Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv19184 Davidia involucrata HOM05D005553 ORTHO05D006866 4.6e-266 920.6 452 100.0
Dinv12662 Davidia involucrata HOM05D005553 ORTHO05D006866 2.6e-208 728.8 442 82.1
CSS0002030 Camellia sinensis var. sinensis HOM05D005553 ORTHO05D006866 1.0e-180 637.1 443 72.0
Lj2A1127T50 Lonicera japonica HOM05D005553 ORTHO05D006866 1.7e-172 609.8 444 68.0
vmacro14742 Vaccinium macrocarpon HOM05D005553 ORTHO05D006866 3.0e-172 609.0 429 70.4
CSS0038931 Camellia sinensis var. sinensis HOM05D005553 ORTHO05D006866 4.2e-166 588.6 443 68.4
Hma1.2p1_1018F.1_g248400 Hydrangea macrophylla HOM05D005553 ORTHO05D006866 1.1e-163 580.5 403 71.5
Nn1g07927 Nelumbo nucifera HOM05D005553 ORTHO05D006866 4.6e-157 558.5 442 63.1
Aqoxy2G03234 Aquilegia oxysepala HOM05D005553 ORTHO05D006866 5.8e-152 541.6 419 61.6
CANSAT01G0440 Cannabis sativa HOM05D005553 ORTHO05D006866 5.8e-152 541.6 430 62.1
Sc05g0002010 Simmondsia chinensis HOM05D005553 ORTHO05D006866 5.8e-152 541.6 436 61.5
DCAR_023559 Daucus carota HOM05D005553 ORTHO05D006866 9.9e-152 540.8 423 64.3
Haze_24838 Corylus avellana HOM05D005553 ORTHO05D006866 2.2e-151 539.7 448 62.9
Haze_24835 Corylus avellana HOM05D005553 ORTHO05D006866 6.4e-151 538.1 447 63.1
HanXRQChr07g0189551 Helianthus annuus HOM05D005553 ORTHO05D006866 8.4e-151 537.7 451 60.5
Cfa002842 Carpinus fangiana HOM05D005553 ORTHO05D006866 1.9e-150 536.6 414 65.5
Prupe.8G200200 Prunus persica HOM05D005553 ORTHO05D006866 1.8e-148 530.0 427 62.8
Nitab4.5_0000045g0420 Nicotiana tabacum HOM05D005553 ORTHO05D006866 2.5e-147 526.2 461 59.0
Solyc09g059600.4 Solanum lycopersicum HOM05D005553 ORTHO05D006866 3.3e-147 525.8 444 61.7
Sopen09g022770 Solanum pennellii HOM05D005553 ORTHO05D006866 7.4e-147 524.6 444 61.7
Lsat_1_v5_gn_9_13060 Lactuca sativa HOM05D005553 ORTHO05D006866 1.3e-146 523.9 451 59.9
PGSC0003DMG400017493 Solanum tuberosum HOM05D005553 ORTHO05D006866 4.8e-146 521.9 444 61.5
Nitab4.5_0000345g0010 Nicotiana tabacum HOM05D005553 ORTHO05D006866 8.2e-146 521.2 475 57.7
Ah.08g214520 Amaranthus hybridus HOM05D005553 ORTHO05D006866 1.8e-145 520.0 446 58.5
MD10G1161200 Malus domestica HOM05D005553 ORTHO05D006866 1.8e-145 520.0 426 61.7
Hund05570 Selenicereus undatus HOM05D005553 ORTHO05D006866 3.1e-145 519.2 441 59.9
Manes.13G047900 Manihot esculenta HOM05D005553 ORTHO05D006866 1.2e-144 517.3 446 60.1
Oeu023098.1 Olea europaea HOM05D005553 ORTHO05D006866 1.5e-144 516.9 428 61.7
MBI06_g04543_MAGBIO Magnolia biondii HOM05D005553 ORTHO05D006866 2.6e-144 516.2 419 61.3
PSO063G5023 Papaver somniferum HOM05D005553 ORTHO05D006866 2.6e-144 516.2 431 58.2
PSO339G3667 Papaver somniferum HOM05D005553 ORTHO05D006866 5.8e-144 515.0 418 59.8
PSO782G3165 Papaver somniferum HOM05D005553 ORTHO05D006866 1.7e-143 513.5 413 60.0
