Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv19218 Davidia involucrata HOM05D000347 ORTHO05D008062 4.3e-153 544.7 279 100.0
GSVIVG01028561001 Vitis vinifera HOM05D000347 ORTHO05D008062 2.1e-75 286.6 262 63.4
Cc01_g17250 Coffea canephora HOM05D000347 ORTHO05D008062 3.6e-75 285.8 294 59.2
Thecc.01G228300 Theobroma cacao HOM05D000347 ORTHO05D008062 2.6e-73 279.6 288 57.3
CiPaw.04G106800 Carya illinoinensis HOM05D000347 ORTHO05D000694 4.8e-72 275.4 283 58.7
Hma1.2p1_0351F.1_g132820 Hydrangea macrophylla HOM05D000347 ORTHO05D008062 4.8e-72 275.4 278 58.6
MD05G1178500 Malus domestica HOM05D000347 ORTHO05D008062 5.9e-70 268.5 290 55.2
MD10G1166700 Malus domestica HOM05D000347 ORTHO05D008062 2.2e-69 266.5 289 54.0
Manes.12G042000 Manihot esculenta HOM05D000347 ORTHO05D008062 2.2e-69 266.5 289 53.6
Prupe.8G205000 Prunus persica HOM05D000347 ORTHO05D000694 1.4e-68 263.8 280 57.1
RcHm_v2.0_Chr6g0285151 Rosa chinensis HOM05D000347 ORTHO05D008062 1.4e-68 263.8 290 55.5
Phvul.008G123300 Phaseolus vulgaris HOM05D000347 ORTHO05D008062 1.2e-67 260.8 289 55.7
Potri.002G240300 Populus trichocarpa HOM05D000347 ORTHO05D008062 2.7e-67 259.6 288 54.2
Eucgr.H00807 Eucalyptus grandis HOM05D000347 ORTHO05D008062 6.1e-67 258.5 287 54.0
FvH4_2g19360 Fragaria vesca HOM05D000347 ORTHO05D008062 2.3e-66 256.5 290 54.8
FAN15G1475 Fragaria x ananassa HOM05D000347 ORTHO05D000694 3.0e-66 256.1 289 54.0
Migut.D00520 Erythranthe guttata HOM05D000347 ORTHO05D008062 8.8e-66 254.6 297 54.5
FAN27G2014 Fragaria x ananassa HOM05D000347 ORTHO05D008062 8.8e-66 254.6 282 53.5
MSTRG.21431 Avicennia marina HOM05D000347 ORTHO05D008062 2.0e-65 253.4 282 53.9
Glyma.18G173300 Glycine max HOM05D000347 ORTHO05D008062 1.8e-63 246.9 289 52.9
Glyma.08G356200 Glycine max HOM05D000347 ORTHO05D008062 3.1e-63 246.1 289 53.3
TAR636G2566 Trochodendron aralioides HOM05D000347 ORTHO05D008062 1.2e-62 244.2 300 51.7
VMungo1383G0854 Vigna mungo HOM05D000347 ORTHO05D008062 1.9e-60 236.9 287 52.3
Lj1g0023077 Lotus japonicus HOM05D000347 ORTHO05D008062 5.5e-60 235.3 284 51.8
FAN24G2098 Fragaria x ananassa HOM05D000347 ORTHO05D000694 1.2e-59 234.2 285 52.3
TAR365G0021 Trochodendron aralioides HOM05D000347 ORTHO05D008062 8.0e-59 231.5 297 47.5
CSS0034279 Camellia sinensis var. sinensis HOM05D000347 ORTHO05D008062 1.5e-57 227.3 183 68.3
Gohir.D11G142500 Gossypium hirsutum HOM05D000347 ORTHO05D008062 1.3e-56 224.2 291 49.8
Actinidia23733 Actinidia chinensis HOM05D000347 ORTHO05D008062 1.7e-56 223.8 283 50.9
Gorai.007G152800 Gossypium raimondii HOM05D000347 ORTHO05D008062 2.2e-56 223.4 290 49.7
