Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv19981 Davidia involucrata HOM05D007320 ORTHO05D009290 2.1e-170 602.4 348 100.0
Dinv15897 Davidia involucrata HOM05D007320 ORTHO05D009290 9.4e-142 507.3 307 97.4
GSVIVG01020656001 Vitis vinifera HOM05D007320 ORTHO05D009290 9.5e-110 401.0 305 78.0
Actinidia11122 Actinidia chinensis HOM05D007320 ORTHO05D009290 6.8e-108 394.8 305 67.5
Hma1.2p1_0002F.1_g002500 Hydrangea macrophylla HOM05D007320 ORTHO05D009290 1.3e-106 390.6 309 78.6
Atru.chr6.2840 Acer truncatum HOM05D007320 ORTHO05D009290 2.2e-106 389.8 304 67.1
CSS0012636 Camellia sinensis var. sinensis HOM05D007320 ORTHO05D009290 1.4e-105 387.1 305 79.7
vmacro12358 Vaccinium macrocarpon HOM05D007320 ORTHO05D009290 5.4e-105 385.2 306 76.5
Ciclev10017507m.g Citrus clementina HOM05D007320 ORTHO05D009290 7.0e-105 384.8 307 64.2
Rhsim06G0135200 Rhododendron simsii HOM05D007320 ORTHO05D009290 4.6e-104 382.1 306 76.1
Haze_13306 Corylus avellana HOM05D007320 ORTHO05D009290 3.0e-103 379.4 307 74.3
CiPaw.04G130300 Carya illinoinensis HOM05D007320 ORTHO05D009290 1.5e-102 377.1 307 65.1
Cfa014690 Carpinus fangiana HOM05D007320 ORTHO05D009290 3.3e-102 375.9 302 74.2
Prupe.3G125800 Prunus persica HOM05D007320 ORTHO05D009290 7.3e-102 374.8 305 75.7
Lj1P690T28 Lonicera japonica HOM05D007320 ORTHO05D009290 2.8e-101 372.9 306 76.1
TWI59G0750 Tripterygium wilfordii HOM05D007320 ORTHO05D009290 6.8e-100 368.2 302 64.9
Nitab4.5_0008210g0010 Nicotiana tabacum HOM05D007320 ORTHO05D009290 1.3e-95 354.0 297 61.3
FAN10G1335 Fragaria x ananassa HOM05D007320 ORTHO05D009290 3.0e-95 352.8 305 69.2
MD09G1241100 Malus domestica HOM05D007320 ORTHO05D009290 3.9e-95 352.4 305 72.1
Lalb_Chr25g0279081 Lupinus albus HOM05D007320 ORTHO05D009290 5.0e-95 352.1 305 67.9
Nitab4.5_0001895g0020 Nicotiana tabacum HOM05D007320 ORTHO05D009290 5.0e-95 352.1 292 62.0
CANSAT64G2476 Cannabis sativa HOM05D007320 ORTHO05D009290 6.6e-95 351.7 309 69.3
FvH4_7g08410 Fragaria vesca HOM05D007320 ORTHO05D009290 6.6e-95 351.7 305 68.9
Manes.13G139600 Manihot esculenta HOM05D007320 ORTHO05D009290 2.5e-94 349.7 308 66.9
FAN10G4046 Fragaria x ananassa HOM05D007320 ORTHO05D009290 3.3e-94 349.4 305 68.9
FAN03G0990 Fragaria x ananassa HOM05D007320 ORTHO05D009290 4.3e-94 349.0 305 68.9
CAN.G756.7 Capsicum annuum HOM05D007320 ORTHO05D009290 1.2e-93 347.4 297 61.3
TAR627G0001 Trochodendron aralioides HOM05D007320 ORTHO05D009290 1.6e-93 347.1 312 74.0
Lj3g0010689 Lotus japonicus HOM05D007320 ORTHO05D009290 2.8e-93 346.3 305 68.5
Medtr2g090885 Medicago truncatula HOM05D007320 ORTHO05D009290 3.6e-93 345.9 306 69.0
Ca_01474_v3 Cicer arietinum L. HOM05D007320 ORTHO05D009290 6.2e-93 345.1 315 63.8
Oeu000571.1 Olea europaea HOM05D007320 ORTHO05D009290 1.1e-92 344.4 314 63.7
Glyma.12G208100 Glycine max HOM05D007320 ORTHO05D009290 1.4e-92 344.0 299 60.2
Sopen01g035350 Solanum pennellii HOM05D007320 ORTHO05D009290 5.2e-92 342.0 298 59.7
Nn3g20750 Nelumbo nucifera HOM05D007320 ORTHO05D009290 6.8e-92 341.7 317 61.2
