Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv20022 Davidia involucrata HOM05D003755 ORTHO05D004385 1.8e-188 662.5 365 100.0
Dinv17826 Davidia involucrata HOM05D003755 ORTHO05D004385 9.2e-132 474.2 278 86.3
Hma1.2p1_0091F.1_g046190 Hydrangea macrophylla HOM05D003755 ORTHO05D004385 9.6e-121 437.6 355 69.3
Cpa.g.sc198.13 Carica papaya HOM05D003755 ORTHO05D004385 1.3e-117 427.2 309 69.3
Thecc.06G215100 Theobroma cacao HOM05D003755 ORTHO05D004385 6.0e-115 418.3 276 73.9
Duzib192G0935 Durio zibethinus HOM05D003755 ORTHO05D004385 2.5e-113 412.9 275 73.8
TAR626G0320 Trochodendron aralioides HOM05D003755 ORTHO05D004385 5.6e-113 411.8 305 69.2
Atru.chr10.2154 Acer truncatum HOM05D003755 ORTHO05D004385 1.6e-112 410.2 292 69.9
CSS0017235 Camellia sinensis var. sinensis HOM05D003755 ORTHO05D004385 2.8e-112 409.5 350 67.7
Ciclev10015811m.g Citrus clementina HOM05D003755 ORTHO05D004385 2.8e-112 409.5 278 71.9
Duzib160G0429 Durio zibethinus HOM05D003755 ORTHO05D004385 3.6e-112 409.1 301 69.1
Manes.16G011500 Manihot esculenta HOM05D003755 ORTHO05D004385 4.0e-111 405.6 279 73.1
Phvul.007G053000 Phaseolus vulgaris HOM05D003755 ORTHO05D004385 9.0e-111 404.4 281 71.2
PGR004G2273 Punica granatum HOM05D003755 ORTHO05D004385 9.0e-111 404.4 276 72.1
VMungo0720G2911 Vigna mungo HOM05D003755 ORTHO05D004385 1.2e-110 404.1 281 70.1
ClCG01G022150 Citrullus lanatus HOM05D003755 ORTHO05D004385 2.0e-110 403.3 280 70.0
TWI38G1592 Tripterygium wilfordii HOM05D003755 ORTHO05D004385 4.5e-110 402.1 306 66.7
MBI18_g01410_MAGBIO Magnolia biondii HOM05D003755 ORTHO05D004385 5.8e-110 401.7 308 65.6
TWI38G1222 Tripterygium wilfordii HOM05D003755 ORTHO05D004385 5.8e-110 401.7 278 69.1
Aqoxy4G01977 Aquilegia oxysepala HOM05D003755 ORTHO05D004385 7.6e-110 401.4 278 71.2
CANSAT56G3751 Cannabis sativa HOM05D003755 ORTHO05D004385 9.9e-110 401.0 309 66.7
CSS0014334 Camellia sinensis var. sinensis HOM05D003755 ORTHO05D004385 1.7e-109 400.2 324 72.5
Gohir.A06G145950 Gossypium hirsutum HOM05D003755 ORTHO05D004385 1.7e-109 400.2 280 71.1
Potri.011G025700 Populus trichocarpa HOM05D003755 ORTHO05D004385 3.8e-109 399.1 279 71.0
Eucgr.E04113 Eucalyptus grandis HOM05D003755 ORTHO05D004385 4.9e-109 398.7 309 67.0
Glyma.10G251600 Glycine max HOM05D003755 ORTHO05D004385 8.4e-109 397.9 313 64.9
Sabra11G0016200 Salix brachista HOM05D003755 ORTHO05D004385 4.2e-108 395.6 308 68.2
Sabra11G0021900 Salix brachista HOM05D003755 ORTHO05D004385 4.2e-108 395.6 308 68.2
ECA234G3589 Erigeron canadensis HOM05D003755 ORTHO05D004385 9.3e-108 394.4 276 71.4