TWI18G0408 Tripterygium wilfordii HOM05D000347 ORTHO05D008062 3.7e-56 222.6 344 45.6
PGR083G0949 Punica granatum HOM05D000347 ORTHO05D008062 4.8e-56 222.2 287 50.5
Gohir.A11G136100 Gossypium hirsutum HOM05D000347 ORTHO05D008062 6.3e-56 221.9 291 49.1
TAR365G1261 Trochodendron aralioides HOM05D000347 ORTHO05D008062 3.1e-55 219.5 310 45.8
Sopen06g034940 Solanum pennellii HOM05D000347 ORTHO05D008062 1.3e-53 214.2 283 46.6
Ciclev10021356m.g Citrus clementina HOM05D000347 ORTHO05D008062 1.7e-53 213.8 303 48.5
Actinidia37581 Actinidia chinensis HOM05D000347 ORTHO05D008062 3.8e-53 212.6 179 65.9
TPR.G15284 Trifolium pratense HOM05D000347 ORTHO05D008062 8.5e-53 211.5 285 50.2
Medtr0027s0180 Medicago truncatula HOM05D000347 ORTHO05D008062 2.5e-52 209.9 264 52.3
Nn1g07779 Nelumbo nucifera HOM05D000347 ORTHO05D008062 7.2e-52 208.4 299 45.5
QL09p044668 Quercus lobata HOM05D000347 ORTHO05D008062 7.2e-52 208.4 184 64.1
Sabra02G0183100 Salix brachista HOM05D000347 ORTHO05D008062 7.2e-52 208.4 256 50.8
SGA_v2.0_scaffold1G00715 Striga asiatica HOM05D000347 ORTHO05D008062 7.2e-52 208.4 285 48.4
Nitab4.5_0000866g0010 Nicotiana tabacum HOM05D000347 ORTHO05D008062 1.6e-51 207.2 285 50.9
CsaV3_3G028770 Cucumis sativus L. HOM05D000347 ORTHO05D008062 2.3e-50 203.4 286 47.2
PGSC0003DMG400020089 Solanum tuberosum HOM05D007853 ORTHO05D009873 5.2e-50 202.2 279 46.6
Solyc06g083560.3 Solanum lycopersicum HOM05D000347 ORTHO05D008062 2.0e-49 200.3 285 45.3
Lalb_Chr01g0022451 Lupinus albus HOM05D000347 ORTHO05D008062 3.4e-49 199.5 282 47.2
Actinidia30090 Actinidia chinensis HOM05D000347 ORTHO05D008062 2.2e-48 196.8 179 64.2
CiPaw.03G151400 Carya illinoinensis HOM05D000347 ORTHO05D008062 1.4e-47 194.1 182 62.1
Haze_24776 Corylus avellana HOM05D000347 ORTHO05D008062 4.1e-47 192.6 203 55.2
Sed0024927 Sechium edule HOM05D000901 ORTHO05D008062 5.4e-47 192.2 288 46.2
Psat3g142320 Pisum sativum HOM05D000347 ORTHO05D008062 2.7e-46 189.9 286 47.9
Glyma.16G094000 Glycine max HOM05D000347 ORTHO05D008062 3.5e-46 189.5 281 42.7
Cpa.g.sc8.175 Carica papaya HOM05D000347 ORTHO05D008062 1.0e-45 188.0 301 45.5
Solyc09g061715.1 Solanum lycopersicum HOM05D000347 ORTHO05D008062 1.7e-45 187.2 286 46.2
Sopen09g024710 Solanum pennellii HOM05D000347 ORTHO05D008062 1.7e-45 187.2 286 46.2
ClCG07G001810 Citrullus lanatus HOM05D006129 ORTHO05D007446 2.5e-44 183.3 282 45.4
Oeu018505.1 Olea europaea HOM05D000879 ORTHO05D002043 2.8e-43 179.9 177 57.6
CANSAT01G0926 Cannabis sativa HOM05D000347 ORTHO05D008062 2.6e-41 173.3 311 41.8
