Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv19192 Davidia involucrata HOM05D001567 ORTHO05D001409 9.4e-122 440.3 233 100.0
Dinv12677 Davidia involucrata HOM05D001567 ORTHO05D001409 3.5e-52 209.1 186 65.1
Actinidia23720 Actinidia chinensis HOM05D001567 ORTHO05D001409 3.8e-38 162.5 197 54.3
CSS0005639 Camellia sinensis var. sinensis HOM05D001567 ORTHO05D001409 2.5e-37 159.8 196 55.6
Actinidia37602 Actinidia chinensis HOM05D001567 ORTHO05D001409 2.1e-36 156.8 174 55.7
Hma1.2p1_0226F.1_g095540 Hydrangea macrophylla HOM05D001567 ORTHO05D001409 2.3e-35 153.3 196 56.1
Actinidia09478 Actinidia chinensis HOM05D001567 ORTHO05D001409 1.9e-34 150.2 224 51.8
Hma1.2p1_0551F.1_g177530 Hydrangea macrophylla HOM05D001567 ORTHO05D001409 6.3e-33 145.2 186 53.2
Rhsim01G0255300 Rhododendron simsii HOM05D001567 ORTHO05D001409 5.5e-29 132.1 232 43.5
vmacro14748 Vaccinium macrocarpon HOM05D001567 ORTHO05D001409 7.2e-29 131.7 220 47.3
GSVIVG01003308001 Vitis vinifera HOM05D001567 ORTHO05D001409 2.8e-25 119.8 144 50.0
TWI36G1781 Tripterygium wilfordii HOM05D001567 ORTHO05D001409 7.7e-23 111.7 116 55.2
TWI18G0295 Tripterygium wilfordii HOM05D001567 ORTHO05D001409 2.2e-22 110.2 159 47.2
Lj1C87T6 Lonicera japonica HOM05D001567 ORTHO05D001409 1.2e-20 104.4 146 47.3
Eucgr.K02149 Eucalyptus grandis HOM05D001567 ORTHO05D001409 3.6e-20 102.8 188 40.4
PGR083G0087 Punica granatum HOM05D001567 ORTHO05D001409 3.6e-20 102.8 176 38.6
TAR365G1192 Trochodendron aralioides HOM05D001567 ORTHO05D001409 8.0e-20 101.7 105 55.2
COL.COLO4_15668 Corchorus olitorius HOM05D001567 ORTHO05D001409 1.1e-18 97.8 110 54.5
Manes.12G045900 Manihot esculenta HOM05D001567 ORTHO05D001409 3.3e-18 96.3 130 44.6
Sabra02G0185500 Salix brachista HOM05D001567 ORTHO05D001409 5.7e-18 95.5 113 48.7
Duzib138G0369 Durio zibethinus HOM05D001567 ORTHO05D001409 9.7e-18 94.7 139 46.0
Cc01_g16900 Coffea canephora HOM05D001567 ORTHO05D001409 1.3e-17 94.4 190 37.4
Migut.D02492 Erythranthe guttata HOM05D001567 ORTHO05D001409 1.7e-17 94.0 166 42.2
Potri.002G243800 Populus trichocarpa HOM05D001567 ORTHO05D001409 1.7e-17 94.0 113 47.8
Medtr3g065180 Medicago truncatula HOM05D001567 ORTHO05D001409 6.3e-17 92.0 183 37.7
Peaxi162Scf00594g00034 Petunia axillaris HOM05D001567 ORTHO05D001409 6.3e-17 92.0 130 44.6
Glyma.08G350900 Glycine max HOM05D001567 ORTHO05D001409 8.2e-17 91.7 115 46.1
Sabra19G0074500 Salix brachista HOM05D001567 ORTHO05D001409 8.2e-17 91.7 113 46.0
Ca_17418_v3 Cicer arietinum L. HOM05D001567 ORTHO05D001409 1.1e-16 91.3 176 38.6
Glyma.18G165000 Glycine max HOM05D001567 ORTHO05D001409 1.8e-16 90.5 117 47.0
Psat5g120240 Pisum sativum HOM05D001567 ORTHO05D001409 1.8e-16 90.5 111 47.7
Duzib133G0221 Durio zibethinus HOM05D001567 ORTHO05D001409 2.4e-16 90.1 139 43.9
