Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv19731 Davidia involucrata HOM05D002567 ORTHO05D007435 1.2e-222 776.2 401 100.0
Actinidia24843 Actinidia chinensis HOM05D002567 ORTHO05D007435 8.3e-150 534.3 347 79.3
CSS0018114 Camellia sinensis var. sinensis HOM05D002567 ORTHO05D007435 5.0e-147 525.0 345 78.6
CSS0004593 Camellia sinensis var. sinensis HOM05D002567 ORTHO05D007435 1.2e-145 520.4 345 78.0
Hma1.2p1_0399F.1_g143930 Hydrangea macrophylla HOM05D002567 ORTHO05D007435 2.7e-145 519.2 356 77.0
Rhsim01G0282400 Rhododendron simsii HOM05D002567 ORTHO05D007435 8.0e-145 517.7 347 77.8
GSVIVG01010968001 Vitis vinifera HOM05D002567 ORTHO05D007435 2.6e-143 512.7 352 75.0
Cfa005987 Carpinus fangiana HOM05D002567 ORTHO05D007435 1.1e-141 507.3 345 75.1
TWI14G0999 Tripterygium wilfordii HOM05D002567 ORTHO05D007435 3.1e-141 505.8 345 73.6
TAR365G0282 Trochodendron aralioides HOM05D002567 ORTHO05D007435 5.9e-140 501.5 345 75.1
Thecc.01G294000 Theobroma cacao HOM05D002567 ORTHO05D007435 2.9e-139 499.2 344 72.1
CiPaw.07G103700 Carya illinoinensis HOM05D002567 ORTHO05D007435 3.8e-139 498.8 345 73.3
Cc01_g20520 Coffea canephora HOM05D002567 ORTHO05D007435 9.5e-138 494.2 345 72.5
vmacro14988 Vaccinium macrocarpon HOM05D002567 ORTHO05D007435 9.5e-138 494.2 347 73.8
Cpa.g.sc9.190 Carica papaya HOM05D002567 ORTHO05D007435 1.4e-136 490.3 346 72.8
CANSAT25G3369 Cannabis sativa HOM05D002567 ORTHO05D007435 1.8e-136 490.0 345 73.3
Sed0025005 Sechium edule HOM05D002567 ORTHO05D007435 3.0e-136 489.2 345 73.0
QL12p030562 Quercus lobata HOM05D002567 ORTHO05D007435 5.2e-136 488.4 345 72.2
ClCG09G006190 Citrullus lanatus HOM05D002567 ORTHO05D007435 1.2e-135 487.3 349 71.9
MD03G1284200 Malus domestica HOM05D002567 ORTHO05D007435 7.5e-135 484.6 344 72.1
Manes.05G065800 Manihot esculenta HOM05D002567 ORTHO05D007435 2.2e-134 483.0 345 73.3
Ciclev10019856m.g Citrus clementina HOM05D002567 ORTHO05D007435 2.9e-134 482.6 345 74.2
SalBow3G3633 Salvia bowleyana HOM05D002567 ORTHO05D007435 2.9e-134 482.6 345 70.1
Phvul.007G165166 Phaseolus vulgaris HOM05D002567 ORTHO05D007435 4.9e-134 481.9 345 72.2
Prupe.8G255700 Prunus persica HOM05D002567 ORTHO05D007435 4.9e-134 481.9 350 71.4
Hund05401 Selenicereus undatus HOM05D002567 ORTHO05D007435 1.1e-133 480.7 365 70.4
COL.COLO4_07998 Corchorus olitorius HOM05D002567 ORTHO05D006538 1.4e-133 480.3 346 69.9
PGSC0003DMG402011364 Solanum tuberosum HOM05D002567 ORTHO05D007435 1.4e-133 480.3 345 70.7
TPR.G33972 Trifolium pratense HOM05D002567 ORTHO05D007435 1.8e-133 479.9 345 71.6
Oeu046707.1 Olea europaea HOM05D002567 ORTHO05D007435 3.2e-133 479.2 345 72.2
Sopen09g029600 Solanum pennellii HOM05D002567 ORTHO05D007435 3.2e-133 479.2 345 70.7
Medtr1g088870 Medicago truncatula HOM05D002567 ORTHO05D007435 7.0e-133 478.0 345 71.3
Ca_10357_v3 Cicer arietinum L. HOM05D002567 ORTHO05D007435 1.2e-132 477.2 345 71.6
