Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv19962 Davidia involucrata HOM05D007096 ORTHO05D008288 7.0e-34 146.7 76 100.0
PGSC0003DMG400023201 Solanum tuberosum HOM05D007096 ORTHO05D008288 6.0e-17 90.5 71 67.6
Cc00_g23090 Coffea canephora HOM05D007096 ORTHO05D008288 1.3e-16 89.4 77 64.9
arahy.Tifrunner.gnm1.ann1.2U9IP4 Arachis hypogaea HOM05D007096 ORTHO05D008288 5.1e-16 87.4 65 69.2
Thecc.03G087500 Theobroma cacao HOM05D007096 ORTHO05D008288 5.1e-16 87.4 71 66.2
QL10p017020 Quercus lobata HOM05D007096 ORTHO05D008288 4.3e-15 84.3 71 63.4
DCAR_016556 Daucus carota HOM05D007096 ORTHO05D008288 5.6e-15 84.0 62 69.4
Prupe.5G193600 Prunus persica HOM05D007096 ORTHO05D008288 7.3e-15 83.6 71 62.0
COL.COLO4_09292 Corchorus olitorius HOM05D007096 ORTHO05D008288 9.5e-15 83.2 72 65.3
Oeu047297.1 Olea europaea HOM05D007096 ORTHO05D008288 1.6e-14 82.4 71 64.8
RcHm_v2.0_Chr7g0181441 Rosa chinensis HOM05D007096 ORTHO05D008288 3.6e-14 81.3 71 62.0
Glyma.06G194000 Glycine max HOM05D007096 ORTHO05D008288 4.7e-14 80.9 71 64.8
CSS0038065 Camellia sinensis var. sinensis HOM05D007096 ORTHO05D008288 8.1e-14 80.1 71 64.8
Glyma.04G169400 Glycine max HOM05D007096 ORTHO05D008288 8.1e-14 80.1 70 62.9
Glyma.17G100200 Glycine max HOM05D007096 ORTHO05D008288 8.1e-14 80.1 78 60.3
Ciclev10023845m.g Citrus clementina HOM05D007096 ORTHO05D008288 1.1e-13 79.7 69 59.4
Lj1g0007220 Lotus japonicus HOM05D007096 ORTHO05D008288 1.1e-13 79.7 70 62.9
CiPaw.11G044600 Carya illinoinensis HOM05D007096 ORTHO05D008288 1.4e-13 79.3 69 60.9
Phvul.009G187200 Phaseolus vulgaris HOM05D007096 ORTHO05D008288 3.1e-13 78.2 71 60.6
CiPaw.12G013300 Carya illinoinensis HOM05D007096 ORTHO05D008288 6.8e-13 77.0 71 57.7
Manes.06G092300 Manihot esculenta HOM05D007096 ORTHO05D008288 8.9e-13 76.6 84 52.4
TAR629G1384 Trochodendron aralioides HOM05D000618 ORTHO05D000454 1.2e-12 76.3 71 63.4
Manes.14G078100 Manihot esculenta HOM05D007096 ORTHO05D008288 2.0e-12 75.5 71 56.3
FAN13G0716 Fragaria x ananassa HOM05D007096 ORTHO05D008288 9.9e-12 73.2 71 59.2
Lj4g0000471 Lotus japonicus HOM05D007096 ORTHO05D008288 9.9e-12 73.2 69 58.0
FAN08G2460 Fragaria x ananassa HOM05D007096 ORTHO05D008288 1.3e-11 72.8 71 59.2
Glyma.05G026700 Glycine max HOM05D007096 ORTHO05D008288 1.3e-11 72.8 51 66.7
Gohir.D12G179900 Gossypium hirsutum HOM05D007096 ORTHO05D008288 1.7e-11 72.4 72 54.2
Gorai.008G193000 Gossypium raimondii HOM05D007096 ORTHO05D008288 1.7e-11 72.4 72 54.2
Lsat_1_v5_gn_5_19601 Lactuca sativa HOM05D007096 ORTHO05D008288 1.7e-11 72.4 69 59.4
Phvul.003G190100 Phaseolus vulgaris HOM05D007096 ORTHO05D008288 2.9e-11 71.6 79 57.0
Gohir.A12G177500 Gossypium hirsutum HOM05D007096 ORTHO05D008288 6.4e-11 70.5 72 52.8
Lalb_Chr13g0303241 Lupinus albus HOM05D007096 ORTHO05D008288 8.4e-11 70.1 79 51.9
TAR622G0633 Trochodendron aralioides HOM05D000618 ORTHO05D000454 8.4e-11 70.1 74 58.1
Lalb_Chr12g0196861 Lupinus albus HOM05D007096 ORTHO05D008288 1.1e-10 69.7 78 56.4
TAR371G0768 Trochodendron aralioides HOM05D007096 ORTHO05D008288 1.4e-10 69.3 71 53.5
RcHm_v2.0_Chr4g0439851 Rosa chinensis HOM05D007096 ORTHO05D008288 3.2e-10 68.2 65 60.0
Atru.chr9.225 Acer truncatum HOM05D007096 ORTHO05D008288 4.1e-10 67.8 66 57.6