Manes.13G047000 Manihot esculenta HOM05D001567 ORTHO05D001409 2.4e-16 90.1 138 41.3
Phvul.008G128400 Phaseolus vulgaris HOM05D001567 ORTHO05D001409 2.4e-16 90.1 115 47.0
Medtr7g056407 Medicago truncatula HOM05D001567 ORTHO05D001409 3.1e-16 89.7 180 37.2
VMungo1383G0185 Vigna mungo HOM05D001567 ORTHO05D001409 4.1e-16 89.4 181 37.0
Cpa.g.sc8.141 Carica papaya HOM05D001567 ORTHO05D001409 7.0e-16 88.6 152 42.8
Haze_24814 Corylus avellana HOM05D001567 ORTHO05D001409 2.0e-15 87.0 152 43.4
QL09p053337 Quercus lobata HOM05D001567 ORTHO05D001409 2.0e-15 87.0 114 50.0
TAR362G0559 Trochodendron aralioides HOM05D001567 ORTHO05D001409 2.0e-15 87.0 153 39.9
Eucgr.H00794 Eucalyptus grandis HOM05D001567 ORTHO05D001409 4.5e-15 85.9 185 37.8
Cfa002580 Carpinus fangiana HOM05D001567 ORTHO05D001409 7.7e-15 85.1 163 41.1
Aqoxy2G03841 Aquilegia oxysepala HOM05D001567 ORTHO05D001409 1.0e-14 84.7 189 35.4
Lj1g0000938 Lotus japonicus HOM05D001567 ORTHO05D001409 1.0e-14 84.7 165 38.2
Atru.chr5.1133 Acer truncatum HOM05D001567 ORTHO05D001409 1.3e-14 84.3 138 43.5
MELO3C027000.2 Cucumis melo HOM05D001567 ORTHO05D001409 1.7e-14 84.0 111 48.6
Ciclev10020442m.g Citrus clementina HOM05D001567 ORTHO05D001409 2.2e-14 83.6 174 40.2
Gohir.D07G207000 Gossypium hirsutum HOM05D001567 ORTHO05D001409 2.2e-14 83.6 119 48.7
Psat3g147400 Pisum sativum HOM05D001567 ORTHO05D001409 2.2e-14 83.6 141 41.1
Gorai.001G233400 Gossypium raimondii HOM05D001567 ORTHO05D001409 3.8e-14 82.8 155 41.9
CsaV3_3G029950 Cucumis sativus L. HOM05D001567 ORTHO05D001409 5.0e-14 82.4 186 36.6
Nitab4.5_0000345g0110 Nicotiana tabacum HOM05D001567 ORTHO05D001409 6.5e-14 82.0 149 37.6
Sed0007482 Sechium edule HOM05D001567 ORTHO05D001409 8.5e-14 81.6 178 37.1
TPR.G24895 Trifolium pratense HOM05D001567 ORTHO05D001409 8.5e-14 81.6 148 36.5
Gohir.A07G200700 Gossypium hirsutum HOM05D001567 ORTHO05D001409 1.5e-13 80.9 163 40.5
ECA248G1136 Erigeron canadensis HOM05D000027 ORTHO05D001163 1.9e-13 80.5 120 38.3
Migut.N00622 Erythranthe guttata HOM05D001567 ORTHO05D001409 1.9e-13 80.5 123 39.8
Gohir.D11G145000 Gossypium hirsutum HOM05D001567 ORTHO05D001409 1.9e-13 80.5 137 40.9
Thecc.01G224200 Theobroma cacao HOM05D001567 ORTHO05D001409 1.9e-13 80.5 235 34.5
ClCG07G001980 Citrullus lanatus HOM05D001567 ORTHO05D001409 2.5e-13 80.1 126 42.9
Gohir.A11G138800 Gossypium hirsutum HOM05D001567 ORTHO05D001409 4.2e-13 79.3 137 40.9
Gorai.007G155500 Gossypium raimondii HOM05D001567 ORTHO05D001409 4.2e-13 79.3 137 40.1
Nitab4.5_0000045g0360 Nicotiana tabacum HOM05D001567 ORTHO05D001409 4.2e-13 79.3 199 34.7
Lalb_Chr19g0125691 Lupinus albus HOM05D001567 ORTHO05D001409 5.5e-13 79.0 170 35.9
Oeu018494.1 Olea europaea HOM05D001567 ORTHO05D001409 7.2e-13 78.6 227 34.4
