Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv19741 Davidia involucrata HOM05D000010 ORTHO05D000063 5.0e-260 900.6 460 100.0
Dinv29201 Davidia involucrata HOM05D002523 ORTHO05D002951 3.4e-232 808.1 445 93.9
Dinv17289 Davidia involucrata HOM05D000617 ORTHO05D000478 2.9e-138 496.1 494 61.9
Hma1.2p1_0115F.1_g055590 Hydrangea macrophylla HOM05D000010 ORTHO05D000063 5.8e-91 339.0 585 42.2
Hma1.2p1_0415F.1_g148280 Hydrangea macrophylla HOM05D000010 ORTHO05D000063 7.7e-67 258.8 481 42.2
Actinidia34278 Actinidia chinensis HOM05D000617 ORTHO05D000478 3.2e-65 253.4 406 44.6
Lj1A1029G62 Lonicera japonica HOM05D000010 ORTHO05D000063 4.1e-60 236.5 493 38.3
vmacro06457 Vaccinium macrocarpon HOM05D000010 ORTHO05D000063 3.8e-58 229.9 452 41.4
TAR463G0002 Trochodendron aralioides HOM05D000010 ORTHO05D000063 2.0e-51 207.6 508 36.6
Rhsim09G0210500 Rhododendron simsii HOM05D000010 ORTHO05D000063 2.2e-50 204.1 475 35.6
CSS0019384 Camellia sinensis var. sinensis HOM05D000010 ORTHO05D000063 3.8e-50 203.4 472 39.0
Lj3A893T76 Lonicera japonica HOM05D000010 ORTHO05D000063 6.8e-47 192.6 389 39.8
Nitab4.5_0004654g0040 Nicotiana tabacum HOM05D000010 ORTHO05D000063 5.7e-46 189.5 486 36.0
Cc02_g00700 Coffea canephora HOM05D000010 ORTHO05D000063 2.2e-45 187.6 488 32.6
vmacro10167 Vaccinium macrocarpon HOM05D000010 ORTHO05D000063 2.8e-45 187.2 448 34.8
Nitab4.5_0000021g0030 Nicotiana tabacum HOM05D000010 ORTHO05D000063 3.7e-45 186.8 485 36.7
Nitab4.5_0000115g0100 Nicotiana tabacum HOM05D000617 ORTHO05D000063 4.8e-45 186.4 413 38.3
Nitab4.5_0013228g0020 Nicotiana tabacum HOM05D000010 ORTHO05D000063 1.4e-44 184.9 487 36.1
PGSC0003DMG400000555 Solanum tuberosum HOM05D000010 ORTHO05D000063 1.3e-42 178.3 487 35.9
GSVIVG01038666001 Vitis vinifera HOM05D000010 ORTHO05D000063 1.7e-42 177.9 467 36.2
Migut.F00136 Erythranthe guttata HOM05D000010 ORTHO05D000063 2.3e-42 177.6 465 36.1
SalBow4G1625 Salvia bowleyana HOM05D000010 ORTHO05D000063 3.8e-42 176.8 465 35.9
CAN.G303.43 Capsicum annuum HOM05D000010 ORTHO05D000063 1.6e-40 171.4 483 35.4
Rhsim03G0217000 Rhododendron simsii HOM05D000617 ORTHO05D000478 6.1e-40 169.5 438 36.3
Sopen03g021820 Solanum pennellii HOM05D000010 ORTHO05D000063 5.2e-39 166.4 492 34.8
Peaxi162Scf00815g00121 Petunia axillaris HOM05D000010 ORTHO05D000063 6.8e-39 166.0 491 34.8
Oeu017368.2 Olea europaea HOM05D000010 ORTHO05D000063 8.9e-39 165.6 474 32.7
CSS0043218 Camellia sinensis var. sinensis HOM05D000010 ORTHO05D000063 3.7e-37 160.2 368 38.0
CAN.G65.148 Capsicum annuum HOM05D000010 ORTHO05D000063 3.1e-36 157.1 492 32.7
Cpa.g.sc3.170 Carica papaya HOM05D000010 ORTHO05D000063 1.6e-35 154.8 493 32.0
DCAR_020385 Daucus carota HOM05D000010 ORTHO05D000063 2.3e-34 151.0 399 35.3
Solyc03g080090.4 Solanum lycopersicum HOM05D000010 ORTHO05D000063 5.0e-34 149.8 470 33.8
Oeu061039.3 Olea europaea HOM05D000010 ORTHO05D000063 1.9e-33 147.9 473 31.3