Eucgr.K03452 Eucalyptus grandis HOM05D002567 ORTHO05D007435 1.2e-132 477.2 344 70.6
Lj2C1189T5 Lonicera japonica HOM05D002567 ORTHO05D007435 2.7e-132 476.1 360 71.4
Aqoxy5G00699 Aquilegia oxysepala HOM05D002567 ORTHO05D007435 5.9e-132 474.9 346 71.1
Gohir.D08G083800 Gossypium hirsutum HOM05D002567 ORTHO05D007435 7.8e-132 474.6 342 69.9
SGA_v2.0_scaffold1G00388 Striga asiatica HOM05D002567 ORTHO05D007435 2.3e-131 473.0 344 70.9
Lalb_Chr06g0163361 Lupinus albus HOM05D002567 ORTHO05D007435 3.9e-131 472.2 345 70.1
VMungo0720G1827 Vigna mungo HOM05D002567 ORTHO05D007435 1.1e-130 470.7 345 69.3
Gohir.A08G074500 Gossypium hirsutum HOM05D002567 ORTHO05D007435 2.5e-130 469.5 342 69.6
Glyma.10G020300 Glycine max HOM05D002567 ORTHO05D007435 1.6e-129 466.8 346 70.8
Migut.D00184 Erythranthe guttata HOM05D002567 ORTHO05D007435 2.8e-129 466.1 344 67.4
Nitab4.5_0001697g0140 Nicotiana tabacum HOM05D002567 ORTHO05D006538 2.8e-129 466.1 386 63.7
FvH4_c6g00080 Fragaria vesca HOM05D002567 ORTHO05D007435 4.7e-129 465.3 344 68.9
Nn5g30061 Nelumbo nucifera HOM05D002567 ORTHO05D007435 4.7e-129 465.3 344 70.1
FvH4_c6g00110 Fragaria vesca HOM05D002567 ORTHO05D007435 1.4e-128 463.8 332 71.1
PSO832G0331 Papaver somniferum HOM05D002567 ORTHO05D007435 3.1e-128 462.6 345 69.3
RcHm_v2.0_Chr6g0293181 Rosa chinensis HOM05D002567 ORTHO05D007435 3.1e-128 462.6 344 69.2
FAN20G2691 Fragaria x ananassa HOM05D002567 ORTHO05D007435 1.5e-127 460.3 362 65.7
Aa31LG1G29180 Aethionema arabicum HOM05D002567 ORTHO05D007435 5.8e-127 458.4 344 69.5
Gorai.004G088200 Gossypium raimondii HOM05D002567 ORTHO05D007435 5.8e-127 458.4 366 65.3
FAN24G0883 Fragaria x ananassa HOM05D002567 ORTHO05D007435 9.8e-127 457.6 362 65.7
Lj5g0023248 Lotus japonicus HOM05D002567 ORTHO05D007435 1.3e-126 457.2 344 68.3
THA.LOC104817512 Tarenaya hassleriana HOM05D002567 ORTHO05D007435 2.2e-126 456.4 345 68.1
Glyma.02G153800 Glycine max HOM05D002567 ORTHO05D007435 2.9e-126 456.1 345 69.3
Sc05g0004310 Simmondsia chinensis HOM05D002567 ORTHO05D007435 4.9e-126 455.3 344 68.9
DCAR_012404 Daucus carota HOM05D002567 ORTHO05D007435 2.7e-124 449.5 347 66.9
BcaB01g03155 Brassica carinata HOM05D002567 ORTHO05D007435 6.0e-124 448.4 344 67.7
CARHR143220 Cardamine hirsuta HOM05D002567 ORTHO05D007435 1.7e-123 446.8 345 67.8
Thhalv10001431m.g Eutrema salsugineum HOM05D002567 ORTHO05D007435 2.3e-123 446.4 344 68.0
PGR044G2614 Punica granatum HOM05D002567 ORTHO05D007435 2.5e-122 443.0 344 67.2
ATR0706G146 Amborella trichopoda HOM05D002567 ORTHO05D007435 3.3e-122 442.6 350 68.0
Haze_04858 Corylus avellana HOM05D002567 ORTHO05D006538 7.3e-122 441.4 344 68.9
FAN15G3695 Fragaria x ananassa HOM05D002567 ORTHO05D007435 2.1e-121 439.9 399 59.9
A03p26080 Brassica napus HOM05D002567 ORTHO05D007435 2.8e-121 439.5 344 66.9
BraA03t11823Z Brassica rapa HOM05D002567 ORTHO05D007435 6.2e-121 438.3 344 66.9
AL4G47410 Arabidopsis lyrata HOM05D002567 ORTHO05D007435 1.4e-120 437.2 344 66.3