PGR044G0977 Punica granatum HOM05D001567 ORTHO05D001409 7.2e-13 78.6 188 35.6
SHI33581 Sapria himalayana HOM05D001567 ORTHO05D001409 9.4e-13 78.2 145 38.6
Duzib211G0659 Durio zibethinus HOM05D001567 ORTHO05D001409 2.7e-12 76.6 168 36.9
Lsat_1_v5_gn_5_180460 Lactuca sativa HOM05D001567 ORTHO05D001409 3.6e-12 76.3 83 48.2
Gohir.A07G157300 Gossypium hirsutum HOM05D001567 ORTHO05D001409 6.1e-12 75.5 126 38.9
MD10G1163000 Malus domestica HOM05D001567 ORTHO05D001409 6.1e-12 75.5 141 39.0
Gohir.A08G195100 Gossypium hirsutum HOM05D001567 ORTHO05D001409 2.3e-11 73.6 76 47.4
arahy.Tifrunner.gnm1.ann1.XY7U51 Arachis hypogaea HOM05D001567 ORTHO05D001409 6.7e-11 72.0 172 37.8
CiPaw.04G104800 Carya illinoinensis HOM05D001567 ORTHO05D001409 6.7e-11 72.0 166 37.3
HanXRQChr15g0468711 Helianthus annuus HOM05D001567 ORTHO05D001409 6.7e-11 72.0 90 43.3
THA.LOC104822500 Tarenaya hassleriana HOM05D001567 ORTHO05D001409 6.7e-11 72.0 132 37.1
HanXRQChr01g0015191 Helianthus annuus HOM05D001567 ORTHO05D001409 1.2e-10 71.2 90 41.1
arahy.Tifrunner.gnm1.ann1.303SZX Arachis hypogaea HOM05D001567 ORTHO05D001409 2.0e-10 70.5 179 37.4
MD05G1174100 Malus domestica HOM05D001567 ORTHO05D001409 2.0e-10 70.5 78 44.9
CANSAT01G0377 Cannabis sativa HOM05D001567 ORTHO05D001409 3.3e-10 69.7 184 38.0
SGA_v2.0_scaffold6G03233 Striga asiatica HOM05D001567 ORTHO05D001409 3.3e-10 69.7 83 47.0
Lalb_Chr03g0041691 Lupinus albus HOM05D001567 ORTHO05D001409 5.7e-10 68.9 121 38.0
Gohir.D08G212614 Gossypium hirsutum HOM05D001567 ORTHO05D001409 7.5e-10 68.6 107 40.2
Gorai.004G226100 Gossypium raimondii HOM05D001567 ORTHO05D001409 7.5e-10 68.6 107 40.2
Prupe.8G201500 Prunus persica HOM05D001567 ORTHO05D001409 7.5e-10 68.6 182 34.6
THA.LOC104818961 Tarenaya hassleriana HOM05D001567 ORTHO05D001409 7.5e-10 68.6 106 41.5
Gohir.D07G163600 Gossypium hirsutum HOM05D001567 ORTHO05D001409 1.7e-09 67.4 122 38.5
Gorai.001G187400 Gossypium raimondii HOM05D001567 ORTHO05D001409 1.7e-09 67.4 122 38.5
Aa31LG5G17680 Aethionema arabicum HOM05D001567 ORTHO05D001409 2.8e-09 66.6 122 38.5
PGSC0003DMG400030177 Solanum tuberosum HOM05D001567 ORTHO05D001409 3.7e-09 66.2 83 45.8
unitig_699.g19242 Utricularia gibba HOM05D001567 ORTHO05D001409 6.3e-09 65.5 103 40.8
ECA247G1755 Erigeron canadensis HOM05D001567 ORTHO05D001409 8.2e-09 65.1 139 33.8
FvH4_2g18810 Fragaria vesca HOM05D001567 ORTHO05D001409 1.4e-08 64.3 96 39.6
Sp3g06060 Schrenkiella parvula HOM05D001567 ORTHO05D001409 1.4e-08 64.3 109 37.6
DCAR_012653 Daucus carota HOM05D001567 ORTHO05D001409 1.8e-08 63.9 141 31.2
FAN24G3558 Fragaria x ananassa HOM05D001567 ORTHO05D001409 1.8e-08 63.9 96 39.6
FAN27G2175 Fragaria x ananassa HOM05D001567 ORTHO05D001409 1.8e-08 63.9 96 39.6