Medtr1g105470 Medicago truncatula HOM05D003755 ORTHO05D004385 9.3e-108 394.4 281 70.5
MELO3C007374.2 Cucumis melo HOM05D003755 ORTHO05D004385 1.2e-107 394.0 309 65.4
Glyma.20G141900 Glycine max HOM05D003755 ORTHO05D004385 2.1e-107 393.3 281 68.3
CsaV3_6G049210 Cucumis sativus L. HOM05D003755 ORTHO05D004385 3.5e-107 392.5 309 65.0
Atru.chr10.2153 Acer truncatum HOM05D003755 ORTHO05D004385 1.3e-106 390.6 284 69.0
Cfa000266 Carpinus fangiana HOM05D003755 ORTHO05D004385 1.3e-106 390.6 279 69.5
CiPaw.09G088000 Carya illinoinensis HOM05D003755 ORTHO05D004385 2.3e-106 389.8 319 63.9
PSO541G6483 Papaver somniferum HOM05D003755 ORTHO05D004385 2.3e-106 389.8 308 66.9
Lsat_1_v5_gn_4_58721 Lactuca sativa HOM05D003755 ORTHO05D004385 3.0e-106 389.4 314 64.3
Lj5g0019176 Lotus japonicus HOM05D003755 ORTHO05D004385 3.0e-106 389.4 281 67.6
PSO675G2634 Papaver somniferum HOM05D003755 ORTHO05D004385 3.0e-106 389.4 308 66.6
Psat6g210560 Pisum sativum HOM05D003755 ORTHO05D004385 5.1e-106 388.7 281 69.4
FAN25G0829 Fragaria x ananassa HOM05D003755 ORTHO05D004385 6.7e-106 388.3 280 69.3
FAN21G0915 Fragaria x ananassa HOM05D003755 ORTHO05D004385 8.7e-106 387.9 280 69.3
Prupe.4G025400 Prunus persica HOM05D003755 ORTHO05D004385 2.5e-105 386.3 280 69.6
Ca_10975_v3 Cicer arietinum L. HOM05D003755 ORTHO05D004385 3.3e-105 386.0 281 68.3
MD00G1180300 Malus domestica HOM05D003755 ORTHO05D004385 3.3e-105 386.0 279 68.1
Oeu016525.1 Olea europaea HOM05D003755 ORTHO05D004385 1.3e-104 384.0 276 68.8
QL05p074736 Quercus lobata HOM05D003755 ORTHO05D004385 2.1e-104 383.3 279 67.4
FvH4_3g02600 Fragaria vesca HOM05D003755 ORTHO05D004385 2.8e-104 382.9 279 69.2
THA.LOC104823520 Tarenaya hassleriana HOM05D003755 ORTHO05D004385 2.8e-104 382.9 277 65.3
TAR624G0284 Trochodendron aralioides HOM05D003755 ORTHO05D004385 8.1e-104 381.3 277 69.0
Gohir.D05G171400 Gossypium hirsutum HOM05D003755 ORTHO05D004385 2.4e-103 379.8 280 66.8
COL.COLO4_31737 Corchorus olitorius HOM05D003755 ORTHO05D004385 4.0e-103 379.0 267 69.3
THA.LOC104809515 Tarenaya hassleriana HOM05D003755 ORTHO05D004385 4.0e-103 379.0 277 65.3
AL2G14320 Arabidopsis lyrata HOM05D003755 ORTHO05D004385 1.2e-102 377.5 305 63.3
AT1G61790 Arabidopsis thaliana HOM05D003755 ORTHO05D004385 2.6e-102 376.3 305 65.2
CARHR050550 Cardamine hirsuta HOM05D003755 ORTHO05D004385 2.6e-102 376.3 306 63.4
Gohir.A05G168300 Gossypium hirsutum HOM05D003755 ORTHO05D004385 2.6e-102 376.3 280 66.1
MD10G1315200 Malus domestica HOM05D003755 ORTHO05D004385 7.6e-102 374.8 279 67.4