ECA248G3501 Erigeron canadensis HOM05D002567 ORTHO05D007435 3.1e-120 436.0 343 64.4
Os03g0346800 Oryza sativa ssp. japonica HOM05D002567 ORTHO05D007435 3.1e-120 436.0 344 64.8
C03p31100 Brassica napus HOM05D002567 ORTHO05D007435 1.2e-119 434.1 344 66.0
Duzib133G1128 Durio zibethinus HOM05D002567 ORTHO05D007435 1.2e-119 434.1 344 64.8
Sp4g29760 Schrenkiella parvula HOM05D002567 ORTHO05D007435 1.2e-119 434.1 345 66.7
BolC3t15458H Brassica oleracea HOM05D002567 ORTHO05D007435 2.6e-119 433.0 344 65.7
CsaV3_7G028940 Cucumis sativus L. HOM05D002567 ORTHO05D007435 4.4e-119 432.2 315 72.1
BcaC01g05016 Brassica carinata HOM05D002567 ORTHO05D007435 7.5e-119 431.4 344 65.7
AUR62043263 Chenopodium quinoa HOM05D002567 ORTHO05D007435 1.1e-117 427.6 344 66.6
AT2G47830 Arabidopsis thaliana HOM05D002567 ORTHO05D007435 7.1e-117 424.9 344 65.4
AUR62033190 Chenopodium quinoa HOM05D002567 ORTHO05D007435 6.0e-116 421.8 344 66.0
CAN.G1562.6 Capsicum annuum HOM05D002567 ORTHO05D007435 1.7e-115 420.2 344 63.4
Nitab4.5_0001447g0040 Nicotiana tabacum HOM05D002567 ORTHO05D007435 5.1e-115 418.7 345 63.5
HanXRQChr01g0001661 Helianthus annuus HOM05D002567 ORTHO05D007435 9.9e-111 404.4 328 64.9
Carub.0004s3055 Capsella rubella HOM05D002567 ORTHO05D007435 3.8e-110 402.5 329 63.8
Lsat_1_v5_gn_5_189341 Lactuca sativa HOM05D002567 ORTHO05D007435 6.4e-110 401.7 334 61.7
Potri.002G209023 Populus trichocarpa HOM05D002567 ORTHO05D007435 1.6e-108 397.1 282 71.3
Sed0015917 Sechium edule HOM05D002567 ORTHO05D007435 7.8e-108 394.8 330 63.9
Ah.15g093860 Amaranthus hybridus HOM05D002567 ORTHO05D007435 3.5e-100 369.4 344 58.7
Psat6g167000 Pisum sativum HOM05D002567 ORTHO05D007435 1.2e-92 344.4 206 81.6
Zm00001eb016640 Zea mays HOM05D002567 ORTHO05D007435 2.1e-92 343.6 271 63.8
CDE02G2579 Ceratophyllum demersum HOM05D002567 ORTHO05D007435 1.1e-88 331.3 306 58.5
AUR62033191 Chenopodium quinoa HOM05D002567 ORTHO05D007435 1.1e-85 321.2 240 69.6
MELO3C016044.2 Cucumis melo HOM05D002567 ORTHO05D007435 1.6e-84 317.4 344 55.8
Mapoly0007s0103 Marchantia polymorpha HOM05D002567 ORTHO05D007435 1.1e-82 311.2 240 60.8
HPP92_011840 Vanilla planifolia HOM05D002567 ORTHO05D007435 3.1e-80 303.1 212 67.9
Pp3c10_1060 Physcomitrium patens HOM05D002567 ORTHO05D007435 1.1e-77 294.7 408 42.9
Pp3c14_1830 Physcomitrium patens HOM05D002567 ORTHO05D007435 5.5e-77 292.4 419 41.3
Solyc09g074750.3 Solanum lycopersicum HOM05D002567 ORTHO05D007435 1.2e-76 291.2 228 64.5
SMO145G0291 Selaginella moellendorffii HOM05D002567 ORTHO05D007435 2.7e-76 290.0 239 60.7
Peaxi162Scf00067g01819 Petunia axillaris HOM05D002567 ORTHO05D007435 6.0e-76 288.9 223 65.5
Atru.chr5.1230 Acer truncatum HOM05D002567 ORTHO05D007435 4.1e-64 249.6 202 66.3
Solyc09g074740.2 Solanum lycopersicum HOM05D002567 ORTHO05D007435 4.5e-47 193.0 127 77.2
Peaxi162Scf00067g01814 Petunia axillaris HOM05D002567 ORTHO05D007435 1.0e-46 191.8 151 68.2
