Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv19653 Davidia involucrata HOM05D004535 ORTHO05D005341 0.0e+00 3608.5 1821 100.0
Hma1.2p1_0193F.1_g084240 Hydrangea macrophylla HOM05D004535 ORTHO05D005341 0.0e+00 3145.5 1821 86.7
GSVIVG01014769001 Vitis vinifera HOM05D004535 ORTHO05D005341 0.0e+00 3143.2 1821 87.1
CSS0018371 Camellia sinensis var. sinensis HOM05D004535 ORTHO05D005341 0.0e+00 3135.9 1822 87.0
Rhsim04G0008600 Rhododendron simsii HOM05D004535 ORTHO05D005341 0.0e+00 3099.3 1838 84.9
Prupe.6G032900 Prunus persica HOM05D004535 ORTHO05D005341 0.0e+00 3030.4 1821 83.3
Lj1C898T24 Lonicera japonica HOM05D004535 ORTHO05D005341 0.0e+00 3029.6 1840 83.4
vmacro09603 Vaccinium macrocarpon HOM05D004535 ORTHO05D005341 0.0e+00 3028.8 1930 80.4
Atru.chr2.3782 Acer truncatum HOM05D004535 ORTHO05D005341 0.0e+00 3024.6 1822 83.3
TAR627G0331 Trochodendron aralioides HOM05D004535 ORTHO05D005341 0.0e+00 3008.4 1821 83.0
MD11G1042000 Malus domestica HOM05D004535 ORTHO05D005341 0.0e+00 2983.4 1821 82.0
Ciclev10007234m.g Citrus clementina HOM05D004535 ORTHO05D005341 0.0e+00 2982.6 1827 81.7
CiPaw.11G209600 Carya illinoinensis HOM05D004535 ORTHO05D005341 0.0e+00 2979.5 1823 82.3
RcHm_v2.0_Chr5g0075021 Rosa chinensis HOM05D004535 ORTHO05D005341 0.0e+00 2973.3 1824 81.6
MD03G1040600 Malus domestica HOM05D004535 ORTHO05D005341 0.0e+00 2957.9 1821 81.5
FAN11G1653 Fragaria x ananassa HOM05D004535 ORTHO05D005341 0.0e+00 2956.8 1824 81.4
FAN16G2454 Fragaria x ananassa HOM05D004535 ORTHO05D005341 0.0e+00 2954.1 1824 81.4
FAN21G2952 Fragaria x ananassa HOM05D004535 ORTHO05D005341 0.0e+00 2949.1 1824 81.2
FAN25G2892 Fragaria x ananassa HOM05D004535 ORTHO05D005341 0.0e+00 2949.1 1824 81.2
CANSAT11G1644 Cannabis sativa HOM05D004535 ORTHO05D005341 0.0e+00 2948.3 1823 81.4
Manes.01G005500 Manihot esculenta HOM05D004535 ORTHO05D005341 0.0e+00 2938.7 1822 81.3
Potri.001G470600 Populus trichocarpa HOM05D004535 ORTHO05D005341 0.0e+00 2929.8 1822 80.3
Thecc.07G003100 Theobroma cacao HOM05D004535 ORTHO05D005341 0.0e+00 2917.1 1768 82.7
Gorai.009G454100 Gossypium raimondii HOM05D004535 ORTHO05D005341 0.0e+00 2907.9 1809 81.3
TWI38G2299 Tripterygium wilfordii HOM05D004535 ORTHO05D005341 0.0e+00 2900.2 1823 80.4
QL08p000781 Quercus lobata HOM05D004535 ORTHO05D005341 0.0e+00 2882.8 2056 73.1
Haze_09903 Corylus avellana HOM05D004535 ORTHO05D005341 0.0e+00 2878.2 1861 79.4
FvH4_3g41830 Fragaria vesca HOM05D004535 ORTHO05D005341 0.0e+00 2845.5 1761 81.1
Gohir.D05G387450 Gossypium hirsutum HOM05D004535 ORTHO05D005341 0.0e+00 2842.8 1809 80.0
Duzib213G0320 Durio zibethinus HOM05D004535 ORTHO05D005341 0.0e+00 2836.2 1822 79.1
Eucgr.F02001 Eucalyptus grandis HOM05D004535 ORTHO05D005341 0.0e+00 2831.6 1821 77.6
