Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv19957 Davidia involucrata HOM05D006971 ORTHO05D009076 5.6e-65 250.8 123 100.0
Dinv38707 Davidia involucrata HOM05D006971 ORTHO05D009076 4.0e-47 191.4 125 79.2
CSS0007636 Camellia sinensis var. sinensis HOM05D006971 ORTHO05D009076 9.9e-46 186.8 125 77.6
CSS0034788 Camellia sinensis var. sinensis HOM05D006971 ORTHO05D009076 9.9e-46 186.8 125 77.6
Rhsim08G0155400 Rhododendron simsii HOM05D006971 ORTHO05D009076 1.9e-44 182.6 125 77.6
Eucgr.B00501 Eucalyptus grandis HOM05D006971 ORTHO05D009076 7.1e-44 180.6 125 74.4
Ciclev10020174m.g Citrus clementina HOM05D006971 ORTHO05D009076 1.2e-43 179.9 125 76.0
GSVIVG01008006001 Vitis vinifera HOM05D006971 ORTHO05D009076 1.6e-43 179.5 125 73.6
Actinidia04895 Actinidia chinensis HOM05D006971 ORTHO05D009076 4.6e-43 177.9 125 74.4
CANSAT80G1552 Cannabis sativa HOM05D006971 ORTHO05D009076 4.6e-43 177.9 125 72.8
Lj9A463T31 Lonicera japonica HOM05D006971 ORTHO05D009076 6.0e-43 177.6 125 75.2
Nitab4.5_0004704g0010 Nicotiana tabacum HOM05D006971 ORTHO05D009076 1.3e-42 176.4 125 74.4
CARHR067910 Cardamine hirsuta HOM05D006971 ORTHO05D009076 1.8e-42 176.0 125 71.2
CiPaw.11G044200 Carya illinoinensis HOM05D006971 ORTHO05D009076 3.0e-42 175.3 125 72.8
Nitab4.5_0000842g0110 Nicotiana tabacum HOM05D006971 ORTHO05D009076 3.9e-42 174.9 125 73.6
Solyc03g116110.3 Solanum lycopersicum HOM05D006971 ORTHO05D009076 5.1e-42 174.5 125 73.6
Sopen03g035080 Solanum pennellii HOM05D006971 ORTHO05D009076 5.1e-42 174.5 125 73.6
PGSC0003DMG400019536 Solanum tuberosum HOM05D006971 ORTHO05D009076 6.7e-42 174.1 125 73.6
Cpa.g.sc111.5 Carica papaya HOM05D006971 ORTHO05D009076 8.7e-42 173.7 125 70.4
Nn4g23158 Nelumbo nucifera HOM05D006971 ORTHO05D009076 8.7e-42 173.7 125 71.2
CAN.G837.13 Capsicum annuum HOM05D006971 ORTHO05D009076 1.1e-41 173.3 125 73.6
QL10p016808 Quercus lobata HOM05D006971 ORTHO05D009076 1.1e-41 173.3 125 72.0
VMungo1215G2247 Vigna mungo HOM05D006971 ORTHO05D009076 1.1e-41 173.3 125 71.2
Ca_21824_v3 Cicer arietinum L. HOM05D006971 ORTHO05D009076 1.5e-41 172.9 125 70.4
Manes.06G092900 Manihot esculenta HOM05D006971 ORTHO05D009076 1.5e-41 172.9 125 69.6
TAR629G1638 Trochodendron aralioides HOM05D006971 ORTHO05D009076 2.5e-41 172.2 125 70.4
DCAR_016549 Daucus carota HOM05D006971 ORTHO05D009076 5.6e-41 171.0 125 73.6
Phvul.003G190500 Phaseolus vulgaris HOM05D006971 ORTHO05D009076 5.6e-41 171.0 125 70.4
TWI15G1038 Tripterygium wilfordii HOM05D006971 ORTHO05D009076 7.4e-41 170.6 125 72.0
Glyma.05G027100 Glycine max HOM05D006971 ORTHO05D009076 9.6e-41 170.2 125 70.4
Glyma.17G099600 Glycine max HOM05D006971 ORTHO05D009076 1.6e-40 169.5 125 69.6
Lalb_Chr07g0178011 Lupinus albus HOM05D006971 ORTHO05D009076 1.6e-40 169.5 125 69.6
arahy.Tifrunner.gnm1.ann1.QE88UD Arachis hypogaea HOM05D006971 ORTHO05D009076 2.1e-40 169.1 132 66.7
HanXRQChr05g0158151 Helianthus annuus HOM05D006971 ORTHO05D009076 2.1e-40 169.1 125 72.0
Oeu006511.1 Olea europaea HOM05D006971 ORTHO05D009076 2.1e-40 169.1 125 70.4
Psat4g051280 Pisum sativum HOM05D006971 ORTHO05D009076 2.1e-40 169.1 125 69.6
