Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv20053 Davidia involucrata HOM05D006843 ORTHO05D008517 1.9e-101 372.5 186 100.0
MELO3C013160.2 Cucumis melo HOM05D006843 ORTHO05D008517 6.6e-17 91.7 117 43.6
CsaV3_7G021850 Cucumis sativus L. HOM05D006843 ORTHO05D008517 8.6e-17 91.3 117 42.7
Prupe.4G214500 Prunus persica HOM05D006843 ORTHO05D008517 8.6e-17 91.3 118 46.6
Hma1.2p1_0673F.1_g201390 Hydrangea macrophylla HOM05D006843 ORTHO05D008517 1.1e-16 90.9 120 43.3
Hma1.2p1_0673F.1_g201400 Hydrangea macrophylla HOM05D006843 ORTHO05D008517 1.1e-16 90.9 120 43.3
Peaxi162Scf00235g00218 Petunia axillaris HOM05D006843 ORTHO05D008517 3.3e-16 89.4 119 43.7
TAR624G1415 Trochodendron aralioides HOM05D006843 ORTHO05D008517 3.3e-16 89.4 120 44.2
Gohir.A01G079900 Gossypium hirsutum HOM05D006843 ORTHO05D008517 1.6e-15 87.0 120 41.7
Cpa.g.sc12.302 Carica papaya HOM05D006843 ORTHO05D008517 2.1e-15 86.7 120 44.2
Gohir.D01G067100 Gossypium hirsutum HOM05D006843 ORTHO05D008517 2.1e-15 86.7 120 41.7
GSVIVG01037656001 Vitis vinifera HOM05D006843 ORTHO05D008517 2.1e-15 86.7 117 44.4
ClCG09G010830 Citrullus lanatus HOM05D006843 ORTHO05D008517 3.6e-15 85.9 117 41.0
Actinidia05093 Actinidia chinensis HOM05D006843 ORTHO05D008517 4.7e-15 85.5 116 42.2
Glyma.14G022900 Glycine max HOM05D006843 ORTHO05D008517 4.7e-15 85.5 112 42.9
Thecc.07G035800 Theobroma cacao HOM05D006843 ORTHO05D008517 4.7e-15 85.5 118 43.2
CSS0043197 Camellia sinensis var. sinensis HOM05D006843 ORTHO05D008517 6.1e-15 85.1 117 40.2
AUR62015782 Chenopodium quinoa HOM05D006843 ORTHO05D008517 6.1e-15 85.1 117 40.2
Dinv22258 Davidia involucrata HOM05D006843 ORTHO05D008517 6.1e-15 85.1 150 37.3
Duzib268G1400 Durio zibethinus HOM05D006843 ORTHO05D008517 1.0e-14 84.3 118 42.4
LjContig00272g0007634 Lotus japonicus HOM05D006843 ORTHO05D008517 1.0e-14 84.3 117 45.3
RcHm_v2.0_Chr5g0040061 Rosa chinensis HOM05D006843 ORTHO05D008517 1.0e-14 84.3 124 40.3
CANSAT11G0475 Cannabis sativa HOM05D006843 ORTHO05D008517 1.4e-14 84.0 120 42.5
QL08p010009 Quercus lobata HOM05D006843 ORTHO05D008517 1.4e-14 84.0 119 43.7
Cfa020337 Carpinus fangiana HOM05D006843 ORTHO05D008517 1.8e-14 83.6 127 39.4
Eucgr.F00758 Eucalyptus grandis HOM05D006843 ORTHO05D008517 1.8e-14 83.6 120 42.5
MD11G1217200 Malus domestica HOM05D006843 ORTHO05D008517 2.3e-14 83.2 117 43.6
Medtr5g092970 Medicago truncatula HOM05D006843 ORTHO05D008517 2.3e-14 83.2 112 42.0
Nn1g03519 Nelumbo nucifera HOM05D006843 ORTHO05D008517 2.3e-14 83.2 122 42.6
Sed0013659 Sechium edule HOM05D006843 ORTHO05D008517 3.1e-14 82.8 111 41.4
AT4G26980 Arabidopsis thaliana HOM05D006843 ORTHO05D008517 4.0e-14 82.4 119 43.7
Haze_09681 Corylus avellana HOM05D006843 ORTHO05D008517 4.0e-14 82.4 127 39.4
FAN16G2069 Fragaria x ananassa HOM05D006843 ORTHO05D008517 4.0e-14 82.4 124 39.5