TWI36G0825 Tripterygium wilfordii HOM05D005553 ORTHO05D006866 8.4e-143 511.1 446 61.0
MSTRG.17999 Avicennia marina HOM05D005553 ORTHO05D006866 1.4e-142 510.4 441 59.0
Sed0021986 Sechium edule HOM05D005553 ORTHO05D006866 1.6e-141 506.9 441 59.9
Cpa.g.sc8.131 Carica papaya HOM05D005553 ORTHO05D006866 4.6e-141 505.4 451 59.0
CAN.G5.44 Capsicum annuum HOM05D005553 ORTHO05D006866 1.3e-140 503.8 444 58.8
Cc01_g16820 Coffea canephora HOM05D005553 ORTHO05D006866 1.3e-140 503.8 405 64.4
Eucgr.K02143 Eucalyptus grandis HOM05D005553 ORTHO05D006866 3.9e-140 502.3 442 58.6
CsaV3_6G002380 Cucumis sativus L. HOM05D005553 ORTHO05D006866 5.1e-140 501.9 424 60.1
PGR044G2083 Punica granatum HOM05D005553 ORTHO05D006866 1.5e-139 500.4 441 58.3
RcHm_v2.0_Chr6g0284311 Rosa chinensis HOM05D005553 ORTHO05D006866 1.9e-139 500.0 425 61.2
FAN27G0725 Fragaria x ananassa HOM05D005553 ORTHO05D006866 9.7e-139 497.7 414 62.3
SalBow3G3653 Salvia bowleyana HOM05D005553 ORTHO05D006866 1.6e-138 496.9 431 58.9
MELO3C020015.2 Cucumis melo HOM05D005553 ORTHO05D006866 5.3e-137 491.9 429 59.0
Duzib211G0174 Durio zibethinus HOM05D005553 ORTHO05D006866 2.0e-136 490.0 458 59.2
Rhsim01G0254300 Rhododendron simsii HOM05D005553 ORTHO05D006866 2.0e-136 490.0 436 59.6
Duzib138G1946 Durio zibethinus HOM05D005553 ORTHO05D006866 8.5e-135 484.6 450 58.2
FAN15G3597 Fragaria x ananassa HOM05D005553 ORTHO05D006866 1.9e-134 483.4 414 61.4
FvH4_2g18680 Fragaria vesca HOM05D005553 ORTHO05D006866 5.5e-134 481.9 407 61.9
GSVIVG01038357001 Vitis vinifera HOM05D005553 ORTHO05D006866 5.5e-134 481.9 406 62.6
Carub.0003s0670 Capsella rubella HOM05D005553 ORTHO05D006866 3.6e-133 479.2 450 56.4
FAN24G0205 Fragaria x ananassa HOM05D005553 ORTHO05D006866 3.6e-133 479.2 406 61.8
Thecc.01G222300 Theobroma cacao HOM05D005553 ORTHO05D006866 3.6e-133 479.2 427 60.4
Potri.002G245000 Populus trichocarpa HOM05D005553 ORTHO05D006866 7.9e-133 478.0 439 58.5
Gohir.D07G206400 Gossypium hirsutum HOM05D005553 ORTHO05D006866 5.1e-132 475.3 445 57.5
Sp3g06120 Schrenkiella parvula HOM05D005553 ORTHO05D006866 6.7e-132 474.9 416 59.4
BcaC05g29748 Brassica carinata HOM05D005553 ORTHO05D006866 1.9e-131 473.4 414 59.2
Migut.N00626 Erythranthe guttata HOM05D005553 ORTHO05D006866 1.9e-131 473.4 439 56.0
Thhalv10020331m.g Eutrema salsugineum HOM05D005553 ORTHO05D006866 1.9e-131 473.4 425 58.8
AL3G18430 Arabidopsis lyrata HOM05D005553 ORTHO05D006866 2.5e-131 473.0 419 58.9
Gorai.001G232700 Gossypium raimondii HOM05D005553 ORTHO05D006866 2.5e-131 473.0 439 57.9
Sabra02G0186400 Salix brachista HOM05D005553 ORTHO05D006866 3.3e-131 472.6 428 59.1
CARHR081820 Cardamine hirsuta HOM05D005553 ORTHO05D006866 2.8e-130 469.5 450 56.2
THA.LOC104818968 Tarenaya hassleriana HOM05D005553 ORTHO05D006866 2.8e-130 469.5 429 57.3
Gohir.A07G200000 Gossypium hirsutum HOM05D005553 ORTHO05D006866 3.7e-130 469.2 452 57.3
