5.1e-128 461.5 301 74.1
vmacro11886 Vaccinium macrocarpon HOM05D006259 ORTHO05D007804 1.9e-127 459.5 296 77.0
QL08p022713 Quercus lobata HOM05D006259 ORTHO05D007804 4.3e-127 458.4 300 76.0
MD11G1252500 Malus domestica HOM05D006259 ORTHO05D007804 4.8e-126 454.9 301 75.7
FvH4_3g19490 Fragaria vesca HOM05D006259 ORTHO05D007804 1.7e-123 446.4 301 72.1
Lj8A154G76 Lonicera japonica HOM05D006259 ORTHO05D007804 2.9e-123 445.7 293 76.1
FAN11G4033 Fragaria x ananassa HOM05D006259 ORTHO05D007804 6.5e-123 444.5 301 71.8
Cfa020561 Carpinus fangiana HOM05D006259 ORTHO05D007804 9.3e-122 440.7 295 75.3
Ciclev10008595m.g Citrus clementina HOM05D006259 ORTHO05D007804 2.7e-121 439.1 297 74.1
CiPaw.11G171900 Carya illinoinensis HOM05D006259 ORTHO05D007804 4.6e-121 438.3 297 72.7
GSVIVG01014295001 Vitis vinifera HOM05D006259 ORTHO05D007804 3.0e-120 435.6 298 74.8
Haze_09453 Corylus avellana HOM05D006259 ORTHO05D007804 7.4e-119 431.0 294 72.8
Manes.15G089200 Manihot esculenta HOM05D006259 ORTHO05D007804 2.8e-118 429.1 297 73.4
Potri.011G116100 Populus trichocarpa HOM05D006259 ORTHO05D007804 8.2e-118 427.6 300 72.0
TWI39G0898 Tripterygium wilfordii HOM05D006259 ORTHO05D007804 1.1e-117 427.2 299 71.6
Lalb_Chr19g0134121 Lupinus albus HOM05D006259 ORTHO05D007804 9.0e-117 424.1 294 70.7
CANSAT56G1257 Cannabis sativa HOM05D006259 ORTHO05D007804 1.2e-116 423.7 298 71.1
TAR629G2204 Trochodendron aralioides HOM05D006259 ORTHO05D007804 2.6e-116 422.5 276 76.8
Cpa.g.sc622.1 Carica papaya HOM05D006259 ORTHO05D007804 1.7e-115 419.9 303 70.6
Migut.M00783 Erythranthe guttata HOM05D006259 ORTHO05D007804 3.8e-115 418.7 301 68.1
Cc05_g11780 Coffea canephora HOM05D006259 ORTHO05D007804 1.1e-114 417.2 297 70.7
Sabra11G0101700 Salix brachista HOM05D006259 ORTHO05D007804 1.4e-114 416.8 328 65.5
Ciclev10010717m.g Citrus clementina HOM05D006259 ORTHO05D007804 9.3e-114 414.1 295 71.5
Thecc.07G095600 Theobroma cacao HOM05D006259 ORTHO05D007804 1.6e-113 413.3 301 68.8
Nitab4.5_0002330g0080 Nicotiana tabacum HOM05D006259 ORTHO05D007804 2.7e-113 412.5 294 69.4
MSTRG.15241 Avicennia marina HOM05D006259 ORTHO05D007804 3.6e-113 412.1 298 66.8
Sopen07g031120 Solanum pennellii HOM05D006259 ORTHO05D007804 3.6e-113 412.1 294 69.4
Duzib268G0576 Durio zibethinus HOM05D006259 ORTHO05D007804 4.6e-113 411.8 301 69.8
Aqoxy1G02333 Aquilegia oxysepala HOM05D006259 ORTHO05D007804 6.1e-113 411.4 297 69.0
Glyma.06G237700 Glycine max HOM05D006259 ORTHO05D007804 2.3e-112 409.5 295 67.8
DCAR_017124 Daucus carota HOM05D006259 ORTHO05D007804 6.7e-112 407.9 296 68.6
Solyc07g062930.3 Solanum lycopersicum HOM05D006259 ORTHO05D007804 5.7e-111 404.8 294 69.4
Nitab4.5_0005017g0010 Nicotiana tabacum HOM05D006259 ORTHO05D007804 9.7e-111 404.1 294 67.7