Rhsim06G0217400 Rhododendron simsii HOM05D006843 ORTHO05D008517 4.0e-14 82.4 118 43.2
C07p55080 Brassica napus HOM05D006843 ORTHO05D008517 5.2e-14 82.0 119 41.2
Glyma.02G291800 Glycine max HOM05D006843 ORTHO05D008517 6.8e-14 81.6 112 41.1
Gorai.002G089000 Gossypium raimondii HOM05D006843 ORTHO05D008517 6.8e-14 81.6 120 40.0
ATR0490G005 Amborella trichopoda HOM05D006843 ORTHO05D008517 8.9e-14 81.3 123 39.0
BolC7t46005H Brassica oleracea HOM05D006843 ORTHO05D008517 8.9e-14 81.3 116 41.4
Manes.03G129700 Manihot esculenta HOM05D006843 ORTHO05D008517 1.2e-13 80.9 119 42.0
THA.LOC104809268 Tarenaya hassleriana HOM05D006843 ORTHO05D008517 1.2e-13 80.9 121 41.3
A03p56990 Brassica napus HOM05D006843 ORTHO05D008517 2.0e-13 80.1 120 41.7
BraA03t14769Z Brassica rapa HOM05D006843 ORTHO05D008517 2.0e-13 80.1 120 41.7
Aa31LG5G10440 Aethionema arabicum HOM05D006843 ORTHO05D008517 2.6e-13 79.7 141 39.0
arahy.Tifrunner.gnm1.ann1.Q92UKX Arachis hypogaea HOM05D006843 ORTHO05D008517 2.6e-13 79.7 113 44.2
Ciclev10008752m.g Citrus clementina HOM05D006843 ORTHO05D008517 2.6e-13 79.7 118 39.0
FAN25G2076 Fragaria x ananassa HOM05D006843 ORTHO05D008517 2.6e-13 79.7 123 39.0
SGA_v2.0_scaffold165G38275 Striga asiatica HOM05D006843 ORTHO05D008517 3.4e-13 79.3 119 42.0
Cc05_g13830 Coffea canephora HOM05D006843 ORTHO05D008517 4.4e-13 79.0 113 38.9
FvH4_3g22820 Fragaria vesca HOM05D006843 ORTHO05D008517 4.4e-13 79.0 124 37.9
TPR.G1211 Trifolium pratense HOM05D006843 ORTHO05D008517 4.4e-13 79.0 116 41.4
BcaC06g32719 Brassica carinata HOM05D006843 ORTHO05D008517 5.8e-13 78.6 122 41.0
AUR62020435 Chenopodium quinoa HOM05D006843 ORTHO05D008517 5.8e-13 78.6 124 37.9
Nitab4.5_0003495g0070 Nicotiana tabacum HOM05D006843 ORTHO05D008517 5.8e-13 78.6 121 39.7
arahy.Tifrunner.gnm1.ann1.J1CT6Y Arachis hypogaea HOM05D006843 ORTHO05D008517 7.5e-13 78.2 113 43.4
Ah.04g165900 Amaranthus hybridus HOM05D006843 ORTHO05D008517 1.3e-12 77.4 120 40.0
AL7G25850 Arabidopsis lyrata HOM05D006843 ORTHO05D008517 1.3e-12 77.4 119 42.0
Carub.0007s1386 Capsella rubella HOM05D006843 ORTHO05D008517 1.3e-12 77.4 117 40.2
Thhalv10025611m.g Eutrema salsugineum HOM05D006843 ORTHO05D008517 1.3e-12 77.4 120 40.0
Lalb_Chr04g0248381 Lupinus albus HOM05D006843 ORTHO05D008517 1.3e-12 77.4 115 41.7
Phvul.008G268300 Phaseolus vulgaris HOM05D006843 ORTHO05D008517 1.7e-12 77.0 115 41.7
DCAR_012722 Daucus carota HOM05D006843 ORTHO05D008517 2.2e-12 76.6 116 39.7
Solyc07g064630.4 Solanum lycopersicum HOM05D006843 ORTHO05D008517 2.2e-12 76.6 119 37.0
Sopen07g032830 Solanum pennellii HOM05D006843 ORTHO05D008517 2.2e-12 76.6 119 37.0
TWI39G1240 Tripterygium wilfordii HOM05D006843 ORTHO05D008517 2.2e-12 76.6 117 39.3
arahy.Tifrunner.gnm1.ann1.0IA02T Arachis hypogaea HOM05D006843 ORTHO05D008517 2.9e-12 76.3 113 43.4
arahy.Tifrunner.gnm1.ann1.57CCTN Arachis hypogaea HOM05D006843 ORTHO05D008517 2.9e-12 76.3 113 43.4