Sopen07g034220 Solanum pennellii HOM05D004535 ORTHO05D005341 0.0e+00 2830.4 1821 77.5
PGR083G0052 Punica granatum HOM05D004535 ORTHO05D005341 0.0e+00 2829.7 1821 77.3
Solyc07g066030.4 Solanum lycopersicum HOM05D004535 ORTHO05D005341 0.0e+00 2829.3 1821 77.4
Sabra11G0138700 Salix brachista HOM05D004535 ORTHO05D005341 0.0e+00 2827.0 1977 73.1
Cc05_g15580 Coffea canephora HOM05D004535 ORTHO05D005341 0.0e+00 2811.6 1827 77.3
Glyma.18G071500 Glycine max HOM05D004535 ORTHO05D005341 0.0e+00 2804.6 1824 76.6
Psat5g164120 Pisum sativum HOM05D004535 ORTHO05D005341 0.0e+00 2800.8 1825 76.8
Glyma.08G336400 Glycine max HOM05D004535 ORTHO05D005341 0.0e+00 2793.8 1825 76.5
Lj6g0015552 Lotus japonicus HOM05D004535 ORTHO05D005341 0.0e+00 2790.8 1824 76.3
HanXRQChr03g0079281 Helianthus annuus HOM05D004535 ORTHO05D005341 0.0e+00 2788.4 1824 77.0
Medtr3g461520 Medicago truncatula HOM05D004535 ORTHO05D005341 0.0e+00 2782.7 1824 76.0
Lalb_Chr18g0050431 Lupinus albus HOM05D004535 ORTHO05D005341 0.0e+00 2780.0 1824 76.1
Migut.M01591 Erythranthe guttata HOM05D004535 ORTHO05D005341 0.0e+00 2778.0 1821 76.7
Lalb_Chr20g0115261 Lupinus albus HOM05D004535 ORTHO05D005341 0.0e+00 2776.1 1824 76.4
Aqoxy4G02281 Aquilegia oxysepala HOM05D004535 ORTHO05D005341 0.0e+00 2768.0 1821 75.6
Sed0018073 Sechium edule HOM05D004535 ORTHO05D005341 0.0e+00 2766.5 1822 76.2
ECA240G2049 Erigeron canadensis HOM05D004535 ORTHO05D005341 0.0e+00 2760.3 1821 76.6
Phvul.006G061700 Phaseolus vulgaris HOM05D004535 ORTHO05D005341 0.0e+00 2760.3 1824 75.2
ClCG10G004180 Citrullus lanatus HOM05D004535 ORTHO05D005341 0.0e+00 2749.5 1833 75.9
Nitab4.5_0001303g0050 Nicotiana tabacum HOM05D004535 ORTHO05D005341 0.0e+00 2745.3 1807 76.2
TPR.G14720 Trifolium pratense HOM05D004535 ORTHO05D005341 0.0e+00 2738.4 1823 74.7
Oeu013013.2 Olea europaea HOM05D004535 ORTHO05D005341 0.0e+00 2736.8 1897 74.2
MSTRG.15824 Avicennia marina HOM05D004535 ORTHO05D005341 0.0e+00 2736.1 1821 75.1
PSO210G5731 Papaver somniferum HOM05D004535 ORTHO05D005341 0.0e+00 2728.7 1821 75.2
MELO3C014086.2 Cucumis melo HOM05D004535 ORTHO05D005341 0.0e+00 2728.0 1822 75.5
THA.LOC104822705 Tarenaya hassleriana HOM05D004535 ORTHO05D005341 0.0e+00 2714.1 1824 75.0
arahy.Tifrunner.gnm1.ann1.DDNH16 Arachis hypogaea HOM05D004535 ORTHO05D005341 0.0e+00 2712.6 1906 72.1
Gohir.A04G001901 Gossypium hirsutum HOM05D004535 ORTHO05D005341 0.0e+00 2712.2 1680 82.1
Thhalv10019881m.g Eutrema salsugineum HOM05D004535 ORTHO05D005341 0.0e+00 2705.2 1825 75.3
Sc20g0000040 Simmondsia chinensis HOM05D004535 ORTHO05D005341 0.0e+00 2701.0 1823 74.1
CsaV3_3G003990 Cucumis sativus L. HOM05D004535 ORTHO05D005341 0.0e+00 2699.5 1822 74.9
BcaB04g18753 Brassica carinata HOM05D004535 ORTHO05D005341 0.0e+00 2698.7 1824 74.5