Ca_24091_v3 Cicer arietinum L. HOM05D005553 ORTHO05D006866 6.3e-130 468.4 448 55.4
CiPaw.03G146800 Carya illinoinensis HOM05D005553 ORTHO05D006866 8.2e-130 468.0 360 64.4
EL10Ac7g17878 Beta vulgaris HOM05D005553 ORTHO05D006866 2.4e-129 466.5 417 56.6
Ciclev10019403m.g Citrus clementina HOM05D005553 ORTHO05D006866 2.4e-129 466.5 439 56.9
Glyma.18G166600 Glycine max HOM05D005553 ORTHO05D006866 3.1e-129 466.1 445 55.1
Lalb_Chr03g0041571 Lupinus albus HOM05D005553 ORTHO05D006866 1.2e-128 464.2 441 56.0
AT3G07180 Arabidopsis thaliana HOM05D005553 ORTHO05D006866 1.5e-128 463.8 416 57.9
COL.COLO4_15644 Corchorus olitorius HOM05D005553 ORTHO05D006866 2.0e-128 463.4 440 57.3
BcaC05g29847 Brassica carinata HOM05D005553 ORTHO05D006866 3.4e-128 462.6 436 57.1
A05p41030 Brassica napus HOM05D005553 ORTHO05D006866 4.5e-128 462.2 440 56.8
Medtr7g056117 Medicago truncatula HOM05D005553 ORTHO05D006866 1.3e-127 460.7 444 54.1
Lj1g0021333 Lotus japonicus HOM05D005553 ORTHO05D006866 2.2e-127 459.9 429 57.3
BraA05t22829Z Brassica rapa HOM05D005553 ORTHO05D006866 3.8e-127 459.1 440 56.4
VMungo1383G1602 Vigna mungo HOM05D005553 ORTHO05D006866 5.0e-127 458.8 443 54.4
arahy.Tifrunner.gnm1.ann1.K25WW2 Arachis hypogaea HOM05D005553 ORTHO05D006866 8.5e-127 458.0 435 54.0
arahy.Tifrunner.gnm1.ann1.T3HSIJ Arachis hypogaea HOM05D005553 ORTHO05D006866 1.1e-126 457.6 435 54.7
TAR365G1156 Trochodendron aralioides HOM05D005553 ORTHO05D006866 1.9e-126 456.8 315 68.3
Phvul.008G130400 Phaseolus vulgaris HOM05D005553 ORTHO05D006866 4.2e-126 455.7 445 54.8
QL09p052121 Quercus lobata HOM05D005553 ORTHO05D006866 9.4e-126 454.5 409 59.7
QL09p052989 Quercus lobata HOM05D005553 ORTHO05D006866 1.6e-125 453.8 409 59.7
AL384U10020 Arabidopsis lyrata HOM05D005553 ORTHO05D006866 2.7e-125 453.0 415 57.3
C05p60190 Brassica napus HOM05D005553 ORTHO05D006866 3.6e-125 452.6 436 56.2
BolC5t34669H Brassica oleracea HOM05D005553 ORTHO05D006866 3.6e-125 452.6 436 56.2
ATR0609G062 Amborella trichopoda HOM05D005553 ORTHO05D006866 1.0e-124 451.1 407 53.8
Psat3g147960 Pisum sativum HOM05D005553 ORTHO05D006866 1.0e-124 451.1 444 53.6
Glyma.08G349700 Glycine max HOM05D005553 ORTHO05D006866 3.9e-124 449.1 444 53.6
ECA247G0750 Erigeron canadensis HOM05D005553 ORTHO05D006866 5.7e-123 445.3 435 56.3
CDE08G1475 Ceratophyllum demersum HOM05D005553 ORTHO05D006866 1.1e-121 441.0 444 50.2
Atru.chr6.1417 Acer truncatum HOM05D005553 ORTHO05D006866 4.1e-121 439.1 434 56.7
TPR.G6452 Trifolium pratense HOM05D005553 ORTHO05D006866 5.3e-121 438.7 466 51.3
Aa31LG5G17740 Aethionema arabicum HOM05D005553 ORTHO05D006866 6.5e-119 431.8 426 54.2
Actinidia23714 Actinidia chinensis HOM05D005553 ORTHO05D006866 1.8e-116 423.7 443 55.3
Actinidia09473 Actinidia chinensis HOM05D005553 ORTHO05D006866 3.9e-116 422.5 442 53.6