PGSC0003DMG402027023 Solanum tuberosum HOM05D000010 ORTHO05D000063 4.3e-33 146.7 480 32.5
SGA_v2.0_scaffold18G08480 Striga asiatica HOM05D000010 ORTHO05D000063 4.3e-33 146.7 352 36.6
MSTRG.26965 Avicennia marina HOM05D000010 ORTHO05D000063 9.5e-33 145.6 427 34.9
CiPaw.06G039200 Carya illinoinensis HOM05D000010 ORTHO05D000063 3.6e-32 143.7 380 37.9
TAR374G0753 Trochodendron aralioides HOM05D000010 ORTHO05D000063 1.0e-31 142.1 424 35.4
TAR375G0701 Trochodendron aralioides HOM05D000010 ORTHO05D000063 1.8e-31 141.4 474 32.1
Cfa016143 Carpinus fangiana HOM05D000010 ORTHO05D000063 4.4e-30 136.7 479 30.9
Peaxi162Scf01447g00005 Petunia axillaris HOM05D000010 ORTHO05D000063 1.7e-29 134.8 193 46.6
Dinv18787 Davidia involucrata HOM05D000010 ORTHO05D000063 2.4e-28 131.0 503 31.2
Manes.01G044700 Manihot esculenta HOM05D000010 ORTHO05D000063 3.5e-27 127.1 404 32.7
Sopen06g029400 Solanum pennellii HOM05D000010 ORTHO05D000063 4.6e-27 126.7 457 30.4
MSTRG.8599 Avicennia marina HOM05D000010 ORTHO05D000063 5.6e-25 119.8 418 33.5
Solyc06g073050.2 Solanum lycopersicum HOM05D000010 ORTHO05D000063 1.6e-24 118.2 458 29.3
Dinv08686 Davidia involucrata HOM05D000010 ORTHO05D000063 1.4e-23 115.2 480 30.0
Lsat_1_v5_gn_0_9760 Lactuca sativa HOM05D000010 ORTHO05D000063 2.3e-23 114.4 356 32.9
ECA232G0196 Erigeron canadensis HOM05D000010 ORTHO05D000063 3.1e-23 114.0 354 33.3
Prupe.5G135400 Prunus persica HOM05D000010 ORTHO05D000063 3.1e-23 114.0 422 31.5
GSVIVG01019702001 Vitis vinifera HOM05D000010 ORTHO05D000063 8.9e-23 112.5 409 29.3
Thecc.03G210700 Theobroma cacao HOM05D000010 ORTHO05D000063 1.2e-22 112.1 415 31.6
Actinidia18686 Actinidia chinensis HOM05D000010 ORTHO05D000063 2.0e-22 111.3 261 33.3
Duzib084G1090 Durio zibethinus HOM05D000010 ORTHO05D000063 7.5e-22 109.4 419 31.3
TAR636G1915 Trochodendron aralioides HOM05D000010 ORTHO05D025289 1.7e-21 108.2 266 36.1
unitig_52.g17701 Utricularia gibba HOM05D000010 ORTHO05D000063 3.7e-21 107.1 408 30.6
Potri.012G007500 Populus trichocarpa HOM05D000010 ORTHO05D000063 6.4e-21 106.3 379 31.7
MD00G1096600 Malus domestica HOM05D000010 ORTHO05D000063 8.3e-21 105.9 415 29.2
MD06G1124800 Malus domestica HOM05D000010 ORTHO05D000063 1.1e-20 105.5 413 29.3
Potri.015G004100 Populus trichocarpa HOM05D000010 ORTHO05D000063 1.1e-20 105.5 473 30.9
DCAR_010568 Daucus carota HOM05D000010 ORTHO05D000063 1.9e-20 104.8 406 31.0
Potri.011G149300 Populus trichocarpa HOM05D000010 ORTHO05D000063 1.9e-20 104.8 397 30.2
QL09p006487 Quercus lobata HOM05D000010 ORTHO05D000063 1.9e-20 104.8 472 29.7
Sabra12G0004300 Salix brachista HOM05D000010 ORTHO05D006020 2.4e-20 104.4 387 31.3
Sabra12G0008800 Salix brachista HOM05D000010 ORTHO05D006020 2.4e-20 104.4 387 31.3
Duzib068G0334 Durio zibethinus HOM05D000010 ORTHO05D000063 3.2e-20 104.0 412 30.1
FAN03G2367 Fragaria x ananassa HOM05D000617 ORTHO05D000478 3.2e-20 104.0 409 31.5
