Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv20179 Davidia involucrata HOM05D002373 ORTHO05D008661 6.7e-185 650.6 338 100.0
CSS0006904 Camellia sinensis var. sinensis HOM05D002373 ORTHO05D008661 1.7e-135 486.5 333 74.2
Actinidia35249 Actinidia chinensis HOM05D002373 ORTHO05D008661 2.2e-132 476.1 325 75.7
CSS0005109 Camellia sinensis var. sinensis HOM05D002373 ORTHO05D008661 1.1e-131 473.8 334 73.4
GSVIVG01014327001 Vitis vinifera HOM05D002373 ORTHO05D008661 2.5e-131 472.6 325 75.1
TAR624G1149 Trochodendron aralioides HOM05D002373 ORTHO05D008661 4.2e-131 471.9 325 74.8
Thecc.07G090300 Theobroma cacao HOM05D002373 ORTHO05D008661 4.5e-125 451.8 325 72.0
MD11G1252400 Malus domestica HOM05D002373 ORTHO05D008661 1.3e-124 450.3 325 70.2
COL.COLO4_27178 Corchorus olitorius HOM05D002373 ORTHO05D008661 4.3e-123 445.3 320 71.9
Prupe.4G180500 Prunus persica HOM05D002373 ORTHO05D008661 7.3e-123 444.5 336 69.0
Gohir.D13G151000 Gossypium hirsutum HOM05D002373 ORTHO05D008661 9.5e-123 444.1 325 70.8
Gohir.A13G146100 Gossypium hirsutum HOM05D002373 ORTHO05D008661 1.4e-121 440.3 325 70.2
Ciclev10008924m.g Citrus clementina HOM05D002373 ORTHO05D008661 3.0e-121 439.1 325 69.5
RcHm_v2.0_Chr5g0033281 Rosa chinensis HOM05D002373 ORTHO05D008661 1.5e-120 436.8 325 67.7
Nn1g04122 Nelumbo nucifera HOM05D002373 ORTHO05D008661 2.0e-120 436.4 318 70.8
CANSAT56G3654 Cannabis sativa HOM05D002373 ORTHO05D008661 4.4e-120 435.3 326 68.7
Cpa.g.sc80.70 Carica papaya HOM05D002373 ORTHO05D008661 9.8e-120 434.1 322 70.2
DCAR_019560 Daucus carota HOM05D002373 ORTHO05D008661 1.3e-119 433.7 314 71.3
Solyc12g013870.3 Solanum lycopersicum HOM05D002373 ORTHO05D008661 1.7e-119 433.3 333 66.4
CAN.G213.9 Capsicum annuum HOM05D002373 ORTHO05D008661 4.9e-119 431.8 333 66.4
FAN11G3740 Fragaria x ananassa HOM05D002373 ORTHO05D008661 3.2e-118 429.1 326 67.5
FvH4_3g19840 Fragaria vesca HOM05D002373 ORTHO05D008661 4.1e-118 428.7 326 67.2
Lj1C842T3 Lonicera japonica HOM05D002373 ORTHO05D008661 2.0e-117 426.4 335 67.2
HanXRQChr12g0364201 Helianthus annuus HOM05D002373 ORTHO05D008661 3.5e-117 425.6 314 68.8
vmacro09529 Vaccinium macrocarpon HOM05D002373 ORTHO05D008661 5.9e-117 424.9 362 64.4
Glyma.12G224900 Glycine max HOM05D002373 ORTHO05D008661 1.3e-116 423.7 327 66.7
Cfa020577 Carpinus fangiana HOM05D002373 ORTHO05D008661 1.7e-116 423.3 327 66.4
MSTRG.12905 Avicennia marina HOM05D002373 ORTHO05D008661 3.0e-116 422.5 335 68.1
PGSC0003DMG400015321 Solanum tuberosum HOM05D002373 ORTHO05D008661 3.0e-116 422.5 325 66.8