Aa31LG2G9060 Aethionema arabicum HOM05D003755 ORTHO05D004385 1.0e-101 374.4 307 59.6
Carub.0002s0327 Capsella rubella HOM05D003755 ORTHO05D004385 1.0e-101 374.4 305 63.6
Nn1g07049 Nelumbo nucifera HOM05D003755 ORTHO05D004385 4.9e-101 372.1 281 66.5
AUR62012654 Chenopodium quinoa HOM05D003755 ORTHO05D004385 6.5e-101 371.7 275 66.2
MSTRG.14647 Avicennia marina HOM05D003755 ORTHO05D004385 1.9e-100 370.2 281 65.1
Sp2g02750 Schrenkiella parvula HOM05D003755 ORTHO05D004385 3.2e-100 369.4 305 59.0
Solyc03g031790.1 Solanum lycopersicum HOM05D003755 ORTHO05D004385 3.2e-100 369.4 278 66.2
Thhalv10023566m.g Eutrema salsugineum HOM05D003755 ORTHO05D004385 1.2e-99 367.5 308 58.4
Sopen03g005650 Solanum pennellii HOM05D003755 ORTHO05D004385 1.6e-99 367.1 278 65.8
BcaB04g20374 Brassica carinata HOM05D003755 ORTHO05D004385 3.5e-99 365.9 277 63.2
CDE05G0706 Ceratophyllum demersum HOM05D003755 ORTHO05D004385 6.0e-99 365.2 278 66.5
Cc02_g11630 Coffea canephora HOM05D003755 ORTHO05D004385 6.0e-99 365.2 280 64.3
BcaC06g31863 Brassica carinata HOM05D003755 ORTHO05D004385 1.0e-98 364.4 277 62.8
Migut.H01555 Erythranthe guttata HOM05D003755 ORTHO05D004385 2.3e-98 363.2 277 64.3
Gohir.D09G069500 Gossypium hirsutum HOM05D003755 ORTHO05D004385 2.3e-98 363.2 276 65.2
Gorai.006G083700 Gossypium raimondii HOM05D003755 ORTHO05D004385 2.3e-98 363.2 276 65.2
Manes.17G035900 Manihot esculenta HOM05D003755 ORTHO05D004385 2.3e-98 363.2 279 65.9
Lalb_Chr21g0307811 Lupinus albus HOM05D003755 ORTHO05D004385 3.0e-98 362.8 315 61.3
PGSC0003DMG400024071 Solanum tuberosum HOM05D003755 ORTHO05D004385 3.9e-98 362.5 278 64.4
BcaC02g10535 Brassica carinata HOM05D003755 ORTHO05D004385 6.7e-98 361.7 276 62.7
C04p27760 Brassica napus HOM05D003755 ORTHO05D004385 6.7e-98 361.7 276 62.7
BolC4t24319H Brassica oleracea HOM05D003755 ORTHO05D004385 6.7e-98 361.7 276 62.7
Gohir.D06G152000 Gossypium hirsutum HOM05D003755 ORTHO05D004385 2.5e-97 359.8 247 70.9
A01p30670 Brassica napus HOM05D003755 ORTHO05D004385 3.3e-97 359.4 276 62.7
A01p30690 Brassica napus HOM05D003755 ORTHO05D004385 3.3e-97 359.4 276 62.7
BraA01t03198Z Brassica rapa HOM05D003755 ORTHO05D004385 3.3e-97 359.4 276 62.7
C01p39060 Brassica napus HOM05D003755 ORTHO05D004385 9.6e-97 357.8 314 57.3
BolC1t03856H Brassica oleracea HOM05D003755 ORTHO05D004385 9.6e-97 357.8 314 57.3
Ah.09g235250 Amaranthus hybridus HOM05D003755 ORTHO05D004385 2.1e-96 356.7 312 60.6
DCAR_028162 Daucus carota HOM05D003755 ORTHO05D004385 2.1e-96 356.7 278 65.5
Peaxi162Scf00079g00073 Petunia axillaris HOM05D003755 ORTHO05D004385 2.1e-96 356.7 278 63.3