Thecc.02G346100 Theobroma cacao HOM05D007096 ORTHO05D008288 4.1e-10 67.8 75 54.7
Nn4g23168 Nelumbo nucifera HOM05D007096 ORTHO05D008288 9.2e-10 66.6 72 56.9
COL.COLO4_23015 Corchorus olitorius HOM05D007096 ORTHO05D008288 1.2e-09 66.2 65 60.0
TAR374G0516 Trochodendron aralioides HOM05D007096 ORTHO05D008288 1.2e-09 66.2 74 54.1
Nn3g17242 Nelumbo nucifera HOM05D007096 ORTHO05D008288 2.1e-09 65.5 72 55.6
Duzib268G0913 Durio zibethinus HOM05D007096 ORTHO05D008288 2.7e-09 65.1 75 50.7
Gohir.D12G168200 Gossypium hirsutum HOM05D007096 ORTHO05D008288 2.7e-09 65.1 62 62.9
Gorai.008G181100 Gossypium raimondii HOM05D007096 ORTHO05D008288 2.7e-09 65.1 62 62.9
CiPaw.05G135100 Carya illinoinensis HOM05D007096 ORTHO05D008288 6.0e-09 63.9 75 53.3
ClCG04G012240 Citrullus lanatus HOM05D007096 ORTHO05D008288 6.0e-09 63.9 72 54.2
Gohir.A12G165100 Gossypium hirsutum HOM05D007096 ORTHO05D008288 1.0e-08 63.2 62 61.3
Nitab4.5_0000145g0050 Nicotiana tabacum HOM05D007096 ORTHO05D008288 1.0e-08 63.2 76 51.3
CsaV3_2G010680 Cucumis sativus L. HOM05D007096 ORTHO05D008288 1.3e-08 62.8 65 58.5
Prupe.1G274800 Prunus persica HOM05D007096 ORTHO05D008288 1.3e-08 62.8 73 52.1
Medtr3g037730 Medicago truncatula HOM05D007096 ORTHO05D008288 1.7e-08 62.4 59 54.2
Ciclev10033178m.g Citrus clementina HOM05D007096 ORTHO05D008288 3.0e-08 61.6 77 53.2
SalBow7G4253 Salvia bowleyana HOM05D007096 ORTHO05D008288 3.0e-08 61.6 67 55.2
CiPaw.06G085100 Carya illinoinensis HOM05D007096 ORTHO05D008288 5.1e-08 60.8 74 52.7
Sed0011431 Sechium edule HOM05D007096 ORTHO05D008288 6.6e-08 60.5 71 52.1
ClCG11G009950 Citrullus lanatus HOM05D007096 ORTHO05D008288 1.1e-07 59.7 59 61.0
Haze_12011 Corylus avellana HOM05D007096 ORTHO05D008288 1.1e-07 59.7 74 50.0
Cfa008979 Carpinus fangiana HOM05D007096 ORTHO05D008288 1.5e-07 59.3 74 50.0
Migut.D01817 Erythranthe guttata HOM05D007096 ORTHO05D008288 1.9e-07 58.9 50 60.0
Sed0002990 Sechium edule HOM05D007096 ORTHO05D008288 2.5e-07 58.5 64 54.7
Gohir.A05G183700 Gossypium hirsutum HOM05D007096 ORTHO05D008288 3.3e-07 58.2 75 45.3
CsaV3_1G005510 Cucumis sativus L. HOM05D007096 ORTHO05D008288 5.6e-07 57.4 72 50.0
Gohir.D05G304900 Gossypium hirsutum HOM05D007096 ORTHO05D008288 7.3e-07 57.0 71 49.3
Gorai.009G324600 Gossypium raimondii HOM05D007096 ORTHO05D008288 7.3e-07 57.0 71 46.5
Migut.I00178 Erythranthe guttata HOM05D007096 ORTHO05D008288 9.6e-07 56.6 61 54.1
Ah.02g129680 Amaranthus hybridus HOM05D007096 ORTHO05D008288 1.2e-06 56.2 73 47.9
CSS0030953 Camellia sinensis var. sinensis HOM05D007096 ORTHO05D008288 1.2e-06 56.2 72 51.4
Migut.L01293 Erythranthe guttata HOM05D007096 ORTHO05D008288 1.2e-06 56.2 63 55.6
Lsat_1_v5_gn_4_108521 Lactuca sativa HOM05D007096 ORTHO05D008288 1.2e-06 56.2 61 55.7
MELO3C001984.2 Cucumis melo HOM05D007096 ORTHO05D008288 2.8e-06 55.1 72 47.2
MELO3C017172.2 Cucumis melo HOM05D007096 ORTHO05D008288 2.8e-06 55.1 65 47.7
FAN04G0033 Fragaria x ananassa HOM05D007096 ORTHO05D008288 2.8e-06 55.1 67 50.7
Sed0016779 Sechium edule HOM05D007096 ORTHO05D008288 4.7e-06 54.3 65 50.8
Gohir.A03G101000 Gossypium hirsutum HOM05D007096 ORTHO05D008288 8.1e-06 53.5 63 49.2
Manes.05G101400 Manihot esculenta HOM05D007096 ORTHO05D008288 8.1e-06 53.5 72 50.0


User provided reference genes

Program Settings