Sopen12g007190 Solanum pennellii HOM05D002373 ORTHO05D008661 5.0e-116 421.8 325 66.5
Potri.011G119800 Populus trichocarpa HOM05D002373 ORTHO05D008661 8.6e-116 421.0 324 68.5
ECA240G3063 Erigeron canadensis HOM05D002373 ORTHO05D008661 1.9e-115 419.9 278 74.5
Thhalv10011660m.g Eutrema salsugineum HOM05D002373 ORTHO05D008661 3.3e-115 419.1 326 67.8
Phvul.002G286700 Phaseolus vulgaris HOM05D002373 ORTHO05D008661 4.3e-115 418.7 324 66.7
Peaxi162Scf00000g03511 Petunia axillaris HOM05D002373 ORTHO05D008661 5.6e-115 418.3 313 68.7
AL1G61480 Arabidopsis lyrata HOM05D002373 ORTHO05D008661 9.5e-115 417.5 327 67.0
Eucgr.F01146 Eucalyptus grandis HOM05D002373 ORTHO05D008661 1.2e-114 417.2 329 66.3
Lsat_1_v5_gn_9_97941 Lactuca sativa HOM05D002373 ORTHO05D008661 1.6e-114 416.8 314 68.2
MBI06_g23077_MAGBIO Magnolia biondii HOM05D002373 ORTHO05D008661 2.1e-114 416.4 299 69.9
Sabra11G0104200 Salix brachista HOM05D002373 ORTHO05D008661 2.8e-114 416.0 270 76.7
Medtr2g085340 Medicago truncatula HOM05D002373 ORTHO05D008661 3.6e-114 415.6 328 64.6
Aa31LG10G2010 Aethionema arabicum HOM05D002373 ORTHO05D008661 4.7e-114 415.2 328 66.2
FAN25G2634 Fragaria x ananassa HOM05D002373 ORTHO05D008661 8.0e-114 414.5 327 65.4
THA.LOC104810464 Tarenaya hassleriana HOM05D002373 ORTHO05D008661 8.0e-114 414.5 323 67.5
Lj3g0019501 Lotus japonicus HOM05D002373 ORTHO05D008661 1.0e-113 414.1 324 65.4
Migut.H01944 Erythranthe guttata HOM05D002373 ORTHO05D008661 1.4e-113 413.7 335 64.8
VMungo1080G1315 Vigna mungo HOM05D002373 ORTHO05D008661 1.4e-113 413.7 323 65.0
AT1G53120 Arabidopsis thaliana HOM05D002373 ORTHO05D008661 1.8e-113 413.3 325 65.5
CARHR043340 Cardamine hirsuta HOM05D002373 ORTHO05D008661 1.8e-113 413.3 330 66.1
Lalb_Chr25g0286331 Lupinus albus HOM05D002373 ORTHO05D008661 2.3e-113 412.9 323 65.6
Psat5g243920 Pisum sativum HOM05D002373 ORTHO05D008661 2.3e-113 412.9 326 63.8
arahy.Tifrunner.gnm1.ann1.CVL1T8 Arachis hypogaea HOM05D002373 ORTHO05D008661 3.1e-113 412.5 321 65.7
arahy.Tifrunner.gnm1.ann1.D1WMTZ Arachis hypogaea HOM05D002373 ORTHO05D008661 4.0e-113 412.1 321 65.7
A05p18620 Brassica napus HOM05D002373 ORTHO05D008661 4.0e-113 412.1 274 74.5
CsaV3_3G019460 Cucumis sativus L. HOM05D002373 ORTHO05D008661 4.0e-113 412.1 324 65.4
BcaC08g44045 Brassica carinata HOM05D002373 ORTHO05D008661 5.2e-113 411.8 291 71.1
QL08p022081 Quercus lobata HOM05D002373 ORTHO05D008661 5.2e-113 411.8 331 65.6
BraA05t20753Z Brassica rapa HOM05D002373 ORTHO05D008661 8.9e-113 411.0 274 74.1
Carub.0001s4228 Capsella rubella HOM05D002373 ORTHO05D008661 1.5e-112 410.2 325 64.9