CiPaw.05G207100 Carya illinoinensis HOM05D000010 ORTHO05D000063 5.4e-20 103.2 177 44.1
CsaV3_4G008680 Cucumis sativus L. HOM05D000010 ORTHO05D000063 5.4e-20 103.2 384 30.7
COL.COLO4_14385 Corchorus olitorius HOM05D000617 ORTHO05D000478 7.0e-20 102.8 418 30.6
ClCG07G009650 Citrullus lanatus HOM05D000010 ORTHO05D000063 1.2e-19 102.1 368 32.1
unitig_0.g2438 Utricularia gibba HOM05D000010 ORTHO05D000063 2.0e-19 101.3 404 30.4
Lalb_Chr10g0103081 Lupinus albus HOM05D000010 ORTHO05D000063 2.7e-19 100.9 406 31.3
SGA_v2.0_scaffold44G16859 Striga asiatica HOM05D000010 ORTHO05D000063 2.7e-19 100.9 429 30.8
RcHm_v2.0_Chr1g0383091 Rosa chinensis HOM05D000010 ORTHO05D000063 3.5e-19 100.5 481 28.5
Prupe.2G320600 Prunus persica HOM05D000010 ORTHO05D000063 4.6e-19 100.1 372 28.8
Ciclev10019368m.g Citrus clementina HOM05D000010 ORTHO05D000063 6.0e-19 99.8 394 30.5
MELO3C024865.2 Cucumis melo HOM05D000010 ORTHO05D000063 6.0e-19 99.8 426 30.0
Manes.01G000155 Manihot esculenta HOM05D000010 ORTHO05D000063 6.0e-19 99.8 491 28.3
Sabra15G0002700 Salix brachista HOM05D002523 ORTHO05D002951 6.0e-19 99.8 443 30.7
Sabra16G0305800 Salix brachista HOM05D000010 ORTHO05D000063 7.8e-19 99.4 429 29.6
FAN10G0296 Fragaria x ananassa HOM05D000617 ORTHO05D000478 5.0e-18 96.7 405 31.9
FAN10G1892 Fragaria x ananassa HOM05D000617 ORTHO05D000478 5.0e-18 96.7 405 31.9
FvH4_7g33070 Fragaria vesca HOM05D000010 ORTHO05D000063 8.6e-18 95.9 472 29.7
MD07G1301800 Malus domestica HOM05D000010 ORTHO05D000063 8.6e-18 95.9 376 31.1
Oeu062808.1 Olea europaea HOM05D000010 ORTHO05D000063 1.1e-17 95.5 391 29.7
Potri.001G452700 Populus trichocarpa HOM05D000010 ORTHO05D000063 1.5e-17 95.1 431 29.0
TWI60G0454 Tripterygium wilfordii HOM05D000010 ORTHO05D000063 2.5e-17 94.4 436 26.8
ECA233G5536 Erigeron canadensis HOM05D000010 ORTHO05D000063 5.6e-17 93.2 414 29.0
TWI23G0690 Tripterygium wilfordii HOM05D000010 ORTHO05D000063 1.2e-16 92.0 498 27.5
Haze_00316 Corylus avellana HOM05D000010 ORTHO05D000063 1.6e-16 91.7 379 32.2
Haze_09219 Corylus avellana HOM05D000010 ORTHO05D000063 1.6e-16 91.7 446 29.1
Lsat_1_v5_gn_8_3961 Lactuca sativa HOM05D000010 ORTHO05D000063 2.1e-16 91.3 495 26.3
Cfa011884 Carpinus fangiana HOM05D000010 ORTHO05D000063 8.1e-16 89.4 454 29.3
Sabra11G0134400 Salix brachista HOM05D000010 ORTHO05D000063 8.1e-16 89.4 424 27.8
Atru.chr9.1829 Acer truncatum HOM05D000010 ORTHO05D000063 1.4e-15 88.6 439 28.2
GSVIVG01018260001 Vitis vinifera HOM05D000010 ORTHO05D000063 3.1e-15 87.4 238 34.5
Sed0010024 Sechium edule HOM05D000010 ORTHO05D000063 4.0e-15 87.0 369 30.9
PSO063G0581 Papaver somniferum HOM05D000010 ORTHO05D000063 5.2e-15 86.7 437 27.2
MD01G1229900 Malus domestica HOM05D000010 ORTHO05D000063 1.2e-14 85.5 397 29.5
PSO782G0496 Papaver somniferum HOM05D000010 ORTHO05D000063 1.2e-14 85.5 430 27.7
CSS0026183 Camellia sinensis var. sinensis HOM05D000010 ORTHO05D000063 1.5e-14 85.1 103 51.5