Thecc.08G174300 Theobroma cacao HOM05D007320 ORTHO05D009290 1.5e-91 340.5 300 71.3
PGSC0003DMG400001712 Solanum tuberosum HOM05D007320 ORTHO05D009290 3.4e-91 339.3 298 59.1
Solyc01g088490.3 Solanum lycopersicum HOM05D007320 ORTHO05D009290 4.4e-91 339.0 298 59.4
VMungo1080G0443 Vigna mungo HOM05D007320 ORTHO05D009290 9.8e-91 337.8 301 60.5
Cc05_g07980 Coffea canephora HOM05D007320 ORTHO05D009290 3.7e-90 335.9 307 58.6
ClCG02G009070 Citrullus lanatus HOM05D007320 ORTHO05D009290 6.4e-90 335.1 305 56.7
Phvul.005G098950 Phaseolus vulgaris HOM05D007320 ORTHO05D009290 8.3e-90 334.7 299 59.2
Gohir.D05G254900 Gossypium hirsutum HOM05D007320 ORTHO05D009290 2.4e-89 333.2 311 58.8
Gorai.009G266400 Gossypium raimondii HOM05D007320 ORTHO05D009290 2.4e-89 333.2 311 58.5
Hund07849 Selenicereus undatus HOM05D007320 ORTHO05D009290 7.1e-89 331.6 304 55.9
MSTRG.20317 Avicennia marina HOM05D007320 ORTHO05D009290 9.2e-89 331.3 299 57.5
CsaV3_2G004500 Cucumis sativus L. HOM05D007320 ORTHO05D009290 9.2e-89 331.3 305 55.7
RcHm_v2.0_Chr0c20g0500221 Rosa chinensis HOM05D007320 ORTHO05D009290 9.2e-89 331.3 305 63.9
Gohir.A05G253000 Gossypium hirsutum HOM05D007320 ORTHO05D009290 6.0e-88 328.6 311 57.9
COL.COLO4_26851 Corchorus olitorius HOM05D007320 ORTHO05D009290 7.8e-88 328.2 307 64.2
Sed0016711 Sechium edule HOM05D007320 ORTHO05D009290 1.3e-87 327.4 302 65.2
TPR.G6440 Trifolium pratense HOM05D007320 ORTHO05D009290 1.3e-87 327.4 306 69.3
Sabra13G0103100 Salix brachista HOM05D007320 ORTHO05D009290 5.1e-87 325.5 305 68.2
DCAR_013053 Daucus carota HOM05D007320 ORTHO05D009290 4.3e-86 322.4 303 67.3
HanXRQChr17g0565321 Helianthus annuus HOM05D007320 ORTHO05D009290 9.5e-86 321.2 304 56.9
Potri.013G124100 Populus trichocarpa HOM05D007320 ORTHO05D009290 1.2e-85 320.9 305 67.9
Psat5g275040 Pisum sativum HOM05D007320 ORTHO05D009290 2.1e-85 320.1 318 65.1
Cpa.g.sc209.6 Carica papaya HOM05D007320 ORTHO05D009290 4.0e-84 315.8 309 57.0
AUR62035379 Chenopodium quinoa HOM05D007320 ORTHO05D009290 2.6e-83 313.2 296 65.5
Eucgr.F01954 Eucalyptus grandis HOM05D007320 ORTHO05D009290 3.4e-83 312.8 306 65.0
ECA234G2345 Erigeron canadensis HOM05D007320 ORTHO05D009290 7.6e-83 311.6 302 55.6
EL10Ac2g02568 Beta vulgaris HOM05D007320 ORTHO05D009290 2.2e-82 310.1 304 64.1
SalBow8G4737 Salvia bowleyana HOM05D007320 ORTHO05D009290 2.2e-82 310.1 301 55.1
THA.LOC104800856 Tarenaya hassleriana HOM05D007320 ORTHO05D009290 2.9e-82 309.7 301 66.8
Migut.L01118 Erythranthe guttata HOM05D007320 ORTHO05D009290 3.7e-82 309.3 305 56.4
Aa31LG1G7290 Aethionema arabicum HOM05D007320 ORTHO05D009290 8.4e-82 308.1 298 62.8
Lsat_1_v5_gn_4_28301 Lactuca sativa HOM05D007320 ORTHO05D009290 1.9e-81 307.0 294 55.8
AT1G06270 Arabidopsis thaliana HOM05D007320 ORTHO05D009290 7.1e-81 305.1 299 65.6
Sp1g05080 Schrenkiella parvula HOM05D007320 ORTHO05D009290 9.2e-81 304.7 299 65.9
Thhalv10008110m.g Eutrema salsugineum HOM05D007320 ORTHO05D009290 1.6e-80 303.9 299 65.2
SalBow8G5340 Salvia bowleyana HOM05D007320 ORTHO05D009290 1.6e-80 303.9 301 53.8