Lsat_1_v5_gn_9_89621 Lactuca sativa HOM05D004535 ORTHO05D005341 0.0e+00 2693.7 1818 75.5
AL3G25150 Arabidopsis lyrata HOM05D004535 ORTHO05D005341 0.0e+00 2692.5 1824 74.4
SalBow8G3417 Salvia bowleyana HOM05D004535 ORTHO05D005341 0.0e+00 2682.9 1850 74.0
AT3G13330 Arabidopsis thaliana HOM05D004535 ORTHO05D005341 0.0e+00 2680.2 1825 74.2
Carub.0003s1271 Capsella rubella HOM05D004535 ORTHO05D005341 0.0e+00 2680.2 1825 74.1
BcaC01g03999 Brassica carinata HOM05D004535 ORTHO05D005341 0.0e+00 2679.4 1824 74.3
BolC3t16899H Brassica oleracea HOM05D004535 ORTHO05D005341 0.0e+00 2677.9 1825 74.2
AUR62035634 Chenopodium quinoa HOM05D004535 ORTHO05D005341 0.0e+00 2677.5 1825 73.5
BraA03t12967Z Brassica rapa HOM05D004535 ORTHO05D005341 0.0e+00 2675.6 1824 74.0
A03p38140 Brassica napus HOM05D004535 ORTHO05D005341 0.0e+00 2672.1 1824 73.9
EL10Ac4g07499 Beta vulgaris HOM05D004535 ORTHO05D005341 0.0e+00 2671.0 1817 73.3
C03p46300 Brassica napus HOM05D004535 ORTHO05D005341 0.0e+00 2670.6 1824 74.1
AUR62017172 Chenopodium quinoa HOM05D004535 ORTHO05D005341 0.0e+00 2668.6 1837 72.7
VMungo0540G2510 Vigna mungo HOM05D004535 ORTHO05D005341 0.0e+00 2668.3 1769 75.6
Actinidia03667 Actinidia chinensis HOM05D004535 ORTHO05D005341 0.0e+00 2667.5 1568 86.9
Peaxi162Scf00232g00530 Petunia axillaris HOM05D004535 ORTHO05D005341 0.0e+00 2664.0 1839 73.8
MBI15_g37116_MAGBIO Magnolia biondii HOM05D004535 ORTHO05D005341 0.0e+00 2661.7 1795 75.2
Sp3g11530 Schrenkiella parvula HOM05D004535 ORTHO05D005341 0.0e+00 2657.5 1824 73.4
Aa31LG8G550 Aethionema arabicum HOM05D004535 ORTHO05D005341 0.0e+00 2656.7 1824 73.6
HanXRQChr13g0409231 Helianthus annuus HOM05D004535 ORTHO05D005341 0.0e+00 2655.9 1821 73.9
CARHR087940 Cardamine hirsuta HOM05D004535 ORTHO05D005341 0.0e+00 2654.8 1826 73.8
QL08p000755 Quercus lobata HOM05D004535 ORTHO05D005341 0.0e+00 2642.5 1949 70.1
DCAR_013765 Daucus carota HOM05D004535 ORTHO05D005341 0.0e+00 2617.0 1821 73.6
Nn1g08312 Nelumbo nucifera HOM05D004535 ORTHO05D005341 0.0e+00 2617.0 1629 81.2
SalBow8G2487 Salvia bowleyana HOM05D004535 ORTHO05D005341 0.0e+00 2607.0 1830 72.3
Hund22978 Selenicereus undatus HOM05D004535 ORTHO05D005341 0.0e+00 2567.3 1821 71.3
Medtr3g461500 Medicago truncatula HOM05D004535 ORTHO05D005341 0.0e+00 2551.5 1860 70.0
Haze_09904 Corylus avellana HOM05D004535 ORTHO05D005341 0.0e+00 2548.5 1908 69.7
Ah.06g180940 Amaranthus hybridus HOM05D004535 ORTHO05D005341 0.0e+00 2513.0 1844 68.6
Nitab4.5_0000152g0130 Nicotiana tabacum HOM05D004535 ORTHO05D005341 0.0e+00 2484.9 1656 76.0
ATR0751G071 Amborella trichopoda HOM05D004535 ORTHO05D005341 0.0e+00 2434.8 1826 67.9
HPP92_018915 Vanilla planifolia HOM05D004535 ORTHO05D005341 0.0e+00 2426.4 1831 67.0