Psat2g064320 Pisum sativum HOM05D000010 ORTHO05D000063 1.5e-14 85.1 351 29.6
Gohir.D08G117200 Gossypium hirsutum HOM05D000010 ORTHO05D000063 4.4e-14 83.6 406 28.8
Gohir.A08G106000 Gossypium hirsutum HOM05D000010 ORTHO05D000063 9.9e-14 82.4 403 27.8
Duzib205G2011 Durio zibethinus HOM05D000010 ORTHO05D000063 2.2e-13 81.3 420 28.8
CiPaw.11G108400 Carya illinoinensis HOM05D000010 ORTHO05D000063 2.9e-13 80.9 395 26.3
Gohir.D12G243900 Gossypium hirsutum HOM05D000010 ORTHO05D000063 4.9e-13 80.1 400 27.5
HanXRQChr15g0496991 Helianthus annuus HOM05D000010 ORTHO05D000063 4.9e-13 80.1 191 37.7
Glyma.04G226700 Glycine max HOM05D000010 ORTHO05D000063 1.1e-12 79.0 414 28.3
QL12p003195 Quercus lobata HOM05D000010 ORTHO05D000063 1.1e-12 79.0 406 27.3
Gorai.004G125900 Gossypium raimondii HOM05D000010 ORTHO05D000063 1.4e-12 78.6 364 29.1
TWI81G0302 Tripterygium wilfordii HOM05D000010 ORTHO05D000063 1.4e-12 78.6 409 27.1
Ciclev10019282m.g Citrus clementina HOM05D000010 ORTHO05D000063 1.9e-12 78.2 368 29.1
Eucgr.A00969 Eucalyptus grandis HOM05D000010 ORTHO05D000063 1.9e-12 78.2 363 28.1
arahy.Tifrunner.gnm1.ann1.MFVS6B Arachis hypogaea HOM05D000010 ORTHO05D000063 4.1e-12 77.0 404 29.0
arahy.Tifrunner.gnm1.ann1.1UE66A Arachis hypogaea HOM05D000010 ORTHO05D000063 1.2e-11 75.5 421 27.6
CSS0044815 Camellia sinensis var. sinensis HOM05D000010 ORTHO05D000063 1.2e-11 75.5 136 43.4
arahy.Tifrunner.gnm1.ann1.H91V8V Arachis hypogaea HOM05D000010 ORTHO05D000063 2.7e-11 74.3 417 25.2
Gorai.008G261400 Gossypium raimondii HOM05D000010 ORTHO05D000063 2.7e-11 74.3 417 27.3
arahy.Tifrunner.gnm1.ann1.V20ZHW Arachis hypogaea HOM05D000010 ORTHO05D000063 3.5e-11 73.9 413 26.9
HanXRQChr10g0284011 Helianthus annuus HOM05D000010 ORTHO05D000063 3.5e-11 73.9 456 27.0
Ca_16792_v3 Cicer arietinum L. HOM05D000010 ORTHO05D000063 4.6e-11 73.6 435 26.7
Ca_16808_v3 Cicer arietinum L. HOM05D000010 ORTHO05D000063 4.6e-11 73.6 435 26.7
Duzib205G1826 Durio zibethinus HOM05D000010 ORTHO05D000063 1.3e-10 72.0 482 25.1
PGR042G1646 Punica granatum HOM05D000010 ORTHO05D000063 1.7e-10 71.6 346 28.6
THA.LOC104803316 Tarenaya hassleriana HOM05D000010 ORTHO05D000063 8.6e-10 69.3 222 32.9
TAR629G2610 Trochodendron aralioides HOM05D000010 ORTHO05D000063 8.6e-10 69.3 465 26.7
EL10Ac3g05150 Beta vulgaris HOM05D000010 ORTHO05D000063 1.1e-09 68.9 349 26.4
Gohir.D09G181800 Gossypium hirsutum HOM05D000010 ORTHO05D000063 1.1e-09 68.9 453 27.6
TAR629G0412 Trochodendron aralioides HOM05D000010 ORTHO05D000063 1.1e-09 68.9 205 34.6
DCAR_014566 Daucus carota HOM05D000010 ORTHO05D178172 1.9e-09 68.2 447 27.1
Gohir.D11G016700 Gossypium hirsutum HOM05D000010 ORTHO05D000063 2.5e-09 67.8 397 27.7
Gorai.006G203800 Gossypium raimondii HOM05D000010 ORTHO05D000063 2.5e-09 67.8 206 34.0
Gohir.A12G242900 Gossypium hirsutum HOM05D000010 ORTHO05D000063 3.3e-09 67.4 399 26.6