arahy.Tifrunner.gnm1.ann1.W0YDFD Arachis hypogaea HOM05D000347 ORTHO05D008062 7.5e-41 171.8 297 42.1
Rhsim13G0044000 Rhododendron simsii HOM05D000347 ORTHO05D008062 2.8e-40 169.9 178 58.4
Lalb_Chr03g0041901 Lupinus albus HOM05D000347 ORTHO05D008062 1.8e-39 167.2 257 46.7
Ca_07542_v3 Cicer arietinum L. HOM05D000347 ORTHO05D008062 5.4e-39 165.6 185 53.0
Gohir.D08G211800 Gossypium hirsutum HOM05D000347 ORTHO05D008062 4.5e-38 162.5 300 41.3
Aqoxy2G03776 Aquilegia oxysepala HOM05D000347 ORTHO05D008062 1.0e-37 161.4 297 41.8
Gohir.A08G194000 Gossypium hirsutum HOM05D000347 ORTHO05D008062 2.3e-37 160.2 300 40.0
Gorai.004G225100 Gossypium raimondii HOM05D000347 ORTHO05D008062 2.9e-37 159.8 299 40.8
Medtr7g059080 Medicago truncatula HOM05D000347 ORTHO05D008062 3.8e-37 159.5 158 59.5
SalBow4G1846 Salvia bowleyana HOM05D000347 ORTHO05D008062 8.6e-37 158.3 173 56.1
Sed0024241 Sechium edule HOM05D000347 ORTHO05D008062 1.1e-36 157.9 281 42.0
HanXRQChr01g0014681 Helianthus annuus HOM05D000347 ORTHO05D008062 2.5e-36 156.8 184 51.6
MELO3C018065.2 Cucumis melo HOM05D000347 ORTHO05D008062 5.6e-36 155.6 189 51.3
vmacro02746 Vaccinium macrocarpon HOM05D000347 ORTHO05D008062 5.6e-36 155.6 179 57.5
Peaxi162Scf02141g00004 Petunia axillaris HOM05D000347 ORTHO05D008062 2.8e-35 153.3 188 50.0
arahy.Tifrunner.gnm1.ann1.54FW37 Arachis hypogaea HOM05D000347 ORTHO05D008062 2.6e-33 146.7 276 41.7
Peaxi162Scf00517g00428 Petunia axillaris HOM05D000347 ORTHO05D008062 1.1e-31 141.4 246 39.8
PGSC0003DMG400003422 Solanum tuberosum HOM05D000347 ORTHO05D008062 3.2e-31 139.8 179 49.2
Ah.08g214040 Amaranthus hybridus HOM05D000901 ORTHO05D008062 1.6e-30 137.5 262 38.9
Lsat_1_v5_gn_5_179760 Lactuca sativa HOM05D000347 ORTHO05D008062 2.0e-30 137.1 194 50.0
Phvul.010G019300 Phaseolus vulgaris HOM05D000347 ORTHO05D008062 2.7e-30 136.7 277 37.9
Sc05g0002410 Simmondsia chinensis HOM05D000347 ORTHO05D008062 3.9e-29 132.9 296 36.5
Nitab4.5_0002085g0080 Nicotiana tabacum HOM05D000347 ORTHO05D008062 1.9e-28 130.6 244 39.3
VMungo0331G1006 Vigna mungo HOM05D000347 ORTHO05D008062 2.5e-28 130.2 280 36.8
Nn3g19918 Nelumbo nucifera HOM05D000347 ORTHO05D008062 5.6e-28 129.0 195 44.1
Carub.0003s2514 Capsella rubella HOM05D011699 ORTHO05D008062 2.3e-26 123.6 291 36.8
Nitab4.5_0003790g0070 Nicotiana tabacum HOM05D000347 ORTHO05D008062 5.2e-26 122.5 114 64.0
Medtr0027s0200 Medicago truncatula HOM05D000347 ORTHO05D008062 8.9e-26 121.7 215 42.8
DCAR_018551 Daucus carota HOM05D000347 ORTHO05D008062 2.0e-25 120.6 282 36.9
Lj3g0009150 Lotus japonicus HOM05D000347 ORTHO05D008062 2.0e-25 120.6 283 37.8
