Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv20154 Davidia involucrata HOM05D000559 ORTHO05D043461 2.6e-36 154.8 78 100.0
Dinv34053 Davidia involucrata HOM05D000559 ORTHO05D003606 1.3e-19 99.4 111 51.4
CSS0033683 Camellia sinensis var. sinensis HOM05D000559 ORTHO05D003606 2.9e-19 98.2 111 51.4
CSS0034826 Camellia sinensis var. sinensis HOM05D000559 ORTHO05D003606 2.9e-19 98.2 111 51.4
Sc14g0007940 Simmondsia chinensis HOM05D000559 ORTHO05D003606 7.2e-18 93.6 110 51.8
Hma1.2p1_0566F.1_g179930 Hydrangea macrophylla HOM05D000559 ORTHO05D003606 9.5e-18 93.2 109 49.5
TAR371G1256 Trochodendron aralioides HOM05D000559 ORTHO05D003606 1.6e-17 92.4 111 47.7
Psat2g131680 Pisum sativum HOM05D000559 ORTHO05D003606 2.8e-17 91.7 110 48.2
MELO3C009032.2 Cucumis melo HOM05D000559 ORTHO05D003606 4.7e-17 90.9 111 47.7
CsaV3_4G031430 Cucumis sativus L. HOM05D000559 ORTHO05D003606 4.7e-17 90.9 111 47.7
Prupe.1G289300 Prunus persica HOM05D000559 ORTHO05D003606 4.7e-17 90.9 111 46.8
Actinidia31934 Actinidia chinensis HOM05D000559 ORTHO05D003606 8.0e-17 90.1 111 47.7
GSVIVG01012237001 Vitis vinifera HOM05D000559 ORTHO05D003606 8.0e-17 90.1 110 47.3
ClCG04G000590 Citrullus lanatus HOM05D000559 ORTHO05D003606 1.0e-16 89.7 111 46.8
MD13G1060100 Malus domestica HOM05D000559 ORTHO05D003606 1.0e-16 89.7 111 45.9
vmacro01312 Vaccinium macrocarpon HOM05D000559 ORTHO05D003606 1.0e-16 89.7 111 46.8
Medtr5g044990 Medicago truncatula HOM05D000559 ORTHO05D003606 1.4e-16 89.4 110 48.2
Nn4g23479 Nelumbo nucifera HOM05D000559 ORTHO05D003606 1.4e-16 89.4 111 46.8
Ciclev10031077m.g Citrus clementina HOM05D000559 ORTHO05D003606 3.0e-16 88.2 111 47.7
FvH4_4g29720 Fragaria vesca HOM05D000559 ORTHO05D003606 3.0e-16 88.2 111 45.9
Glyma.01G062100 Glycine max HOM05D000559 ORTHO05D003606 3.0e-16 88.2 111 47.7
TPR.G23746 Trifolium pratense HOM05D000559 ORTHO05D003606 3.0e-16 88.2 110 47.3
Thecc.02G327900 Theobroma cacao HOM05D000559 ORTHO05D003606 6.8e-16 87.0 111 46.8
Cfa008864 Carpinus fangiana HOM05D000559 ORTHO05D003606 8.9e-16 86.7 111 46.8
Haze_11887 Corylus avellana HOM05D000559 ORTHO05D003606 8.9e-16 86.7 111 46.8
Lj2g0001921 Lotus japonicus HOM05D000559 ORTHO05D003606 8.9e-16 86.7 112 45.5
Ca_04999_v3 Cicer arietinum L. HOM05D000559 ORTHO05D003606 1.2e-15 86.3 111 45.9
Glyma.02G120300 Glycine max HOM05D000559 ORTHO05D003606 1.2e-15 86.3 111 45.9
Nitab4.5_0000231g0030 Nicotiana tabacum HOM05D000559 ORTHO05D003606 1.2e-15 86.3 110 44.5
Nitab4.5_0007734g0020 Nicotiana tabacum HOM05D000559 ORTHO05D003606 1.2e-15 86.3 110 44.5
Cpa.g.sc1.150 Carica papaya HOM05D000559 ORTHO05D003606 1.5e-15 85.9 111 45.0
FAN12G3939 Fragaria x ananassa HOM05D000559 ORTHO05D003606 1.5e-15 85.9 111 44.1
FAN17G2916 Fragaria x ananassa HOM05D000559 ORTHO05D003606 1.5e-15 85.9 111 44.1
PSO478G4337 Papaver somniferum HOM05D000559 ORTHO05D003606 1.5e-15 85.9 111 45.9