Oeu027877.1 Olea europaea HOM05D000010 ORTHO05D000063 3.3e-09 67.4 422 25.8
Gorai.007G017500 Gossypium raimondii HOM05D000010 ORTHO05D000063 4.3e-09 67.0 398 27.1
Cc08_g17070 Coffea canephora HOM05D000010 ORTHO05D000063 5.6e-09 66.6 472 26.7
Eucgr.E01095 Eucalyptus grandis HOM05D000010 ORTHO05D000063 5.6e-09 66.6 426 26.1
Gohir.A09G186966 Gossypium hirsutum HOM05D000010 ORTHO05D000063 5.6e-09 66.6 462 28.6
Hund09727 Selenicereus undatus HOM05D000010 ORTHO05D000063 9.5e-09 65.9 393 28.2
THA.LOC104809290 Tarenaya hassleriana HOM05D000010 ORTHO05D000063 9.5e-09 65.9 352 27.8
unitig_37.g11997 Utricularia gibba HOM05D000010 ORTHO05D000063 1.2e-08 65.5 422 25.1
Cfa016136 Carpinus fangiana HOM05D000010 ORTHO05D000063 1.6e-08 65.1 195 33.3
VMungo1309G2145 Vigna mungo HOM05D000010 ORTHO05D000063 2.1e-08 64.7 348 29.0
Glyma.06G138100 Glycine max HOM05D000010 ORTHO05D000063 2.8e-08 64.3 349 27.8
Ca_19981_v3 Cicer arietinum L. HOM05D000010 ORTHO05D000063 4.7e-08 63.5 498 25.5
Lalb_Chr17g0344831 Lupinus albus HOM05D000010 ORTHO05D000063 4.7e-08 63.5 350 28.0
Phvul.009G039000 Phaseolus vulgaris HOM05D000010 ORTHO05D000063 6.2e-08 63.2 348 28.2
Sc13g0010590 Simmondsia chinensis HOM05D000010 ORTHO05D000063 6.2e-08 63.2 364 26.4
Medtr5g069030 Medicago truncatula HOM05D000010 ORTHO05D000063 8.1e-08 62.8 374 27.0
Gohir.A11G016900 Gossypium hirsutum HOM05D000010 ORTHO05D000063 1.4e-07 62.0 453 27.6
COL.COLO4_10848 Corchorus olitorius HOM05D000010 ORTHO05D000063 1.8e-07 61.6 390 24.6
Aqoxy7G03618 Aquilegia oxysepala HOM05D000010 ORTHO05D000063 2.4e-07 61.2 459 24.8
PGR042G1846 Punica granatum HOM05D000010 ORTHO05D000063 2.4e-07 61.2 383 27.2
Thecc.03G215200 Theobroma cacao HOM05D000010 ORTHO05D000063 5.2e-07 60.1 531 24.1
Ah.13g070920 Amaranthus hybridus HOM05D000010 ORTHO05D000063 6.8e-07 59.7 361 25.8
Oeu017096.1 Olea europaea HOM05D000010 ORTHO05D000063 1.2e-06 58.9 366 26.2
AUR62005966 Chenopodium quinoa HOM05D000010 ORTHO05D000063 1.5e-06 58.5 356 26.7
CANSAT21G1474 Cannabis sativa HOM05D000010 ORTHO05D000063 2.0e-06 58.2 396 26.5
Psat5g070840 Pisum sativum HOM05D000010 ORTHO05D000063 2.0e-06 58.2 372 25.3
Sc19g0000470 Simmondsia chinensis HOM05D000010 ORTHO05D000063 2.0e-06 58.2 347 28.0
Duzib068G0323 Durio zibethinus HOM05D000010 ORTHO05D000063 3.4e-06 57.4 454 25.1
Gorai.003G073300 Gossypium raimondii HOM05D000010 ORTHO05D000063 3.4e-06 57.4 448 24.3
Carub.0005s1585 Capsella rubella HOM05D000010 ORTHO05D000063 4.4e-06 57.0 203 32.0
VMungo0647G2521 Vigna mungo HOM05D000010 ORTHO05D000063 4.4e-06 57.0 402 27.1
Gohir.D03G088500 Gossypium hirsutum HOM05D028865 ORTHO05D025289 7.6e-06 56.2 447 23.9
QL09p006632 Quercus lobata HOM05D000010 ORTHO05D337432 7.6e-06 56.2 157 33.8
TPR.G35915 Trifolium pratense HOM05D000010 ORTHO05D000063 7.6e-06 56.2 387 23.8


User provided reference genes

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