Lj1A1226T40 Lonicera japonica HOM05D003755 ORTHO05D004385 3.7e-96 355.9 249 69.1
Sc05g0008910 Simmondsia chinensis HOM05D003755 ORTHO05D004385 4.8e-96 355.5 277 64.6
Nitab4.5_0000091g0500 Nicotiana tabacum HOM05D003755 ORTHO05D004385 1.8e-95 353.6 280 61.8
unitig_26.g9395 Utricularia gibba HOM05D003755 ORTHO05D004385 3.1e-95 352.8 280 61.4
Sed0012988 Sechium edule HOM05D003755 ORTHO05D004385 1.0e-93 347.8 277 62.1
Lj2A272T65 Lonicera japonica HOM05D003755 ORTHO05D004385 2.9e-93 346.3 307 62.2
EL10Ac8g19999 Beta vulgaris HOM05D003755 ORTHO05D004385 3.8e-93 345.9 276 64.1
ATR0109G031 Amborella trichopoda HOM05D003755 ORTHO05D004385 8.4e-93 344.7 307 56.7
TWI38G0036 Tripterygium wilfordii HOM05D003755 ORTHO05D004385 8.7e-90 334.7 277 61.7
Rhsim13G0157400 Rhododendron simsii HOM05D003755 ORTHO05D004385 5.7e-89 332.0 235 68.9
CDE11G0393 Ceratophyllum demersum HOM05D003755 ORTHO05D004385 9.7e-89 331.3 245 67.3
Gohir.A09G069600 Gossypium hirsutum HOM05D003755 ORTHO05D004385 3.7e-88 329.3 245 65.3
Thhalv10008090m.g Eutrema salsugineum HOM05D003755 ORTHO05D004385 3.1e-87 326.2 307 54.1
Os03g0565100 Oryza sativa ssp. japonica HOM05D003755 ORTHO05D004385 4.1e-87 325.9 275 57.8
Nitab4.5_0005793g0040 Nicotiana tabacum HOM05D003755 ORTHO05D004385 7.7e-86 321.6 338 52.1
Haze_06749 Corylus avellana HOM05D003755 ORTHO05D004385 1.0e-85 321.2 231 68.0
Gorai.010G177400 Gossypium raimondii HOM05D003755 ORTHO05D004385 1.0e-85 321.2 280 60.4
SEGI_11297 Sequoiadendron giganteum HOM05D003755 ORTHO05D004385 1.3e-85 320.9 277 59.9
Sp1g10170 Schrenkiella parvula HOM05D003755 ORTHO05D004385 1.7e-85 320.5 277 56.7
Sopen10g003960 Solanum pennellii HOM05D003755 ORTHO05D004385 1.9e-84 317.0 277 57.8
Solyc10g008090.1 Solanum lycopersicum HOM05D003755 ORTHO05D004385 2.5e-84 316.6 277 57.8
Zm00001eb043070 Zea mays HOM05D003755 ORTHO05D004385 3.2e-84 316.2 276 55.8
PGSC0003DMG400010547 Solanum tuberosum HOM05D003755 ORTHO05D004385 5.5e-84 315.5 277 57.8
Nitab4.5_0002196g0020 Nicotiana tabacum HOM05D003755 ORTHO05D004385 1.6e-83 313.9 277 57.8
AL1G22670 Arabidopsis lyrata HOM05D003755 ORTHO05D004385 2.1e-83 313.5 276 57.2
Peaxi162Scf00241g00121 Petunia axillaris HOM05D003755 ORTHO05D004385 3.6e-83 312.8 277 58.1
AT1G11560 Arabidopsis thaliana HOM05D003755 ORTHO05D004385 7.9e-83 311.6 275 56.4
Lalb_Chr06g0164871 Lupinus albus HOM05D003755 ORTHO05D004385 1.0e-82 311.2 277 56.7
TPR.G5472 Trifolium pratense HOM05D003755 ORTHO05D004385 1.8e-82 310.5 257 61.1
CARHR011840 Cardamine hirsuta HOM05D003755 ORTHO05D004385 3.7e-80 302.8 275 55.3