Sed0019446 Sechium edule HOM05D006259 ORTHO05D007804 6.3e-110 401.4 300 67.3
Gorai.009G375900 Gossypium raimondii HOM05D006259 ORTHO05D007804 1.4e-109 400.2 294 68.0
Sc16g0007160 Simmondsia chinensis HOM05D006259 ORTHO05D007804 1.8e-109 399.8 296 67.9
TPR.G32110 Trifolium pratense HOM05D006259 ORTHO05D007804 5.3e-109 398.3 296 66.2
Duzib244G0007 Durio zibethinus HOM05D006259 ORTHO05D007804 9.1e-109 397.5 277 72.6
HanXRQChr11g0351981 Helianthus annuus HOM05D006259 ORTHO05D007804 7.7e-108 394.4 296 66.6
Rhsim06G0201700 Rhododendron simsii HOM05D006259 ORTHO05D007804 7.7e-108 394.4 316 65.2
SGA_v2.0_scaffold73G24236 Striga asiatica HOM05D006259 ORTHO05D007804 8.5e-107 391.0 300 66.3
Lsat_1_v5_gn_7_104661 Lactuca sativa HOM05D006259 ORTHO05D007804 1.4e-106 390.2 295 66.8
THA.LOC104811875 Tarenaya hassleriana HOM05D006259 ORTHO05D007804 1.9e-106 389.8 306 66.3
ClCG11G017880 Citrullus lanatus HOM05D006259 ORTHO05D007804 4.2e-106 388.7 288 67.0
Peaxi162Scf00069g01731 Petunia axillaris HOM05D006259 ORTHO05D007804 4.2e-106 388.7 293 66.6
Phvul.011G163100 Phaseolus vulgaris HOM05D006259 ORTHO05D007804 5.5e-106 388.3 295 63.7
CAN.G162.38 Capsicum annuum HOM05D006259 ORTHO05D007804 9.4e-106 387.5 294 66.0
CsaV3_4G033510 Cucumis sativus L. HOM05D006259 ORTHO05D007804 9.4e-106 387.5 300 65.7
FAN25G1146 Fragaria x ananassa HOM05D006259 ORTHO05D007804 9.4e-106 387.5 263 73.4
ECA236G1201 Erigeron canadensis HOM05D006259 ORTHO05D007804 1.2e-105 387.1 297 66.0
Eucgr.F01160 Eucalyptus grandis HOM05D006259 ORTHO05D007804 1.2e-105 387.1 286 69.2
FAN16G3026 Fragaria x ananassa HOM05D006259 ORTHO05D007804 1.2e-105 387.1 263 73.0
Medtr8g058780 Medicago truncatula HOM05D006259 ORTHO05D007804 3.6e-105 385.6 298 63.4
Medtr8g061260 Medicago truncatula HOM05D006259 ORTHO05D007804 3.6e-105 385.6 298 63.4
VMungo1127G0077 Vigna mungo HOM05D006259 ORTHO05D007804 3.6e-105 385.6 288 65.6
FAN21G1610 Fragaria x ananassa HOM05D006259 ORTHO05D007804 2.3e-104 382.9 301 65.1
arahy.Tifrunner.gnm1.ann1.J8ZMQ9 Arachis hypogaea HOM05D006259 ORTHO05D007804 3.0e-104 382.5 323 59.8
MELO3C025605.2 Cucumis melo HOM05D006259 ORTHO05D007804 3.0e-104 382.5 299 64.9
arahy.Tifrunner.gnm1.ann1.KCB6L6 Arachis hypogaea HOM05D006259 ORTHO05D007804 6.7e-104 381.3 316 60.8
Psat4g178120 Pisum sativum HOM05D006259 ORTHO05D007804 2.6e-103 379.4 297 63.3
Hund02234 Selenicereus undatus HOM05D006259 ORTHO05D007804 5.7e-103 378.3 293 64.5
ATR0150G016 Amborella trichopoda HOM05D006259 ORTHO05D007804 9.7e-103 377.5 293 63.1
AUR62019461 Chenopodium quinoa HOM05D006259 ORTHO05D007804 3.7e-102 375.6 295 65.1
Lj3g0016272 Lotus japonicus HOM05D006259 ORTHO05D007804 4.8e-102 375.2 296 63.9