Cpa.g.sc12.80 Carica papaya HOM05D004535 ORTHO05D005341 0.0e+00 2334.7 1745 70.5
CiPaw.12G142100 Carya illinoinensis HOM05D004535 ORTHO05D005341 0.0e+00 2329.3 1681 70.8
Ca_14867_v3 Cicer arietinum L. HOM05D004535 ORTHO05D005341 0.0e+00 2285.8 1520 74.9
arahy.Tifrunner.gnm1.ann1.HJC4WF Arachis hypogaea HOM05D004535 ORTHO05D005341 0.0e+00 2218.0 1442 76.1
Zm00001eb281130 Zea mays HOM05D004535 ORTHO05D005341 0.0e+00 2196.8 1821 60.8
MD00G1206400 Malus domestica HOM05D004535 ORTHO05D005341 0.0e+00 2007.3 1254 80.5
Potri.011G167700 Populus trichocarpa HOM05D004535 ORTHO05D005341 0.0e+00 1900.2 1148 80.8
CDE05G3236 Ceratophyllum demersum HOM05D004535 ORTHO05D005341 0.0e+00 1877.8 1451 66.4
unitig_699.g19598 Utricularia gibba HOM05D004535 ORTHO05D005341 0.0e+00 1818.5 1822 54.8
PGSC0003DMG401022150 Solanum tuberosum HOM05D004535 ORTHO05D005341 0.0e+00 1515.7 946 77.7
Pp3c20_11540 Physcomitrium patens HOM05D004535 ORTHO05D005341 0.0e+00 1430.6 1860 43.2
Mapoly0071s0029 Marchantia polymorpha HOM05D004535 ORTHO05D005341 0.0e+00 1409.8 1931 41.9
AagrBONN_evm.TU.Sc2ySwM_228.5886 Anthoceros agrestis HOM05D004535 ORTHO05D005341 0.0e+00 1404.0 1866 42.8
Mapoly0069s0005 Marchantia polymorpha HOM05D004535 ORTHO05D005341 0.0e+00 1360.9 1880 40.7
CAN.G623.63 Capsicum annuum HOM05D004535 ORTHO05D005341 0.0e+00 1288.9 866 76.8
Pp3c15_5520 Physcomitrium patens HOM05D004535 ORTHO05D005341 0.0e+00 1244.2 1852 39.5
SMO184G0002 Selaginella moellendorffii HOM05D004535 ORTHO05D005341 0.0e+00 1191.0 1871 38.4
SMO340G0109 Selaginella moellendorffii HOM05D004535 ORTHO05D005341 0.0e+00 1154.0 1845 37.2
CAN.G623.64 Capsicum annuum HOM05D004535 ORTHO05D005341 0.0e+00 1130.5 947 63.8
SMO239G0001 Selaginella moellendorffii HOM05D004535 ORTHO05D005341 0.0e+00 1080.5 1858 36.2
Ca_14861_v3 Cicer arietinum L. HOM05D004535 ORTHO05D005341 1.2e-311 1074.7 715 74.4
COL.COLO4_07778 Corchorus olitorius HOM05D004535 ORTHO05D005341 5.2e-292 1008.8 1169 51.8
CBR_g24134 Chara braunii HOM05D004535 ORTHO05D005341 7.3e-278 961.8 1974 33.0
Os06g0301300 Oryza sativa ssp. japonica HOM05D004535 ORTHO05D005341 1.6e-264 917.5 694 64.6
Potri.011G167650 Populus trichocarpa HOM05D004535 ORTHO05D005341 7.9e-216 755.7 507 76.1
Actinidia00829 Actinidia chinensis HOM05D004535 ORTHO05D005341 1.6e-200 704.9 638 64.9
QL10p044954 Quercus lobata HOM05D004535 ORTHO05D005341 9.9e-150 536.2 645 51.3
SEGI_13123 Sequoiadendron giganteum HOM05D004535 ORTHO05D005341 1.2e-142 512.7 458 55.2
Ca_14860_v3 Cicer arietinum L. HOM05D004535 ORTHO05D005341 5.4e-132 477.2 341 72.7
MCO11G531 Micromonas commoda HOM05D004535 ORTHO05D005341 8.7e-122 443.4 1928 25.3
VMungo0540G1109 Vigna mungo HOM05D004535 ORTHO05D005341 8.7e-122 443.4 322 68.9
