Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv19519 Davidia involucrata HOM05D000005 ORTHO05D000012 4.2e-92 341.3 164 100.0
Dinv29648 Davidia involucrata HOM05D000005 ORTHO05D000012 1.7e-24 116.7 75 81.3
Dinv29640 Davidia involucrata HOM05D000005 ORTHO05D000012 5.8e-17 91.7 89 55.1
Dinv29646 Davidia involucrata HOM05D000005 ORTHO05D000012 3.8e-16 89.0 89 49.4
Dinv29687 Davidia involucrata HOM05D000005 ORTHO05D000012 3.5e-14 82.4 101 45.5
Dinv01685 Davidia involucrata HOM05D000005 ORTHO05D000012 6.0e-14 81.6 89 52.8
Dinv38462 Davidia involucrata HOM05D000005 ORTHO05D000012 3.9e-13 79.0 101 44.6
Dinv29649 Davidia involucrata HOM05D000005 ORTHO05D000012 1.5e-12 77.0 89 46.1
CSS0049718 Camellia sinensis var. sinensis HOM05D000005 ORTHO05D000012 3.3e-12 75.9 164 31.7
Dinv38457 Davidia involucrata HOM05D010983 ORTHO05D000012 3.3e-12 75.9 101 45.5
Dinv38459 Davidia involucrata HOM05D000005 ORTHO05D000012 3.3e-12 75.9 101 45.5
CSS0022340 Camellia sinensis var. sinensis HOM05D000005 ORTHO05D000012 3.6e-11 72.4 111 42.3
CSS0037441 Camellia sinensis var. sinensis HOM05D000005 ORTHO05D000012 6.2e-11 71.6 111 43.2
Dinv38450 Davidia involucrata HOM05D000005 ORTHO05D000012 1.4e-10 70.5 117 40.2
Dinv00400 Davidia involucrata HOM05D000005 ORTHO05D000012 2.4e-10 69.7 90 45.6
Lj3C725T19 Lonicera japonica HOM05D000005 ORTHO05D000012 2.4e-10 69.7 76 44.7
CSS0016030 Camellia sinensis var. sinensis HOM05D000005 ORTHO05D000012 3.1e-10 69.3 111 40.5
FAN06G4048 Fragaria x ananassa HOM05D000005 ORTHO05D000012 6.9e-10 68.2 106 39.6
FvH4_7g10510 Fragaria vesca HOM05D000005 ORTHO05D000012 9.0e-10 67.8 106 39.6
Dinv38460 Davidia involucrata HOM05D000005 ORTHO05D000012 1.2e-09 67.4 101 39.6
Dinv38455 Davidia involucrata HOM05D000005 ORTHO05D000012 1.5e-09 67.0 130 35.4
Dinv00401 Davidia involucrata HOM05D000005 ORTHO05D000012 3.4e-09 65.9 89 42.7
Dinv29690 Davidia involucrata HOM05D000005 ORTHO05D000012 3.4e-09 65.9 89 42.7
MD07G1079200 Malus domestica HOM05D000005 ORTHO05D000012 3.4e-09 65.9 66 48.5
CSS0031517 Camellia sinensis var. sinensis HOM05D000005 ORTHO05D000012 5.8e-09 65.1 113 44.2
FAN03G1873 Fragaria x ananassa HOM05D000005 ORTHO05D000012 7.6e-09 64.7 82 42.7
MD07G1079400 Malus domestica HOM05D000005 ORTHO05D000012 7.6e-09 64.7 57 50.9
FvH4_7g10750 Fragaria vesca HOM05D000005 ORTHO05D000012 9.9e-09 64.3 106 38.7
FAN06G2906 Fragaria x ananassa HOM05D000005 ORTHO05D000012 9.9e-09 64.3 106 38.7
FAN10G1850 Fragaria x ananassa HOM05D000005 ORTHO05D000012 9.9e-09 64.3 78 46.2
MD05G1140100 Malus domestica HOM05D000005 ORTHO05D000012 9.9e-09 64.3 86 39.5
Manes.06G012900 Manihot esculenta HOM05D000005 ORTHO05D000012 9.9e-09 64.3 94 41.5
Dinv38448 Davidia involucrata HOM05D000005 ORTHO05D000012 1.3e-08 63.9 54 59.3
MD02G1302100 Malus domestica HOM05D000005 ORTHO05D000012 1.3e-08 63.9 100 40.0
MD05G1152200 Malus domestica HOM05D000005 ORTHO05D000012 1.7e-08 63.5 107 40.2
CSS0040509 Camellia sinensis var. sinensis HOM05D000005 ORTHO05D000012 2.9e-08 62.8 77 44.2
FAN27G2507 Fragaria x ananassa HOM05D000005 ORTHO05D000012 2.9e-08 62.8 83 44.6
FAN01G0351 Fragaria x ananassa HOM05D000005 ORTHO05D000012 3.8e-08 62.4 79 44.3
Dinv38449 Davidia involucrata HOM05D000005 ORTHO05D000012 4.9e-08 62.0 179 29.6
vmacro01622 Vaccinium macrocarpon HOM05D000005 ORTHO05D000012 4.9e-08 62.0 86 44.2
DCAR_001436 Daucus carota HOM05D000005 ORTHO05D000012 6.4e-08 61.6 79 44.3
Dinv19518 Davidia involucrata HOM05D000005 ORTHO05D000012 6.4e-08 61.6 38 81.6
MD07G1102200 Malus domestica HOM05D000005 ORTHO05D000012 6.4e-08 61.6 100 37.0
