Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv20139 Davidia involucrata HOM05D008924 ORTHO05D010909 1.2e-95 353.2 180 100.0
Dinv00754 Davidia involucrata HOM05D008924 ORTHO05D010909 1.0e-54 217.2 174 67.2
RhsimUnG0149800 Rhododendron simsii HOM05D008924 ORTHO05D010909 1.9e-21 106.7 101 59.4
Hma1.2p1_0473F.1_g160160 Hydrangea macrophylla HOM05D008924 ORTHO05D010909 1.2e-12 77.4 92 50.0
Dinv20135 Davidia involucrata HOM05D008924 ORTHO05D010909 1.6e-12 77.0 69 55.1
Dinv00752 Davidia involucrata HOM05D008924 ORTHO05D010909 3.6e-12 75.9 85 51.8
Dinv20137 Davidia involucrata HOM05D000041 ORTHO05D000061 1.4e-11 73.9 91 47.3
Prupe.1G291000 Prunus persica HOM05D008924 ORTHO05D010909 8.9e-11 71.2 94 46.8
MD11G1154600 Malus domestica HOM05D008924 ORTHO05D010909 1.5e-10 70.5 76 52.6
Manes.05G111400 Manihot esculenta HOM05D008924 ORTHO05D010909 2.6e-10 69.7 94 43.6
TWI31G1119 Tripterygium wilfordii HOM05D008924 ORTHO05D010909 2.6e-10 69.7 110 42.7
COL.COLO4_27839 Corchorus olitorius HOM05D008924 ORTHO05D010909 4.4e-10 68.9 94 46.8
MD03G1131700 Malus domestica HOM05D008924 ORTHO05D010909 7.5e-10 68.2 57 57.9
Potri.T170700 Populus trichocarpa HOM05D008924 ORTHO05D010909 7.5e-10 68.2 82 43.9
Gorai.008G175600 Gossypium raimondii HOM05D008924 ORTHO05D010909 1.7e-09 67.0 58 58.6
Gohir.D12G162950 Gossypium hirsutum HOM05D008924 ORTHO05D010909 2.2e-09 66.6 58 58.6
CAN.G1021.17 Capsicum annuum HOM05D041871 ORTHO05D033998 4.9e-09 65.5 70 45.7
Gohir.A12G159750 Gossypium hirsutum HOM05D008924 ORTHO05D010909 2.4e-08 63.2 58 60.3
Nn4g23515 Nelumbo nucifera HOM05D008924 ORTHO05D010909 2.4e-08 63.2 103 39.8
FvH4_4g29550 Fragaria vesca HOM05D008924 ORTHO05D010909 3.2e-08 62.8 63 50.8
FAN12G0738 Fragaria x ananassa HOM05D008924 ORTHO05D010909 7.0e-08 61.6 61 57.4
QL11p007253 Quercus lobata HOM05D008924 ORTHO05D010909 7.0e-08 61.6 66 48.5
CARHR262190 Cardamine hirsuta HOM05D010754 ORTHO05D011439 9.2e-08 61.2 79 45.6
FAN07G2892 Fragaria x ananassa HOM05D008924 ORTHO05D010909 9.2e-08 61.2 101 40.6
PGSC0003DMG400024399 Solanum tuberosum HOM05D008924 ORTHO05D011439 1.6e-07 60.5 62 51.6
ClCG05G023580 Citrullus lanatus HOM05D036475 ORTHO05D034695 2.0e-07 60.1 60 55.0
Prupe.5G145700 Prunus persica HOM05D008924 ORTHO05D010909 2.0e-07 60.1 94 44.7
CiPaw.06G141800 Carya illinoinensis HOM05D033353 ORTHO05D010909 2.7e-07 59.7 115 35.7
Eucgr.G02418 Eucalyptus grandis HOM05D008924 ORTHO05D010909 6.0e-07 58.5 68 45.6
RcHm_v2.0_Chr4g0418511 Rosa chinensis HOM05D008924 ORTHO05D010909 1.3e-06 57.4 54 55.6
Cfa021028 Carpinus fangiana HOM05D008924 ORTHO05D010909 1.7e-06 57.0 69 49.3
Dinv34029 Davidia involucrata HOM05D041871 ORTHO05D033998 1.7e-06 57.0 52 53.8
Dinv34031 Davidia involucrata HOM05D041871 ORTHO05D033998 1.7e-06 57.0 52 53.8
Prupe.5G145500 Prunus persica HOM05D008924 ORTHO05D010909 1.7e-06 57.0 51 51.0
Sp7g02110 Schrenkiella parvula HOM05D010754 ORTHO05D011439 1.7e-06 57.0 69 43.5
Sc11g0002430 Simmondsia chinensis HOM05D008924 ORTHO05D010909 3.0e-06 56.2 93 39.8
Eucgr.H03399 Eucalyptus grandis HOM05D040847 ORTHO05D010909 3.9e-06 55.8 96 37.5
Thecc.02G325400 Theobroma cacao HOM05D008924 ORTHO05D010909 3.9e-06 55.8 57 59.6
C04p46500 Brassica napus HOM05D010754 ORTHO05D011439 5.0e-06 55.5 68 44.1
Oeu014893.2 Olea europaea HOM05D008924 ORTHO05D011439 5.0e-06 55.5 86 43.0
MELO3C012162.2 Cucumis melo HOM05D036475 ORTHO05D034695 8.6e-06 54.7 61 52.5


User provided reference genes

Program Settings