EL10Ac4g08228 Beta vulgaris HOM05D006259 ORTHO05D007804 2.0e-100 369.8 292 64.4
Ah.04g164700 Amaranthus hybridus HOM05D006259 ORTHO05D007804 3.8e-99 365.5 292 65.1
BcaB05g22091 Brassica carinata HOM05D006259 ORTHO05D007804 2.5e-98 362.8 305 62.0
CARHR267060 Cardamine hirsuta HOM05D006259 ORTHO05D007804 4.2e-98 362.1 304 61.2
Atru.chr2.2422 Acer truncatum HOM05D006259 ORTHO05D007804 5.5e-98 361.7 236 77.1
Oeu025362.1 Olea europaea HOM05D006259 ORTHO05D007804 9.4e-98 360.9 296 63.9
Thhalv10015851m.g Eutrema salsugineum HOM05D006259 ORTHO05D007804 2.1e-97 359.8 303 61.1
Carub.0008s1423 Capsella rubella HOM05D006259 ORTHO05D007804 4.7e-97 358.6 302 59.9
Sp6g16000 Schrenkiella parvula HOM05D006259 ORTHO05D007804 8.0e-97 357.8 304 61.2
PSO541G2103 Papaver somniferum HOM05D006259 ORTHO05D007804 1.8e-96 356.7 272 66.9
PGR083G2616 Punica granatum HOM05D006259 ORTHO05D007804 6.7e-96 354.8 266 68.4
AT5G53920 Arabidopsis thaliana HOM05D006259 ORTHO05D007804 7.4e-95 351.3 299 60.5
PSO675G6900 Papaver somniferum HOM05D006259 ORTHO05D007804 1.7e-94 350.1 280 64.6
AL8G29030 Arabidopsis lyrata HOM05D006259 ORTHO05D007804 2.2e-94 349.7 299 60.2
A02p10700 Brassica napus HOM05D006259 ORTHO05D007804 6.3e-94 348.2 307 59.3
CDE05G3386 Ceratophyllum demersum HOM05D006259 ORTHO05D007804 6.3e-94 348.2 298 60.1
BcaC03g14368 Brassica carinata HOM05D006259 ORTHO05D007804 4.1e-93 345.5 307 58.6
Aa31LG3G10030 Aethionema arabicum HOM05D006259 ORTHO05D007804 3.5e-92 342.4 292 59.2
C02p17820 Brassica napus HOM05D006259 ORTHO05D007804 3.8e-91 339.0 320 56.9
BraA02t06133Z Brassica rapa HOM05D006259 ORTHO05D007804 3.8e-91 339.0 315 57.8
BolC2t07911H Brassica oleracea HOM05D006259 ORTHO05D007804 6.5e-91 338.2 322 56.5
Gohir.D05G348100 Gossypium hirsutum HOM05D006259 ORTHO05D007804 2.7e-89 332.8 239 69.9
Gohir.A04G035300 Gossypium hirsutum HOM05D006259 ORTHO05D007804 3.6e-89 332.4 301 58.8
HPP92_017550 Vanilla planifolia HOM05D006259 ORTHO05D007804 3.6e-89 332.4 294 58.5
Nn1g06450 Nelumbo nucifera HOM05D006259 ORTHO05D007804 1.5e-87 327.0 294 59.9
Os05g0497675 Oryza sativa ssp. japonica HOM05D006259 ORTHO05D007804 1.3e-83 313.9 297 53.9
unitig_46.g18320 Utricularia gibba HOM05D006259 ORTHO05D007804 1.1e-82 310.8 289 58.5
arahy.Tifrunner.gnm1.ann1.IZH9YM Arachis hypogaea HOM05D006259 ORTHO05D007804 5.7e-79 298.5 221 66.1
Hma1.2p1_1411F.1_g281740 Hydrangea macrophylla HOM05D006259 ORTHO05D007804 1.7e-78 297.0 192 81.2
arahy.Tifrunner.gnm1.ann1.JJTS0M Arachis hypogaea HOM05D006259 ORTHO05D007804 2.8e-78 296.2 247 61.1
Mapoly0161s0032 Marchantia polymorpha HOM05D006259 ORTHO05D007804 1.3e-75 287.3 313 48.2
Pp3c22_15620 Physcomitrium patens HOM05D006259 ORTHO05D007804 2.0e-71 273.5 313 45.0