PGR083G0834 Punica granatum HOM05D006971 ORTHO05D009076 2.1e-40 169.1 125 70.4
arahy.Tifrunner.gnm1.ann1.NVD91E Arachis hypogaea HOM05D006971 ORTHO05D009076 2.8e-40 168.7 132 65.9
Cc04_g16660 Coffea canephora HOM05D006971 ORTHO05D009076 2.8e-40 168.7 125 72.0
RcHm_v2.0_Chr7g0181351 Rosa chinensis HOM05D006971 ORTHO05D009076 2.8e-40 168.7 125 69.6
BcaC03g15516 Brassica carinata HOM05D006971 ORTHO05D009076 3.7e-40 168.3 125 67.2
C02p31990 Brassica napus HOM05D006971 ORTHO05D009076 3.7e-40 168.3 125 67.2
COL.COLO4_28316 Corchorus olitorius HOM05D006971 ORTHO05D009076 4.8e-40 167.9 125 70.4
Carub.0002s2143 Capsella rubella HOM05D006971 ORTHO05D009076 6.2e-40 167.5 125 68.8
Lj4g0026607 Lotus japonicus HOM05D006971 ORTHO05D009076 6.2e-40 167.5 125 69.6
AL2G34520 Arabidopsis lyrata HOM05D006971 ORTHO05D009076 8.1e-40 167.2 125 68.8
TPR.G9261 Trifolium pratense HOM05D006971 ORTHO05D009076 8.1e-40 167.2 125 69.6
MD14G1199800 Malus domestica HOM05D006971 ORTHO05D009076 1.1e-39 166.8 125 67.2
Prupe.5G193100 Prunus persica HOM05D006971 ORTHO05D009076 1.1e-39 166.8 125 67.2
BcaB05g24862 Brassica carinata HOM05D006971 ORTHO05D009076 1.4e-39 166.4 125 67.2
Sabra17G0095300 Salix brachista HOM05D006971 ORTHO05D009076 1.4e-39 166.4 125 67.2
Thecc.03G086400 Theobroma cacao HOM05D006971 ORTHO05D009076 1.4e-39 166.4 125 69.6
Duzib205G0087 Durio zibethinus HOM05D006971 ORTHO05D009076 1.8e-39 166.0 125 68.0
ECA246G1831 Erigeron canadensis HOM05D006971 ORTHO05D009076 1.8e-39 166.0 125 69.6
AT1G74640 Arabidopsis thaliana HOM05D006971 ORTHO05D009076 2.4e-39 165.6 125 68.8
A02p19460 Brassica napus HOM05D006971 ORTHO05D009076 2.4e-39 165.6 125 66.4
Cfa018946 Carpinus fangiana HOM05D006971 ORTHO05D009076 2.4e-39 165.6 125 68.8
CsaV3_1G005470 Cucumis sativus L. HOM05D006971 ORTHO05D009076 2.4e-39 165.6 125 65.6
FvH4_5g14981 Fragaria vesca HOM05D006971 ORTHO05D009076 2.4e-39 165.6 125 69.6
FAN08G1158 Fragaria x ananassa HOM05D006971 ORTHO05D009076 2.4e-39 165.6 125 68.8
FAN13G3185 Fragaria x ananassa HOM05D006971 ORTHO05D009076 2.4e-39 165.6 125 69.6
FAN18G2929 Fragaria x ananassa HOM05D006971 ORTHO05D009076 2.4e-39 165.6 125 69.6
Aa31LG4G4870 Aethionema arabicum HOM05D006971 ORTHO05D009076 3.1e-39 165.2 125 68.0
BraA02t06985Z Brassica rapa HOM05D006971 ORTHO05D009076 3.1e-39 165.2 125 66.4
FAN04G0596 Fragaria x ananassa HOM05D006971 ORTHO05D009076 3.1e-39 165.2 125 69.6
Lsat_1_v5_gn_5_20140 Lactuca sativa HOM05D006971 ORTHO05D009076 3.1e-39 165.2 125 69.6
Medtr0493s0030 Medicago truncatula HOM05D006971 ORTHO05D009076 3.1e-39 165.2 125 68.8
Potri.017G115100 Populus trichocarpa HOM05D006971 ORTHO05D009076 3.1e-39 165.2 125 68.0
Sp5g29760 Schrenkiella parvula HOM05D006971 ORTHO05D009076 4.0e-39 164.9 125 67.2
MELO3C001980.2 Cucumis melo HOM05D006971 ORTHO05D009076 5.3e-39 164.5 125 64.8
PSO017G5818 Papaver somniferum HOM05D006971 ORTHO05D009076 5.3e-39 164.5 126 69.0
MSTRG.4425 Avicennia marina HOM05D006971 ORTHO05D009076 6.9e-39 164.1 125 67.2
PSO478G0283 Papaver somniferum HOM05D006971 ORTHO05D009076 6.9e-39 164.1 126 69.0