Atru.chr5.1231 Acer truncatum HOM05D002567 ORTHO05D007435 1.1e-45 188.3 122 75.4
FAN19G1365 Fragaria x ananassa HOM05D002567 ORTHO05D007435 6.1e-44 182.6 119 71.4
arahy.Tifrunner.gnm1.ann1.XK0FMC Arachis hypogaea HOM05D002567 ORTHO05D007435 5.0e-30 136.3 244 40.2
DCAR_017872 Daucus carota HOM05D002567 ORTHO05D007435 4.4e-26 123.2 76 73.7
CAN.G1349.13 Capsicum annuum HOM05D000586 ORTHO05D007435 5.4e-24 116.3 106 59.4
Nitab4.5_0011064g0040 Nicotiana tabacum HOM05D002567 ORTHO05D007435 5.0e-22 109.8 108 58.3
Duzib133G1109 Durio zibethinus HOM05D002567 ORTHO05D007435 7.3e-21 105.9 94 54.3
CARHR055860 Cardamine hirsuta HOM05D002567 ORTHO05D007435 3.6e-20 103.6 92 60.9
MCO08G095 Micromonas commoda HOM05D002567 ORTHO05D007435 1.4e-19 101.7 158 38.6
Duzib133G0811 Durio zibethinus HOM05D002567 ORTHO05D007435 1.8e-19 101.3 94 53.2
Ciclev10006598m.g Citrus clementina HOM05D002567 ORTHO05D007435 2.3e-19 100.9 63 84.1
CARHR220570 Cardamine hirsuta HOM05D002567 ORTHO05D007435 2.0e-18 97.8 95 56.8
Cfa024758 Carpinus fangiana HOM05D002567 ORTHO05D007435 2.0e-18 97.8 265 29.8
PRCOL_00000973 Prasinoderma coloniale HOM05D002567 ORTHO05D007435 9.2e-16 89.0 252 28.2
Nitab4.5_0005578g0030 Nicotiana tabacum HOM05D002567 ORTHO05D007435 2.5e-13 80.9 84 53.6
CAN.G312.11 Capsicum annuum HOM05D000586 ORTHO05D003356 2.3e-11 74.3 54 70.4
Sopen09g029580 Solanum pennellii HOM05D002567 ORTHO05D007435 1.3e-09 68.6 48 72.9
EL10Ac7g17491 Beta vulgaris HOM05D002567 ORTHO05D007435 1.7e-09 68.2 41 78.0
arahy.Tifrunner.gnm1.ann1.66ANXA Arachis hypogaea HOM05D002567 ORTHO05D007435 1.4e-08 65.1 61 52.5
arahy.Tifrunner.gnm1.ann1.1E45SP Arachis hypogaea HOM05D000870 ORTHO05D000715 3.2e-08 63.9 160 26.9
arahy.Tifrunner.gnm1.ann1.3T6XNU Arachis hypogaea HOM05D000870 ORTHO05D000715 3.2e-08 63.9 160 26.9
CAN.G2.56 Capsicum annuum HOM05D000586 ORTHO05D003356 7.0e-08 62.8 78 51.3
AUR62042552 Chenopodium quinoa HOM05D004615 ORTHO05D000004 7.0e-08 62.8 41 65.9
Ca_16274_v3 Cicer arietinum L. HOM05D000870 ORTHO05D000715 9.2e-08 62.4 182 25.8
Glyma.09G122600 Glycine max HOM05D000870 ORTHO05D000715 4.6e-07 60.1 154 27.9
Lsat_1_v5_gn_5_86321 Lactuca sativa HOM05D000295 ORTHO05D001778 4.6e-07 60.1 36 80.6
Psat5g111840 Pisum sativum HOM05D000870 ORTHO05D000715 1.0e-06 58.9 165 27.9
AUR62040423 Chenopodium quinoa HOM05D000107 ORTHO05D000062 1.3e-06 58.5 37 67.6
CANSAT56G0490 Cannabis sativa HOM05D000870 ORTHO05D000715 1.7e-06 58.2 155 25.2
SEGI_29117 Sequoiadendron giganteum HOM05D002567 ORTHO05D007435 1.7e-06 58.2 62 43.5
Lalb_Chr03g0030331 Lupinus albus HOM05D000870 ORTHO05D000715 3.9e-06 57.0 154 27.3
Cpa.g.sc32.72 Carica papaya HOM05D000870 ORTHO05D000715 5.0e-06 56.6 150 24.0
HPP92_021858 Vanilla planifolia HOM05D000870 ORTHO05D000715 6.6e-06 56.2 150 25.3


User provided reference genes

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