SalBow8G5594 Salvia bowleyana HOM05D003755 ORTHO05D004385 4.8e-80 302.4 273 54.9
Lsat_1_v5_gn_1_121441 Lactuca sativa HOM05D003755 ORTHO05D004385 1.4e-79 300.8 275 54.5
SGA_v2.0_scaffold89G27449 Striga asiatica HOM05D003755 ORTHO05D004385 6.9e-79 298.5 280 54.3
Sabra04G0011400 Salix brachista HOM05D003755 ORTHO05D004385 5.9e-78 295.4 342 49.1
Mapoly0061s0113 Marchantia polymorpha HOM05D003755 ORTHO05D004385 1.7e-77 293.9 278 50.7
SMO118G0372 Selaginella moellendorffii HOM05D003755 ORTHO05D004385 2.2e-77 293.5 280 53.6
PGSC0003DMG400002072 Solanum tuberosum HOM05D003755 ORTHO05D004385 8.5e-77 291.6 306 50.3
Sopen02g024900 Solanum pennellii HOM05D003755 ORTHO05D004385 1.9e-76 290.4 277 53.1
SGA_v2.0_scaffold114G32031 Striga asiatica HOM05D003755 ORTHO05D004385 1.9e-76 290.4 232 59.1
Solyc02g080180.1 Solanum lycopersicum HOM05D003755 ORTHO05D004385 2.5e-76 290.0 277 53.1
Carub.0001s1117 Capsella rubella HOM05D003755 ORTHO05D004385 5.5e-76 288.9 276 52.5
HanXRQChr01g0003661 Helianthus annuus HOM05D003755 ORTHO05D004385 2.1e-75 287.0 277 51.6
CAN.G569.37 Capsicum annuum HOM05D003755 ORTHO05D004385 3.6e-75 286.2 306 50.7
A08p33440 Brassica napus HOM05D003755 ORTHO05D004385 4.4e-73 279.3 275 50.9
BraA08t35260Z Brassica rapa HOM05D003755 ORTHO05D004385 4.4e-73 279.3 275 50.9
Pp3c3_13650 Physcomitrium patens HOM05D003755 ORTHO05D004385 5.7e-73 278.9 308 47.7
Pp3c26_7270 Physcomitrium patens HOM05D003755 ORTHO05D004385 9.7e-73 278.1 308 46.1
Nitab4.5_0002196g0010 Nicotiana tabacum HOM05D000234 ORTHO05D004385 3.7e-72 276.2 244 58.6
BcaB03g13253 Brassica carinata HOM05D003755 ORTHO05D004385 6.3e-72 275.4 276 51.8
AagrBONN_evm.TU.Sc2ySwM_362.2118 Anthoceros agrestis HOM05D003755 ORTHO05D004385 1.1e-71 274.6 278 49.6
C08p14530 Brassica napus HOM05D003755 ORTHO05D004385 4.5e-70 269.2 277 49.5
AagrBONN_evm.TU.Sc2ySwM_362.2344 Anthoceros agrestis HOM05D003755 ORTHO05D004385 5.9e-70 268.9 279 49.8
Pp3c10_1910 Physcomitrium patens HOM05D003755 ORTHO05D004385 5.0e-69 265.8 308 44.2
BcaC07g38668 Brassica carinata HOM05D003755 ORTHO05D004385 1.5e-68 264.2 278 47.8
BolC8t49101H Brassica oleracea HOM05D003755 ORTHO05D004385 1.5e-68 264.2 278 47.8
Sed0022949 Sechium edule HOM05D003755 ORTHO05D004385 3.2e-60 236.5 194 59.3
MBI14_g15203_MAGBIO Magnolia biondii HOM05D003755 ORTHO05D004385 3.6e-59 233.0 216 57.9
Nn1g03617 Nelumbo nucifera HOM05D003755 ORTHO05D004385 8.0e-59 231.9 146 76.0
CAN.G404.10 Capsicum annuum HOM05D003755 ORTHO05D004385 2.3e-58 230.3 154 71.4
AUR62021999 Chenopodium quinoa HOM05D003755 ORTHO05D004385 3.0e-58 229.9 152 71.1