arahy.Tifrunner.gnm1.ann1.BV1YAY Arachis hypogaea HOM05D006843 ORTHO05D008517 2.9e-12 76.3 113 43.4
arahy.Tifrunner.gnm1.ann1.H57FKH Arachis hypogaea HOM05D006843 ORTHO05D008517 2.9e-12 76.3 113 43.4
MBI18_g14135_MAGBIO Magnolia biondii HOM05D006843 ORTHO05D008517 2.9e-12 76.3 119 39.5
Nitab4.5_0007360g0010 Nicotiana tabacum HOM05D006843 ORTHO05D008517 2.9e-12 76.3 119 40.3
Psat2g011720 Pisum sativum HOM05D006843 ORTHO05D008517 2.9e-12 76.3 125 40.0
MSTRG.6924 Avicennia marina HOM05D006843 ORTHO05D008517 3.7e-12 75.9 130 35.4
PGR083G2310 Punica granatum HOM05D006843 ORTHO05D008517 3.7e-12 75.9 119 37.8
CARHR234590 Cardamine hirsuta HOM05D006843 ORTHO05D008517 4.9e-12 75.5 119 40.3
PGSC0003DMG402022316 Solanum tuberosum HOM05D006843 ORTHO05D008517 4.9e-12 75.5 119 37.0
Ca_06326_v3 Cicer arietinum L. HOM05D006843 ORTHO05D008517 6.4e-12 75.1 115 40.0
Migut.M01756 Erythranthe guttata HOM05D006843 ORTHO05D008517 6.4e-12 75.1 119 39.5
VMungo0647G1675 Vigna mungo HOM05D006843 ORTHO05D008517 6.4e-12 75.1 114 42.1
CAN.G337.136 Capsicum annuum HOM05D006843 ORTHO05D008517 8.3e-12 74.7 122 38.5
Lsat_1_v5_gn_7_109981 Lactuca sativa HOM05D006843 ORTHO05D008517 8.3e-12 74.7 124 38.7
Lj8A169G88 Lonicera japonica HOM05D006843 ORTHO05D008517 1.1e-11 74.3 124 37.9
Aqoxy4G01855 Aquilegia oxysepala HOM05D006843 ORTHO05D008517 1.4e-11 73.9 121 38.0
CiPaw.11G190100 Carya illinoinensis HOM05D006843 ORTHO05D008517 2.4e-11 73.2 119 37.0
PSO063G3629 Papaver somniferum HOM05D006843 ORTHO05D008517 5.4e-11 72.0 107 42.1
Sc03g0008560 Simmondsia chinensis HOM05D006843 ORTHO05D008517 9.2e-11 71.2 120 36.7
ECA236G1023 Erigeron canadensis HOM05D006843 ORTHO05D008517 1.6e-10 70.5 120 36.7
PSO170G2271 Papaver somniferum HOM05D006843 ORTHO05D008517 1.6e-10 70.5 107 42.1
unitig_8.g4621 Utricularia gibba HOM05D006843 ORTHO05D008517 3.5e-10 69.3 144 34.7
CiPaw.12G130200 Carya illinoinensis HOM05D006843 ORTHO05D008517 4.6e-10 68.9 121 36.4
Potri.011G090700 Populus trichocarpa HOM05D006843 ORTHO05D008517 4.6e-10 68.9 117 35.9
Sabra11G0086300 Salix brachista HOM05D006843 ORTHO05D008517 6.0e-10 68.6 119 37.0
EL10Ac4g07802 Beta vulgaris HOM05D006843 ORTHO05D008517 1.0e-09 67.8 131 35.9
Zm00001eb224560 Zea mays HOM05D006843 ORTHO05D008517 1.7e-09 67.0 125 34.4
HPP92_013325 Vanilla planifolia HOM05D006843 ORTHO05D008517 2.3e-09 66.6 128 35.9
HanXRQChr11g0337271 Helianthus annuus HOM05D006843 ORTHO05D008517 3.9e-09 65.9 120 36.7
Mapoly0001s0246 Marchantia polymorpha HOM05D006843 ORTHO05D008517 3.9e-09 65.9 119 33.6
Zm00001eb273720 Zea mays HOM05D006843 ORTHO05D008517 1.2e-07 60.8 122 36.9
CBR_g34195 Chara braunii HOM05D006843 ORTHO05D008517 4.0e-06 55.8 65 43.1
Pp3c9_17980 Physcomitrium patens HOM05D006843 ORTHO05D008517 4.0e-06 55.8 124 35.5


User provided reference genes

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