Sc07g0005270 Simmondsia chinensis HOM05D007320 ORTHO05D009290 1.6e-80 303.9 312 65.4
CARHR005830 Cardamine hirsuta HOM05D007320 ORTHO05D009290 6.0e-80 302.0 299 64.9
AL1G16280 Arabidopsis lyrata HOM05D007320 ORTHO05D009290 1.7e-79 300.4 299 65.2
Migut.C00284 Erythranthe guttata HOM05D007320 ORTHO05D009290 3.9e-79 299.3 297 56.6
BcaB02g06809 Brassica carinata HOM05D007320 ORTHO05D009290 5.1e-79 298.9 298 64.8
Carub.0001s0564 Capsella rubella HOM05D007320 ORTHO05D009290 5.1e-79 298.9 298 65.1
SGA_v2.0_scaffold313G48283 Striga asiatica HOM05D007320 ORTHO05D009290 1.1e-78 297.7 312 52.6
MBI06_g25716_MAGBIO Magnolia biondii HOM05D007320 ORTHO05D009290 2.1e-77 293.5 314 55.4
C05p04580 Brassica napus HOM05D007320 ORTHO05D009290 1.8e-76 290.4 299 63.5
Migut.D01592 Erythranthe guttata HOM05D007320 ORTHO05D009290 1.8e-76 290.4 305 54.8
BolC5t29229H Brassica oleracea HOM05D007320 ORTHO05D009290 2.4e-76 290.0 299 63.5
BcaC05g24288 Brassica carinata HOM05D007320 ORTHO05D009290 6.8e-76 288.5 299 63.2
A10p04990 Brassica napus HOM05D007320 ORTHO05D009290 1.5e-75 287.3 299 63.2
BraA10t42760Z Brassica rapa HOM05D007320 ORTHO05D009290 1.5e-75 287.3 299 63.2
Peaxi162Scf00745g00038 Petunia axillaris HOM05D007320 ORTHO05D009290 2.8e-69 266.5 297 49.5
unitig_62.g23164 Utricularia gibba HOM05D007320 ORTHO05D009290 1.1e-68 264.6 304 48.0
PGR083G2305 Punica granatum HOM05D007320 ORTHO05D009290 7.6e-67 258.5 298 60.4
SHI10502 Sapria himalayana HOM05D007320 ORTHO05D009290 8.4e-66 255.0 296 57.1
TPR.G5736 Trifolium pratense HOM05D007320 ORTHO05D009290 2.8e-61 240.0 294 47.3
AUR62024073 Chenopodium quinoa HOM05D007320 ORTHO05D009290 1.2e-59 234.6 212 71.2
TPR.G34643 Trifolium pratense HOM05D007320 ORTHO05D009290 4.2e-57 226.1 173 66.5
MELO3C004341.2 Cucumis melo HOM05D007320 ORTHO05D009290 8.1e-53 211.8 223 50.2
Phvul.005G098533 Phaseolus vulgaris HOM05D007320 ORTHO05D009290 2.9e-50 203.4 159 64.2
Cpa.g.sc209.4 Carica papaya HOM05D007320 ORTHO05D009290 3.3e-38 163.3 161 55.9
arahy.Tifrunner.gnm1.ann1.66V1NK Arachis hypogaea HOM05D007320 ORTHO05D009290 6.7e-31 139.0 155 51.0
arahy.Tifrunner.gnm1.ann1.CSM94Q Arachis hypogaea HOM05D007320 ORTHO05D009290 1.5e-30 137.9 142 52.8
Dinv15900 Davidia involucrata HOM05D007320 ORTHO05D009290 3.1e-28 130.2 164 69.5
Sc21g0003330 Simmondsia chinensis HOM05D007320 ORTHO05D009290 3.1e-28 130.2 180 45.6
PGSC0003DMG401001710 Solanum tuberosum HOM05D007320 ORTHO05D009290 2.5e-25 120.6 94 63.8
Sc21g0003340 Simmondsia chinensis HOM05D007320 ORTHO05D009290 2.1e-24 117.5 76 73.7
arahy.Tifrunner.gnm1.ann1.5PR57S Arachis hypogaea HOM05D007320 ORTHO05D009290 1.1e-20 105.1 109 56.9
SalBow7G0970 Salvia bowleyana HOM05D000555 ORTHO05D000646 3.8e-18 96.7 96 54.2
Peaxi162Scf00102g01049 Petunia axillaris HOM05D007320 ORTHO05D009290 2.0e-14 84.3 77 55.8
MELO3C021360.2 Cucumis melo HOM05D007320 ORTHO05D009290 2.0e-06 57.8 95 38.9


User provided reference genes

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