CAN.G782.22 Capsicum annuum HOM05D003755 ORTHO05D004385 4.0e-58 229.6 232 49.1
MBI06_g27714_MAGBIO Magnolia biondii HOM05D003755 ORTHO05D004385 8.8e-58 228.4 152 71.7
Nitab4.5_0010745g0030 Nicotiana tabacum HOM05D003755 ORTHO05D004385 2.0e-57 227.3 157 67.5
MBI19_g26612_MAGBIO Magnolia biondii HOM05D003755 ORTHO05D004385 1.8e-55 220.7 152 70.4
CBR_g36660 Chara braunii HOM05D003755 ORTHO05D004385 4.1e-55 219.5 314 41.7
Nitab4.5_0002347g0110 Nicotiana tabacum HOM05D003755 ORTHO05D004385 2.9e-53 213.4 154 65.6
TPR.G16992 Trifolium pratense HOM05D003755 ORTHO05D004385 1.4e-50 204.5 153 69.3
Nitab4.5_0002645g0040 Nicotiana tabacum HOM05D003755 ORTHO05D004385 8.3e-48 195.3 154 62.3
Lsat_1_v5_gn_3_29240 Lactuca sativa HOM05D003755 ORTHO05D004385 1.1e-47 194.9 260 40.8
CBR_g46234 Chara braunii HOM05D003755 ORTHO05D004385 7.3e-44 182.2 282 38.7
Peaxi162Scf00427g00012 Petunia axillaris HOM05D003755 ORTHO05D004385 2.1e-43 180.6 155 56.8
CAN.G782.11 Capsicum annuum HOM05D003755 ORTHO05D004385 3.3e-36 156.8 161 50.3
Actinidia26947 Actinidia chinensis HOM05D003755 ORTHO05D004385 3.1e-34 150.2 191 49.2
BraA01t03199Z Brassica rapa HOM05D003755 ORTHO05D004385 4.0e-34 149.8 132 56.1
Lsat_1_v5_gn_4_80500 Lactuca sativa HOM05D003755 ORTHO05D004385 5.0e-29 132.9 89 67.4
Cre16.g675602 Chlamydomonas reinhardtii HOM05D003755 ORTHO05D004385 2.0e-25 120.9 277 32.5
Lsat_1_v5_gn_7_27941 Lactuca sativa HOM05D003755 ORTHO05D004385 1.7e-24 117.9 103 57.3
QL10p045362 Quercus lobata HOM05D003755 ORTHO05D004385 1.1e-23 115.2 80 66.2
QL08p007617 Quercus lobata HOM05D003755 ORTHO05D004385 9.2e-23 112.1 81 61.7
MD02G1269200 Malus domestica HOM05D003755 ORTHO05D004385 1.2e-22 111.7 76 68.4
Lsat_1_v5_gn_7_47961 Lactuca sativa HOM05D003755 ORTHO05D004385 7.3e-20 102.4 61 78.7
CAN.G782.12 Capsicum annuum HOM05D003755 ORTHO05D004385 8.1e-19 99.0 69 69.6
Lsat_1_v5_gn_7_47981 Lactuca sativa HOM05D003755 ORTHO05D004385 5.8e-17 92.8 67 64.2
BcaC04g22351 Brassica carinata HOM05D003755 ORTHO05D004385 3.7e-16 90.1 69 68.1
SMO351G0034 Selaginella moellendorffii HOM05D003755 ORTHO05D376906 1.0e-13 82.0 279 26.9
EL10As1g23076 Beta vulgaris HOM05D003755 ORTHO05D004385 1.9e-12 77.8 48 70.8
QL03p066087 Quercus lobata HOM05D003755 ORTHO05D004385 1.8e-10 71.2 53 64.2
AagrBONN_evm.TU.Sc2ySwM_228.3672 Anthoceros agrestis HOM05D003755 ORTHO05D004385 2.1e-06 57.8 75 41.3
MD02G1269300 Malus domestica HOM05D003755 ORTHO05D004385 6.0e-06 56.2 40 72.5


User provided reference genes

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