RcHm_v2.0_Chr4g0437971 Rosa chinensis HOM05D000559 ORTHO05D003606 1.5e-15 85.9 111 45.0
Aqoxy6G03036 Aquilegia oxysepala HOM05D000559 ORTHO05D003606 2.0e-15 85.5 111 44.1
MSTRG.770 Avicennia marina HOM05D000559 ORTHO05D003606 2.0e-15 85.5 111 43.2
FAN07G0455 Fragaria x ananassa HOM05D000559 ORTHO05D003606 2.6e-15 85.1 111 44.1
FAN22G1181 Fragaria x ananassa HOM05D000559 ORTHO05D003606 2.6e-15 85.1 111 44.1
Peaxi162Scf00175g00529 Petunia axillaris HOM05D000559 ORTHO05D003606 2.6e-15 85.1 111 43.2
QL03p073770 Quercus lobata HOM05D000559 ORTHO05D003606 2.6e-15 85.1 111 46.8
Rhsim12G0074100 Rhododendron simsii HOM05D000559 ORTHO05D003606 2.6e-15 85.1 113 42.5
Sed0010650 Sechium edule HOM05D000559 ORTHO05D003606 2.6e-15 85.1 111 45.0
CAN.G707.20 Capsicum annuum HOM05D000559 ORTHO05D003606 3.4e-15 84.7 110 42.7
Phvul.003G040700 Phaseolus vulgaris HOM05D000559 ORTHO05D003606 4.4e-15 84.3 112 43.8
TWI75G1874 Tripterygium wilfordii HOM05D000559 ORTHO05D003606 4.4e-15 84.3 111 45.9
arahy.Tifrunner.gnm1.ann1.G665UA Arachis hypogaea HOM05D000559 ORTHO05D003606 5.7e-15 84.0 110 45.5
COL.COLO4_27859 Corchorus olitorius HOM05D000559 ORTHO05D003606 5.7e-15 84.0 111 45.0
DCAR_024129 Daucus carota HOM05D000559 ORTHO05D003606 5.7e-15 84.0 111 45.9
MBI16_g03097_MAGBIO Magnolia biondii HOM05D000559 ORTHO05D003606 5.7e-15 84.0 110 45.5
arahy.Tifrunner.gnm1.ann1.QPXD55 Arachis hypogaea HOM05D000559 ORTHO05D003606 7.5e-15 83.6 110 45.5
Cc11_g11820 Coffea canephora HOM05D000559 ORTHO05D003606 7.5e-15 83.6 110 44.5
Solyc05g012100.3 Solanum lycopersicum HOM05D000559 ORTHO05D003606 7.5e-15 83.6 110 42.7
Sopen05g006890 Solanum pennellii HOM05D000559 ORTHO05D003606 7.5e-15 83.6 110 42.7
PGSC0003DMG400028311 Solanum tuberosum HOM05D000559 ORTHO05D003606 7.5e-15 83.6 110 42.7
EL10Ac6g15017 Beta vulgaris HOM05D000559 ORTHO05D003606 9.8e-15 83.2 110 44.5
Thhalv10018377m.g Eutrema salsugineum HOM05D000559 ORTHO05D003606 9.8e-15 83.2 110 44.5
Carub.0002s1579 Capsella rubella HOM05D000559 ORTHO05D003606 1.3e-14 82.8 110 43.6
Atru.chr11.1605 Acer truncatum HOM05D000559 ORTHO05D003606 2.2e-14 82.0 111 46.8
CARHR062080 Cardamine hirsuta HOM05D000559 ORTHO05D003606 2.2e-14 82.0 110 43.6
Sp5g24260 Schrenkiella parvula HOM05D000559 ORTHO05D003606 2.2e-14 82.0 110 42.7
AT1G69200 Arabidopsis thaliana HOM05D000559 ORTHO05D003606 2.9e-14 81.6 110 42.7
AUR62007900 Chenopodium quinoa HOM05D000559 ORTHO05D003606 2.9e-14 81.6 110 43.6
Duzib251G0905 Durio zibethinus HOM05D000559 ORTHO05D003606 2.9e-14 81.6 111 45.9
Gorai.008G176200 Gossypium raimondii HOM05D000559 ORTHO05D003606 2.9e-14 81.6 112 44.6
VMungo1215G2800 Vigna mungo HOM05D000559 ORTHO05D003606 2.9e-14 81.6 112 42.9
AUR62003083 Chenopodium quinoa HOM05D000559 ORTHO05D003606 3.7e-14 81.3 110 43.6
SGA_v2.0_scaffold16G07806 Striga asiatica HOM05D000559 ORTHO05D003606 3.7e-14 81.3 110 42.7
AL2G28290 Arabidopsis lyrata HOM05D000559 ORTHO05D003606 4.9e-14 80.9 110 41.8