Actinidia00827 Actinidia chinensis HOM05D004535 ORTHO05D005341 1.3e-120 439.5 303 74.6
SEGI_38328 Sequoiadendron giganteum HOM05D004535 ORTHO05D005341 1.9e-116 425.6 471 49.7
MD00G1206600 Malus domestica HOM05D004535 ORTHO05D005341 1.2e-107 396.4 220 83.2
VMungo1127G2045 Vigna mungo HOM05D004535 ORTHO05D005341 8.2e-104 383.6 272 71.7
MD00G1206500 Malus domestica HOM05D004535 ORTHO05D005341 3.4e-102 378.3 252 80.6
Actinidia03668 Actinidia chinensis HOM05D004535 ORTHO05D005341 2.0e-89 335.9 226 73.5
SEGI_32129 Sequoiadendron giganteum HOM05D004535 ORTHO05D005341 9.4e-84 317.0 361 53.2
PRCOL_00006556 Prasinoderma coloniale HOM05D004535 ORTHO05D005341 1.6e-83 316.2 1687 23.7
Nn1g08306 Nelumbo nucifera HOM05D004535 ORTHO05D005341 9.1e-79 300.4 166 86.1
arahy.Tifrunner.gnm1.ann1.P6R29M Arachis hypogaea HOM05D004535 ORTHO05D005341 1.6e-78 299.7 345 51.6
Actinidia00828 Actinidia chinensis HOM05D004535 ORTHO05D005341 4.1e-39 168.7 210 51.0
Cpa.g.sc12.82 Carica papaya HOM05D004535 ORTHO05D005341 1.2e-38 167.2 94 87.2
SEGI_15666 Sequoiadendron giganteum HOM05D004535 ORTHO05D005341 1.2e-38 167.2 140 65.0
Cfa027001 Carpinus fangiana HOM05D004535 ORTHO05D005341 2.0e-33 149.8 1770 21.0
Cre14.g628702 Chlamydomonas reinhardtii HOM05D004535 ORTHO05D005341 1.3e-32 147.1 652 24.5
arahy.Tifrunner.gnm1.ann1.A7P7U5 Arachis hypogaea HOM05D004535 ORTHO05D005341 1.5e-28 133.7 131 59.5
PSO541G1144 Papaver somniferum HOM05D004535 ORTHO05D005341 1.7e-24 120.2 76 72.4
arahy.Tifrunner.gnm1.ann1.6S2B7N Arachis hypogaea HOM05D012221 ORTHO05D005341 2.4e-23 116.3 121 56.2
Lsat_1_v5_gn_0_5420 Lactuca sativa HOM05D004535 ORTHO05D005341 9.3e-23 114.4 77 68.8
Psat5g106440 Pisum sativum HOM05D004535 ORTHO05D005341 1.6e-22 113.6 65 87.7
PGSC0003DMG402022150 Solanum tuberosum HOM05D004535 ORTHO05D005341 1.6e-22 113.6 96 55.2
arahy.Tifrunner.gnm1.ann1.QBA8JR Arachis hypogaea HOM05D004535 ORTHO05D005341 1.0e-21 110.9 163 45.4
arahy.Tifrunner.gnm1.ann1.EHT35G Arachis hypogaea HOM05D004535 ORTHO05D005341 1.1e-20 107.5 115 54.8
Ca_31034_v3 Cicer arietinum L. HOM05D004535 ORTHO05D005341 2.5e-20 106.3 77 74.0
VMungo1215G1327 Vigna mungo HOM05D004535 ORTHO05D005341 4.5e-17 95.5 72 69.4
CSS0045016 Camellia sinensis var. sinensis HOM05D000011 ORTHO05D000018 1.6e-14 87.0 72 65.3
SEGI_18126 Sequoiadendron giganteum HOM05D004535 ORTHO05D005341 2.1e-14 86.7 73 52.1
arahy.Tifrunner.gnm1.ann1.HQ6FCP Arachis hypogaea HOM05D004535 ORTHO05D005341 6.0e-14 85.1 170 39.4
VMungo0110G0001 Vigna mungo HOM05D004535 ORTHO05D005341 1.9e-12 80.1 63 55.6
Psat4g112520 Pisum sativum HOM05D004535 ORTHO05D005341 2.4e-07 63.2 45 62.2


User provided reference genes

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