Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv20113 Davidia involucrata HOM05D002234 ORTHO05D002254 8.3e-70 266.9 136 100.0
Actinidia26889 Actinidia chinensis HOM05D002234 ORTHO05D002254 3.8e-14 82.0 142 42.3
Cfa000143 Carpinus fangiana HOM05D002234 ORTHO05D002254 1.1e-13 80.5 90 57.8
Cfa000141 Carpinus fangiana HOM05D002234 ORTHO05D002254 4.2e-13 78.6 90 57.8
Dinv13947 Davidia involucrata HOM05D002234 ORTHO05D002254 4.2e-13 78.6 84 61.9
Oeu051879.2 Olea europaea HOM05D002234 ORTHO05D002254 7.9e-12 74.3 72 62.5
Oeu026233.1 Olea europaea HOM05D002234 ORTHO05D002254 1.0e-11 73.9 83 57.8
QL05p070215 Quercus lobata HOM05D002234 ORTHO05D002254 3.0e-11 72.4 75 56.0
Lj2A263T48 Lonicera japonica HOM05D002234 ORTHO05D002254 1.1e-10 70.5 84 52.4
Cc09_g01130 Coffea canephora HOM05D002234 ORTHO05D002254 2.6e-10 69.3 80 56.2
QL05p070719 Quercus lobata HOM05D002234 ORTHO05D002254 3.3e-10 68.9 75 54.7
CAN.G1014.51 Capsicum annuum HOM05D002234 ORTHO05D002254 1.4e-08 63.5 82 53.7
Nitab4.5_0004821g0050 Nicotiana tabacum HOM05D002234 ORTHO05D002254 1.4e-08 63.5 82 52.4
TWI38G0652 Tripterygium wilfordii HOM05D002234 ORTHO05D002254 1.4e-08 63.5 71 59.2
PGSC0003DMG400016727 Solanum tuberosum HOM05D002234 ORTHO05D002254 3.1e-08 62.4 86 50.0
CANSAT56G3028 Cannabis sativa HOM05D002234 ORTHO05D002254 4.1e-08 62.0 82 53.7
CANSAT56G3737 Cannabis sativa HOM05D002234 ORTHO05D002254 4.1e-08 62.0 82 53.7
CiPaw.09G099600 Carya illinoinensis HOM05D002234 ORTHO05D002254 4.1e-08 62.0 75 56.0
Peaxi162Scf00708g00012 Petunia axillaris HOM05D002234 ORTHO05D002254 4.1e-08 62.0 86 47.7
Prupe.4G014000 Prunus persica HOM05D002234 ORTHO05D002254 4.1e-08 62.0 72 54.2
vmacro03660 Vaccinium macrocarpon HOM05D002234 ORTHO05D002254 5.3e-08 61.6 67 61.2
Duzib235G1028 Durio zibethinus HOM05D002234 ORTHO05D002254 7.0e-08 61.2 83 50.6
MSTRG.14623 Avicennia marina HOM05D002234 ORTHO05D002254 9.1e-08 60.8 78 50.0
Sopen02g025810 Solanum pennellii HOM05D002234 ORTHO05D002254 1.2e-07 60.5 82 51.2
QL05p070232 Quercus lobata HOM05D002234 ORTHO05D002254 1.5e-07 60.1 86 45.3
QL05p070734 Quercus lobata HOM05D002234 ORTHO05D002254 1.5e-07 60.1 86 45.3
Solyc02g081170.4 Solanum lycopersicum HOM05D002234 ORTHO05D002254 2.0e-07 59.7 82 51.2
Ciclev10015934m.g Citrus clementina HOM05D002234 ORTHO05D002254 2.6e-07 59.3 75 52.0
Migut.H01594 Erythranthe guttata HOM05D002234 ORTHO05D002254 2.6e-07 59.3 76 51.3
Atru.chr10.2317 Acer truncatum HOM05D002234 ORTHO05D002254 5.9e-07 58.2 72 54.2
COL.COLO4_31843 Corchorus olitorius HOM05D002234 ORTHO05D002254 7.7e-07 57.8 85 50.6
RcHm_v2.0_Chr5g0001851 Rosa chinensis HOM05D002234 ORTHO05D002254 7.7e-07 57.8 58 56.9
Rhsim13G0149600 Rhododendron simsii HOM05D002234 ORTHO05D002254 1.7e-06 56.6 63 60.3
Thecc.06G229400 Theobroma cacao HOM05D002234 ORTHO05D002254 1.7e-06 56.6 77 51.9
CSS0001852 Camellia sinensis var. sinensis HOM05D002234 ORTHO05D002254 3.8e-06 55.5 81 50.6
Cpa.g.c30992.3 Carica papaya HOM05D002234 ORTHO05D002254 3.8e-06 55.5 67 50.7
Cfa000140 Carpinus fangiana HOM05D002234 ORTHO05D002254 3.8e-06 55.5 93 41.9
MELO3C007423.2 Cucumis melo HOM05D002234 ORTHO05D002254 3.8e-06 55.5 63 61.9
Potri.004G003200 Populus trichocarpa HOM05D002234 ORTHO05D002254 3.8e-06 55.5 64 56.2
HanXRQChr17g0558841 Helianthus annuus HOM05D002234 ORTHO05D002254 5.0e-06 55.1 76 48.7
Sabra04G0001800 Salix brachista HOM05D002234 ORTHO05D002254 6.5e-06 54.7 70 54.3
Lj1A1237T45 Lonicera japonica HOM05D002234 ORTHO05D002254 8.5e-06 54.3 73 52.1


User provided reference genes

Program Settings