RcHm_v2.0_Chr4g0405381 Rosa chinensis HOM05D000005 ORTHO05D000012 6.4e-08 61.6 87 39.1
CSS0009639 Camellia sinensis var. sinensis HOM05D000005 ORTHO05D000012 8.4e-08 61.2 81 44.4
MD07G1112300 Malus domestica HOM05D000005 ORTHO05D000012 8.4e-08 61.2 79 44.3
FAN10G1219 Fragaria x ananassa HOM05D000005 ORTHO05D000012 1.1e-07 60.8 79 43.0
Dinv38451 Davidia involucrata HOM05D000005 ORTHO05D000012 1.4e-07 60.5 54 55.6
FvH4_2g20310 Fragaria vesca HOM05D000005 ORTHO05D000012 1.4e-07 60.5 80 42.5
FAN24G1486 Fragaria x ananassa HOM05D000005 ORTHO05D000012 1.4e-07 60.5 80 42.5
Prupe.8G185300 Prunus persica HOM05D000005 ORTHO05D000012 1.4e-07 60.5 56 55.4
Prupe.2G101900 Prunus persica HOM05D000005 ORTHO05D000012 1.9e-07 60.1 64 45.3
RcHm_v2.0_Chr1g0348371 Rosa chinensis HOM05D000005 ORTHO05D000012 1.9e-07 60.1 105 35.2
Hma1.2p1_0188F.1_g082485 Hydrangea macrophylla HOM05D000005 ORTHO05D000012 2.4e-07 59.7 58 46.6
Potri.007G099700 Populus trichocarpa HOM05D000005 ORTHO05D000012 2.4e-07 59.7 74 44.6
DCAR_002255 Daucus carota HOM05D000005 ORTHO05D000012 3.2e-07 59.3 88 40.9
MD07G1103200 Malus domestica HOM05D000005 ORTHO05D000012 3.2e-07 59.3 95 36.8
MD08G1019200 Malus domestica HOM05D000005 ORTHO05D000012 4.2e-07 58.9 92 42.4
MD15G1416500 Malus domestica HOM05D000005 ORTHO05D000012 4.2e-07 58.9 87 39.1
Prupe.3G010100 Prunus persica HOM05D000005 ORTHO05D000012 4.2e-07 58.9 64 43.8
Dinv29645 Davidia involucrata HOM05D000005 ORTHO05D000012 7.1e-07 58.2 68 45.6
Dinv38461 Davidia involucrata HOM05D000005 ORTHO05D000012 7.1e-07 58.2 68 42.6
MD08G1019400 Malus domestica HOM05D000005 ORTHO05D000012 7.1e-07 58.2 92 43.5
Prupe.2G126800 Prunus persica HOM05D000005 ORTHO05D000012 9.3e-07 57.8 106 38.7
Lsat_1_v5_gn_8_112140 Lactuca sativa HOM05D000005 ORTHO05D000012 1.2e-06 57.4 70 44.3
DCAR_004352 Daucus carota HOM05D000005 ORTHO05D000012 1.6e-06 57.0 54 51.9
FvH4_7g10520 Fragaria vesca HOM05D000005 ORTHO05D000012 1.6e-06 57.0 89 38.2
FAN03G2198 Fragaria x ananassa HOM05D000005 ORTHO05D000012 1.6e-06 57.0 104 37.5
MD04G1010700 Malus domestica HOM05D000005 ORTHO05D000012 2.1e-06 56.6 100 36.0
MD15G1375200 Malus domestica HOM05D000005 ORTHO05D000012 2.1e-06 56.6 63 46.0
Prupe.2G126700 Prunus persica HOM05D000005 ORTHO05D000012 2.1e-06 56.6 95 37.9
RcHm_v2.0_Chr1g0348311 Rosa chinensis HOM05D000005 ORTHO05D000012 2.1e-06 56.6 53 49.1
RcHm_v2.0_Chr1g0348361 Rosa chinensis HOM05D000005 ORTHO05D000012 2.1e-06 56.6 53 49.1
Prupe.3G009700 Prunus persica HOM05D000005 ORTHO05D000012 2.7e-06 56.2 68 38.2
Sc03g0008120 Simmondsia chinensis HOM05D000005 ORTHO05D000012 2.7e-06 56.2 110 34.5
Sopen11g008710 Solanum pennellii HOM05D000005 ORTHO05D000012 2.7e-06 56.2 80 40.0
MD08G1020800 Malus domestica HOM05D000005 ORTHO05D000012 3.5e-06 55.8 92 40.2
Solyc11g013750.3 Solanum lycopersicum HOM05D000005 ORTHO05D000012 3.5e-06 55.8 80 40.0
PGSC0003DMG400013098 Solanum tuberosum HOM05D000005 ORTHO05D000012 3.5e-06 55.8 81 43.2
Prupe.4G260900 Prunus persica HOM05D000005 ORTHO05D000012 4.6e-06 55.5 78 41.0
CSS0034467 Camellia sinensis var. sinensis HOM05D000005 ORTHO05D000012 6.0e-06 55.1 65 47.7
Dinv38452 Davidia involucrata HOM05D000005 ORTHO05D000012 6.0e-06 55.1 99 37.4
Prupe.2G126400 Prunus persica HOM05D000005 ORTHO05D000012 6.0e-06 55.1 100 37.0
MD08G1020200 Malus domestica HOM05D000005 ORTHO05D000012 7.8e-06 54.7 64 48.4
Prupe.8G185200 Prunus persica HOM05D000005 ORTHO05D000012 7.8e-06 54.7 129 30.2
Sopen01g045300 Solanum pennellii HOM05D000005 ORTHO05D000012 7.8e-06 54.7 82 42.7


User provided reference genes

Program Settings