Atru.chr5.2056 Acer truncatum HOM05D000347 ORTHO05D008062 7.5e-25 118.6 112 57.1
AUR62031831 Chenopodium quinoa HOM05D000347 ORTHO05D008062 1.1e-23 114.8 194 42.8
AL3G40480 Arabidopsis lyrata HOM05D011699 ORTHO05D008062 3.2e-23 113.2 286 34.6
DCAR_004713 Daucus carota HOM05D000347 ORTHO05D008062 3.9e-21 106.3 183 43.2
BcaB06g26692 Brassica carinata HOM05D011699 ORTHO05D008062 5.0e-21 105.9 280 31.4
Phvul.010G019000 Phaseolus vulgaris HOM05D000347 ORTHO05D008062 8.6e-21 105.1 213 39.9
BcaC06g35749 Brassica carinata HOM05D011699 ORTHO05D008062 1.1e-20 104.8 281 32.4
A07p07520 Brassica napus HOM05D011699 ORTHO05D008062 1.1e-20 104.8 279 32.6
BraA07t28543Z Brassica rapa HOM05D011699 ORTHO05D008062 1.1e-20 104.8 279 32.6
MBI07_g21075_MAGBIO Magnolia biondii HOM05D000347 ORTHO05D008062 1.1e-20 104.8 193 45.1
C07p11290 Brassica napus HOM05D011699 ORTHO05D008062 9.5e-20 101.7 285 31.6
BolC7t41607H Brassica oleracea HOM05D011699 ORTHO05D008062 2.8e-19 100.1 280 31.8
AT3G24750 Arabidopsis thaliana HOM05D011699 ORTHO05D008062 6.2e-19 99.0 286 32.2
AUR62008877 Chenopodium quinoa HOM05D000347 ORTHO05D008062 3.1e-18 96.7 127 43.3
Sp3g22490 Schrenkiella parvula HOM05D011699 ORTHO05D008062 1.3e-16 91.3 285 30.2
SalBow2G2623 Salvia bowleyana HOM05D000347 ORTHO05D008062 8.3e-16 88.6 287 32.1
Sc24g0003600 Simmondsia chinensis HOM05D000347 ORTHO05D008062 1.1e-15 88.2 162 38.9
Thhalv10002691m.g Eutrema salsugineum HOM05D011699 ORTHO05D008062 3.2e-15 86.7 137 43.8
THA.LOC104821644 Tarenaya hassleriana HOM05D000347 ORTHO05D008062 3.5e-14 83.2 166 39.8
PSO017G1362 Papaver somniferum HOM05D000347 ORTHO05D008062 7.8e-14 82.0 234 36.8
EL10Ac7g17790 Beta vulgaris HOM05D000347 ORTHO05D008062 3.0e-13 80.1 234 30.3
SGA_v2.0_scaffold8G04652 Striga asiatica HOM05D005470 ORTHO05D006855 3.9e-13 79.7 131 44.3
CARHR101080 Cardamine hirsuta HOM05D011699 ORTHO05D008062 2.5e-12 77.0 294 31.3
Oeu058867.1 Olea europaea HOM05D000347 ORTHO05D008062 3.3e-12 76.6 82 53.7
THA.LOC104804603 Tarenaya hassleriana HOM05D000347 ORTHO05D008062 4.3e-12 76.3 288 28.1
PSO063G6109 Papaver somniferum HOM05D000347 ORTHO05D008062 1.6e-11 74.3 234 34.6
unitig_8.g3754 Utricularia gibba HOM05D004922 ORTHO05D005990 2.0e-09 67.4 233 30.0
ECA248G1409 Erigeron canadensis HOM05D000102 ORTHO05D000138 4.4e-09 66.2 74 48.6
HPP92_009010 Vanilla planifolia HOM05D000347 ORTHO05D008062 3.5e-06 56.6 124 35.5
Zm00001eb379630 Zea mays HOM05D042818 ORTHO05D008062 4.6e-06 56.2 165 32.7


User provided reference genes

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