Actinidia09701 Actinidia chinensis HOM05D006259 ORTHO05D007804 9.8e-71 271.2 178 77.5
AagrBONN_evm.TU.Sc2ySwM_362.1898 Anthoceros agrestis HOM05D006259 ORTHO05D007804 6.8e-64 248.4 314 43.0
COL.COLO4_36712 Corchorus olitorius HOM05D006259 ORTHO05D007804 1.2e-60 237.7 266 52.6
AUR62036169 Chenopodium quinoa HOM05D006259 ORTHO05D007804 3.2e-53 213.0 150 68.7
arahy.Tifrunner.gnm1.ann1.NGC2LD Arachis hypogaea HOM05D006259 ORTHO05D007804 5.8e-47 192.2 263 41.1
Zm00001eb352610 Zea mays HOM05D006259 ORTHO05D007804 9.9e-47 191.4 152 59.2
arahy.Tifrunner.gnm1.ann1.N67PK3 Arachis hypogaea HOM05D006259 ORTHO05D007804 2.9e-46 189.9 294 38.1
SMO230G0105 Selaginella moellendorffii HOM05D006259 ORTHO05D007804 3.7e-46 189.5 201 50.7
MCO08G332 Micromonas commoda HOM05D006259 ORTHO05D007804 1.9e-45 187.2 312 38.1
arahy.Tifrunner.gnm1.ann1.88153A Arachis hypogaea HOM05D006259 ORTHO05D007804 1.2e-44 184.5 266 39.8
Thecc.02G165400 Theobroma cacao HOM05D006259 ORTHO05D007804 1.6e-44 184.1 183 55.7
arahy.Tifrunner.gnm1.ann1.UFBT31 Arachis hypogaea HOM05D006259 ORTHO05D007804 1.1e-42 177.9 256 40.2
arahy.Tifrunner.gnm1.ann1.Y39XKR Arachis hypogaea HOM05D006259 ORTHO05D007804 2.5e-42 176.8 190 51.1
MBI18_g48079_MAGBIO Magnolia biondii HOM05D006259 ORTHO05D007804 2.5e-42 176.8 148 62.8
Cre09.g396735 Chlamydomonas reinhardtii HOM05D006259 ORTHO05D007804 3.3e-42 176.4 322 35.7
arahy.Tifrunner.gnm1.ann1.SB88KA Arachis hypogaea HOM05D006259 ORTHO05D007804 1.6e-41 174.1 305 35.1
arahy.Tifrunner.gnm1.ann1.H7I8JY Arachis hypogaea HOM05D006259 ORTHO05D007804 9.9e-39 164.9 150 53.3
PRCOL_00006646 Prasinoderma coloniale HOM05D006259 ORTHO05D007804 2.2e-38 163.7 237 35.4
PRCOL_00002790 Prasinoderma coloniale HOM05D006259 ORTHO05D007804 7.1e-37 158.7 250 36.4
arahy.Tifrunner.gnm1.ann1.LRZU8J Arachis hypogaea HOM05D006259 ORTHO05D007804 1.6e-36 157.5 254 37.4
arahy.Tifrunner.gnm1.ann1.5V52A0 Arachis hypogaea HOM05D006259 ORTHO05D007804 6.0e-36 155.6 137 54.0
COL.COLO4_00923 Corchorus olitorius HOM05D006259 ORTHO05D007804 2.6e-31 140.2 226 34.5
HPP92_017577 Vanilla planifolia HOM05D006259 ORTHO05D007804 6.6e-27 125.6 195 40.5
Duzib213G0106 Durio zibethinus HOM05D006259 ORTHO05D007804 5.3e-24 115.9 96 57.3
PRCOL_00002336 Prasinoderma coloniale HOM05D006259 ORTHO05D007804 4.2e-21 106.3 208 31.2
arahy.Tifrunner.gnm1.ann1.69KWVE Arachis hypogaea HOM05D007267 ORTHO05D009053 2.0e-07 60.8 52 53.8
arahy.Tifrunner.gnm1.ann1.BBFR3C Arachis hypogaea HOM05D003566 ORTHO05D009053 4.5e-07 59.7 48 54.2
Atru.chr2.2423 Acer truncatum HOM05D006259 ORTHO05D007804 7.6e-07 58.9 48 60.4


User provided reference genes

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