MELO3C019408.2 Cucumis melo HOM05D002373 ORTHO05D008661 1.5e-112 410.2 324 64.8
Sp1g39670 Schrenkiella parvula HOM05D002373 ORTHO05D008661 1.5e-112 410.2 326 66.6
BolC6t36626H Brassica oleracea HOM05D002373 ORTHO05D008661 2.0e-112 409.8 291 70.8
C06p14460 Brassica napus HOM05D002373 ORTHO05D008661 5.8e-112 408.3 291 70.4
Nitab4.5_0009292g0020 Nicotiana tabacum HOM05D002373 ORTHO05D008661 4.9e-111 405.2 312 66.3
Sed0026190 Sechium edule HOM05D002373 ORTHO05D008661 8.3e-111 404.4 325 64.3
ClCG05G009320 Citrullus lanatus HOM05D002373 ORTHO05D008661 1.4e-110 403.7 336 62.2
BcaB02g10929 Brassica carinata HOM05D002373 ORTHO05D005805 7.0e-110 401.4 324 65.7
CiPaw.11G170200 Carya illinoinensis HOM05D002373 ORTHO05D008661 2.7e-109 399.4 336 63.1
Aqoxy1G02390 Aquilegia oxysepala HOM05D002373 ORTHO05D008661 3.5e-109 399.1 303 68.6
Ca_03504_v3 Cicer arietinum L. HOM05D002373 ORTHO05D008661 6.0e-109 398.3 326 62.9
Atru.BG.257.p Acer truncatum HOM05D002373 ORTHO05D008661 7.8e-109 397.9 251 77.3
SGA_v2.0_scaffold70G23676 Striga asiatica HOM05D002373 ORTHO05D008661 1.7e-108 396.7 346 62.7
TPR.G39017 Trifolium pratense HOM05D002373 ORTHO05D008661 2.3e-108 396.4 271 69.7
Atru.BG.152.p Acer truncatum HOM05D002373 ORTHO05D008661 3.9e-108 395.6 251 76.9
EL10Ac4g08187 Beta vulgaris HOM05D002373 ORTHO05D008661 6.8e-105 384.8 289 66.8
Ah.06g184370 Amaranthus hybridus HOM05D002373 ORTHO05D008661 8.9e-105 384.4 270 70.0
Manes.03G109500 Manihot esculenta HOM05D002373 ORTHO05D008661 1.2e-104 384.0 236 81.8
PGR083G2563 Punica granatum HOM05D002373 ORTHO05D008661 2.6e-104 382.9 336 60.4
AUR62019433 Chenopodium quinoa HOM05D002373 ORTHO05D008661 4.4e-104 382.1 282 68.1
TWI38G1988 Tripterygium wilfordii HOM05D002373 ORTHO05D008661 4.4e-104 382.1 270 73.0
AUR62039201 Chenopodium quinoa HOM05D002373 ORTHO05D008661 5.4e-102 375.2 334 61.1
Hund20000 Selenicereus undatus HOM05D002373 ORTHO05D008661 6.0e-101 371.7 329 59.0
ATR0737G132 Amborella trichopoda HOM05D002373 ORTHO05D008661 2.3e-100 369.8 248 70.6
Nitab4.5_0000332g0080 Nicotiana tabacum HOM05D002373 ORTHO05D008661 1.4e-97 360.5 313 61.7
CDE02G2303 Ceratophyllum demersum HOM05D002373 ORTHO05D008661 8.9e-97 357.8 231 74.0
FAN16G2188 Fragaria x ananassa HOM05D002373 ORTHO05D008661 2.0e-96 356.7 237 72.2
Phvul.005G072600 Phaseolus vulgaris HOM05D002373 ORTHO05D008661 7.6e-96 354.8 236 74.6
Haze_09434 Corylus avellana HOM05D002373 ORTHO05D008661 1.7e-95 353.6 327 58.7
Os01g0747700 Oryza sativa ssp. japonica HOM05D002373 ORTHO05D008661 1.7e-95 353.6 273 63.4
HPP92_024439 Vanilla planifolia HOM05D002373 ORTHO05D008661 1.7e-95 353.6 251 67.3