Aqoxy3G04167 Aquilegia oxysepala HOM05D006971 ORTHO05D009076 1.2e-38 163.3 125 67.2
THA.LOC104808268 Tarenaya hassleriana HOM05D006971 ORTHO05D009076 1.5e-38 162.9 125 67.2
SalBow7G4263 Salvia bowleyana HOM05D006971 ORTHO05D009076 7.6e-38 160.6 125 64.0
Migut.D01821 Erythranthe guttata HOM05D006971 ORTHO05D009076 9.9e-38 160.2 125 65.6
CDE07G1445 Ceratophyllum demersum HOM05D006971 ORTHO05D009076 2.2e-37 159.1 125 65.6
MBI02_g41659_MAGBIO Magnolia biondii HOM05D006971 ORTHO05D009076 2.9e-37 158.7 124 65.3
Sed0024719 Sechium edule HOM05D006971 ORTHO05D009076 2.9e-37 158.7 125 63.2
Peaxi162Scf00274g00071 Petunia axillaris HOM05D006971 ORTHO05D009076 4.9e-37 157.9 125 68.8
Ah.02g113480 Amaranthus hybridus HOM05D006971 ORTHO05D009076 6.4e-37 157.5 125 68.0
SGA_v2.0_scaffold114G31906 Striga asiatica HOM05D006971 ORTHO05D009076 1.4e-36 156.4 125 64.0
Gohir.A08G094100 Gossypium hirsutum HOM05D006971 ORTHO05D009076 4.2e-36 154.8 134 64.9
Zm00001eb099580 Zea mays HOM05D006971 ORTHO05D009076 2.7e-35 152.1 125 64.0
Gorai.004G112200 Gossypium raimondii HOM05D006971 ORTHO05D009076 3.5e-35 151.8 151 56.3
Os09g0413700 Oryza sativa ssp. japonica HOM05D006971 ORTHO05D009076 6.0e-35 151.0 125 63.2
AUR62008412 Chenopodium quinoa HOM05D006971 ORTHO05D009076 2.3e-34 149.1 125 64.0
HPP92_027581 Vanilla planifolia HOM05D006971 ORTHO05D009076 2.3e-34 149.1 125 63.2
unitig_60.g25418 Utricularia gibba HOM05D006971 ORTHO05D009076 1.9e-33 146.0 127 61.4
ATR0564G273 Amborella trichopoda HOM05D006971 ORTHO05D009076 9.0e-31 137.1 125 56.8
vmacro17545 Vaccinium macrocarpon HOM05D006971 ORTHO05D009076 3.9e-26 121.7 76 78.9
Pp3c23_920 Physcomitrium patens HOM05D006971 ORTHO05D009076 3.7e-24 115.2 125 47.2
ClCG04G012280 Citrullus lanatus HOM05D006971 ORTHO05D009076 8.2e-24 114.0 78 67.9
AUR62021684 Chenopodium quinoa HOM05D006971 ORTHO05D009076 1.8e-23 112.8 125 53.6
AagrBONN_evm.TU.Sc2ySwM_368.527 Anthoceros agrestis HOM05D006971 ORTHO05D009076 2.4e-23 112.5 124 46.0
SMO111G0229 Selaginella moellendorffii HOM05D006971 ORTHO05D009076 3.1e-23 112.1 125 47.2
HPP92_002356 Vanilla planifolia HOM05D006971 ORTHO05D009076 5.3e-23 111.3 122 50.8
Mapoly0071s0120 Marchantia polymorpha HOM05D006971 ORTHO05D009076 5.9e-22 107.8 125 47.2
Mapoly0229s0006 Marchantia polymorpha HOM05D006971 ORTHO05D009076 5.9e-22 107.8 125 47.2
EL10Ac5g11009 Beta vulgaris HOM05D006971 ORTHO05D009076 4.2e-20 101.7 86 60.5
HPP92_002355 Vanilla planifolia HOM05D006971 ORTHO05D009076 4.2e-20 101.7 121 46.3
Thhalv10019619m.g Eutrema salsugineum HOM05D006971 ORTHO05D009076 4.6e-19 98.2 67 73.1
Gohir.D08G105301 Gossypium hirsutum HOM05D006971 ORTHO05D009076 1.0e-18 97.1 75 68.0
Hund02652 Selenicereus undatus HOM05D006971 ORTHO05D009076 1.4e-18 96.7 76 63.2
BcaB03g13848 Brassica carinata HOM05D006971 ORTHO05D009076 1.3e-16 90.1 59 71.2
SEGI_28088 Sequoiadendron giganteum HOM05D006971 ORTHO05D009076 1.7e-13 79.7 71 50.7
vmacro17544 Vaccinium macrocarpon HOM05D006971 ORTHO05D009076 7.9e-11 70.9 46 76.1


User provided reference genes

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