A07p35540 Brassica napus HOM05D000559 ORTHO05D003606 4.9e-14 80.9 109 43.1
BraA07t31142Z Brassica rapa HOM05D000559 ORTHO05D003606 4.9e-14 80.9 109 43.1
Manes.01G026700 Manihot esculenta HOM05D000559 ORTHO05D003606 4.9e-14 80.9 112 42.9
Lj6A777T42 Lonicera japonica HOM05D000559 ORTHO05D003606 6.3e-14 80.5 113 43.4
SalBow2G1719 Salvia bowleyana HOM05D000559 ORTHO05D003606 6.3e-14 80.5 110 43.6
THA.LOC104822007 Tarenaya hassleriana HOM05D000559 ORTHO05D003606 6.3e-14 80.5 110 41.8
PSO017G0012 Papaver somniferum HOM05D000559 ORTHO05D003606 8.3e-14 80.1 111 44.1
Migut.L01175 Erythranthe guttata HOM05D000559 ORTHO05D003606 1.1e-13 79.7 110 40.9
Gohir.A12G160200 Gossypium hirsutum HOM05D000559 ORTHO05D003606 1.1e-13 79.7 112 44.6
PGR102G2894 Punica granatum HOM05D000559 ORTHO05D003606 1.1e-13 79.7 110 44.5
BcaB03g15879 Brassica carinata HOM05D000559 ORTHO05D003606 1.4e-13 79.3 109 43.1
C06p40710 Brassica napus HOM05D000559 ORTHO05D003606 1.4e-13 79.3 109 43.1
Eucgr.B03142 Eucalyptus grandis HOM05D000559 ORTHO05D003606 1.4e-13 79.3 110 43.6
Lalb_Chr17g0341311 Lupinus albus HOM05D000559 ORTHO05D003606 1.4e-13 79.3 110 44.5
Ah.03g138810 Amaranthus hybridus HOM05D000559 ORTHO05D003606 1.8e-13 79.0 110 42.7
Gohir.D12G163600 Gossypium hirsutum HOM05D000559 ORTHO05D003606 1.8e-13 79.0 112 43.8
Potri.008G097300 Populus trichocarpa HOM05D000559 ORTHO05D003606 1.8e-13 79.0 111 41.4
Hund05550 Selenicereus undatus HOM05D000559 ORTHO05D003606 1.8e-13 79.0 110 45.5
unitig_22.g6895 Utricularia gibba HOM05D000559 ORTHO05D003606 2.4e-13 78.6 111 40.5
CDE04G2516 Ceratophyllum demersum HOM05D000559 ORTHO05D003606 4.1e-13 77.8 110 42.7
ATR0827G181 Amborella trichopoda HOM05D000559 ORTHO05D003606 5.4e-13 77.4 109 44.0
BolC6t39361H Brassica oleracea HOM05D000559 ORTHO05D003606 9.2e-13 76.6 109 42.2
Aa31sc367G30 Aethionema arabicum HOM05D000559 ORTHO05D003606 1.2e-12 76.3 109 41.3
CiPaw.05G123900 Carya illinoinensis HOM05D000559 ORTHO05D003606 1.2e-12 76.3 105 43.8
CANSAT56G0948 Cannabis sativa HOM05D000559 ORTHO05D003606 2.7e-12 75.1 111 42.3
CANSAT56G3968 Cannabis sativa HOM05D000559 ORTHO05D003606 2.7e-12 75.1 111 42.3
Os03g0602600 Oryza sativa ssp. japonica HOM05D000559 ORTHO05D003606 5.9e-12 73.9 109 39.4
CDE07G0807 Ceratophyllum demersum HOM05D000559 ORTHO05D003606 7.8e-12 73.6 110 40.9
Zm00001eb050040 Zea mays HOM05D000559 ORTHO05D003606 7.8e-12 73.6 109 41.3
HanXRQChr06g0170451 Helianthus annuus HOM05D000559 ORTHO05D003606 1.0e-11 73.2 109 40.4
Lsat_1_v5_gn_3_53720 Lactuca sativa HOM05D000559 ORTHO05D003606 1.3e-11 72.8 109 42.2
ECA246G4947 Erigeron canadensis HOM05D000559 ORTHO05D003606 6.6e-11 70.5 109 40.4
Sabra08G0073500 Salix brachista HOM05D000559 ORTHO05D003606 8.6e-11 70.1 110 39.1
CAN.G92.16 Capsicum annuum HOM05D000559 ORTHO05D043461 1.2e-07 59.7 45 62.2


User provided reference genes

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