unitig_26.g9527 Utricularia gibba HOM05D002373 ORTHO05D008661 1.9e-94 350.1 259 66.4
Zm00001eb153060 Zea mays HOM05D002373 ORTHO05D008661 2.4e-94 349.7 258 65.5
Gorai.013G170800 Gossypium raimondii HOM05D002373 ORTHO05D008661 1.3e-92 344.0 212 80.2
Sc03g0010080 Simmondsia chinensis HOM05D002373 ORTHO05D008661 1.7e-92 343.6 263 64.6
Rhsim04G0021500 Rhododendron simsii HOM05D002373 ORTHO05D008661 7.3e-91 338.2 282 64.9
Oeu060559.2 Olea europaea HOM05D002373 ORTHO05D008661 2.1e-90 336.7 397 50.4
PSO541G6350 Papaver somniferum HOM05D002373 ORTHO05D008661 6.2e-90 335.1 268 63.4
FAN21G4050 Fragaria x ananassa HOM05D002373 ORTHO05D008661 2.6e-88 329.7 212 74.5
Pp3c20_21790 Physcomitrium patens HOM05D002373 ORTHO05D008661 6.0e-77 292.0 293 51.9
Gorai.013G169000 Gossypium raimondii HOM05D002373 ORTHO05D008661 1.5e-72 277.3 222 64.9
AagrBONN_evm.TU.Sc2ySwM_344.3401 Anthoceros agrestis HOM05D002373 ORTHO05D008661 5.8e-72 275.4 289 49.1
Glyma.13G276400 Glycine max HOM05D002373 ORTHO05D008661 9.3e-70 268.1 252 57.1
SMO367G1013 Selaginella moellendorffii HOM05D002373 ORTHO05D008661 2.1e-69 266.9 242 55.8
Mapoly0051s0038 Marchantia polymorpha HOM05D002373 ORTHO05D008661 8.7e-68 261.5 299 48.5
Cre12.g502950 Chlamydomonas reinhardtii HOM05D002373 ORTHO05D008661 7.1e-62 241.9 246 51.2
CDE08G0691 Ceratophyllum demersum HOM05D002373 ORTHO05D008661 1.6e-61 240.7 148 76.4
MCO14G219 Micromonas commoda HOM05D002373 ORTHO05D008661 7.9e-53 211.8 308 42.5
CSS0025404 Camellia sinensis var. sinensis HOM05D002373 ORTHO05D008661 1.2e-48 198.0 128 75.8
Thecc.07G090900 Theobroma cacao HOM05D002373 ORTHO05D008661 4.2e-38 162.9 104 76.0
Gohir.D13G152082 Gossypium hirsutum HOM05D002373 ORTHO05D008661 1.7e-31 141.0 88 80.7
Gorai.013G170900 Gossypium raimondii HOM05D002373 ORTHO05D008661 5.0e-31 139.4 88 80.7
Gohir.A13G147066 Gossypium hirsutum HOM05D002373 ORTHO05D008661 1.8e-28 131.0 81 80.2
A01p26780 Brassica napus HOM05D002373 ORTHO05D008661 1.1e-22 111.7 76 72.4
CSS0007182 Camellia sinensis var. sinensis HOM05D002373 ORTHO05D008661 9.4e-22 108.6 75 70.7
CSS0007754 Camellia sinensis var. sinensis HOM05D002373 ORTHO05D008661 9.4e-22 108.6 65 76.9
PRCOL_00005720 Prasinoderma coloniale HOM05D002373 ORTHO05D008661 2.7e-16 90.5 261 29.1
MD11G1248800 Malus domestica HOM05D002373 ORTHO05D008661 3.1e-09 67.0 157 38.9
BcaC05g28656 Brassica carinata HOM05D022203 ORTHO05D024331 7.0e-09 65.9 36 83.3
Atru.chr2.2601 Acer truncatum HOM05D002373 ORTHO05D013107 1.0e-07 62.0 35 77.1


User provided reference genes

Program Settings