THA.LOC104808795 Tarenaya hassleriana HOM05D001567 ORTHO05D001409 1.8e-08 63.9 99 39.4
BcaB04g21313 Brassica carinata HOM05D001567 ORTHO05D001409 3.1e-08 63.2 80 43.8
A03p35090 Brassica napus HOM05D001567 ORTHO05D001409 3.1e-08 63.2 94 39.4
BraA03t12688Z Brassica rapa HOM05D001567 ORTHO05D001409 3.1e-08 63.2 94 39.4
PSO063G1907 Papaver somniferum HOM05D001567 ORTHO05D001409 4.1e-08 62.8 124 39.5
TWI75G1482 Tripterygium wilfordii HOM05D001567 ORTHO05D001409 4.1e-08 62.8 189 34.9
A07p07320 Brassica napus HOM05D001567 ORTHO05D001409 7.0e-08 62.0 171 31.6
BraA07t28521Z Brassica rapa HOM05D001567 ORTHO05D001409 7.0e-08 62.0 171 31.6
CARHR101310 Cardamine hirsuta HOM05D001567 ORTHO05D001409 7.0e-08 62.0 124 33.9
FAN15G0104 Fragaria x ananassa HOM05D001567 ORTHO05D001409 7.0e-08 62.0 96 38.5
Lj3g0020669 Lotus japonicus HOM05D001567 ORTHO05D001409 7.0e-08 62.0 97 40.2
Sopen09g023160 Solanum pennellii HOM05D001567 ORTHO05D001409 7.0e-08 62.0 84 44.0
Lsat_1_v5_gn_9_12420 Lactuca sativa HOM05D001567 ORTHO05D001409 9.1e-08 61.6 159 29.6
Thhalv10021010m.g Eutrema salsugineum HOM05D001567 ORTHO05D001409 2.7e-07 60.1 124 34.7
RcHm_v2.0_Chr6g0284561 Rosa chinensis HOM05D001567 ORTHO05D001409 2.7e-07 60.1 158 31.0
AL3G18370 Arabidopsis lyrata HOM05D001567 ORTHO05D001409 3.5e-07 59.7 126 34.1
AUR62001100 Chenopodium quinoa HOM05D038301 ORTHO05D031665 3.5e-07 59.7 122 35.2
Solyc09g059990.1 Solanum lycopersicum HOM05D001567 ORTHO05D001409 3.5e-07 59.7 83 42.2
AT3G07120 Arabidopsis thaliana HOM05D001567 ORTHO05D001409 5.9e-07 58.9 126 34.1
Carub.0003s0664 Capsella rubella HOM05D001567 ORTHO05D001409 1.0e-06 58.2 187 29.9
CARHR081720 Cardamine hirsuta HOM05D001567 ORTHO05D001409 1.0e-06 58.2 163 31.9
PSO017G4857 Papaver somniferum HOM05D001567 ORTHO05D001409 1.0e-06 58.2 124 37.9
SGA_v2.0_scaffold6G03490 Striga asiatica HOM05D001567 ORTHO05D001409 1.0e-06 58.2 226 30.1
AUR62008925 Chenopodium quinoa HOM05D038301 ORTHO05D031665 1.7e-06 57.4 179 33.0
BcaC09g47941 Brassica carinata HOM05D001567 ORTHO05D001409 3.8e-06 56.2 53 47.2
BolC1t05568H Brassica oleracea HOM05D001567 ORTHO05D001409 3.8e-06 56.2 53 47.2
Sp3g22610 Schrenkiella parvula HOM05D001567 ORTHO05D001409 5.0e-06 55.8 165 30.9
SpUN0027_0090 Schrenkiella parvula HOM05D001567 ORTHO05D001409 5.0e-06 55.8 165 30.9
BcaC06g35767 Brassica carinata HOM05D001567 ORTHO05D001409 6.5e-06 55.5 171 28.1
PSO017G6464 Papaver somniferum HOM05D001567 ORTHO05D001409 6.5e-06 55.5 98 34.7
BNapus_Darmor_BZH_scaffold_109p00230 Brassica napus HOM05D001567 ORTHO05D001409 8.5e-06 55.1 53 45.3
BraA01t04396Z Brassica rapa HOM05D001567 ORTHO05D001409 8.5e-06 55.1 53 45.3


User provided reference genes

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