ClCG09G008830 Citrullus lanatus HOM05D005553 ORTHO05D006866 3.9e-116 422.5 407 54.8
arahy.Tifrunner.gnm1.ann1.B0WXN9 Arachis hypogaea HOM05D005553 ORTHO05D006866 2.6e-115 419.9 413 53.8
arahy.Tifrunner.gnm1.ann1.84RPTF Arachis hypogaea HOM05D005553 ORTHO05D006866 4.4e-115 419.1 419 52.7
AUR62001118 Chenopodium quinoa HOM05D005553 ORTHO05D006866 8.2e-114 414.8 441 50.6
SHI14561 Sapria himalayana HOM05D005553 ORTHO05D006866 2.6e-112 409.8 428 52.3
Peaxi162Scf00238g00217 Petunia axillaris HOM05D005553 ORTHO05D006866 1.3e-111 407.5 415 53.3
arahy.Tifrunner.gnm1.ann1.62F6YN Arachis hypogaea HOM05D005553 ORTHO05D006866 2.9e-111 406.4 381 57.0
DCAR_000631 Daucus carota HOM05D005553 ORTHO05D006866 6.5e-111 405.2 429 51.7
Os01g0907300 Oryza sativa ssp. japonica HOM05D005553 ORTHO05D006866 3.1e-105 386.3 434 48.4
Zm00001eb365330 Zea mays HOM05D005553 ORTHO05D006866 8.5e-103 378.3 455 47.0
AUR62016558 Chenopodium quinoa HOM05D005553 ORTHO05D006866 4.4e-99 365.9 433 47.1
arahy.Tifrunner.gnm1.ann1.ET68I8 Arachis hypogaea HOM05D005553 ORTHO05D006866 2.9e-95 353.2 364 50.3
arahy.Tifrunner.gnm1.ann1.SPK719 Arachis hypogaea HOM05D005553 ORTHO05D006866 2.4e-89 333.6 388 46.6
arahy.Tifrunner.gnm1.ann1.YI9T1V Arachis hypogaea HOM05D005553 ORTHO05D006866 2.3e-84 317.0 402 44.8
QL05p022419 Quercus lobata HOM05D005553 ORTHO05D006866 1.5e-78 297.7 203 70.0
QL02p097148 Quercus lobata HOM05D005553 ORTHO05D006866 2.5e-78 297.0 204 69.1
Pp3c13_19160 Physcomitrium patens HOM05D005553 ORTHO05D006866 8.0e-77 292.0 411 41.4
unitig_0.g372 Utricularia gibba HOM05D005553 ORTHO05D006866 1.4e-76 291.2 429 41.7
Potri.002G244801 Populus trichocarpa HOM05D005553 ORTHO05D006866 5.4e-73 279.3 168 75.6
AagrBONN_evm.TU.Sc2ySwM_117.1632 Anthoceros agrestis HOM05D005553 ORTHO05D006866 7.5e-67 258.8 416 36.8
Mapoly0045s0104 Marchantia polymorpha HOM05D005553 ORTHO05D006866 8.3e-66 255.4 440 34.8
SMO353G0187 Selaginella moellendorffii HOM05D005553 ORTHO05D006866 3.6e-61 240.0 400 36.5
HPP92_001410 Vanilla planifolia HOM05D005553 ORTHO05D006866 3.4e-59 233.4 204 57.4
arahy.Tifrunner.gnm1.ann1.DF0SS3 Arachis hypogaea HOM05D005553 ORTHO05D006866 4.4e-59 233.0 291 45.0
CBR_g46590 Chara braunii HOM05D005553 ORTHO05D006866 3.5e-40 170.2 180 45.0
SEGI_35984 Sequoiadendron giganteum HOM05D005553 ORTHO05D006866 9.3e-33 145.6 274 37.6
arahy.Tifrunner.gnm1.ann1.UUY44J Arachis hypogaea HOM05D005553 ORTHO05D006866 3.0e-23 114.0 235 32.8
TAR365G0595 Trochodendron aralioides HOM05D005553 ORTHO05D006866 1.6e-16 91.7 100 58.0
EL10Ac7g17877 Beta vulgaris HOM05D005553 ORTHO05D006866 1.3e-13 82.0 61 60.7
VMungo1383G0327 Vigna mungo HOM05D005553 ORTHO05D006866 3.4e-11 73.9 55 60.0
HPP92_001419 Vanilla planifolia HOM05D005553 ORTHO05D008496 1.3e-10 72.0 36 80.6
SEGI_34191 Sequoiadendron giganteum HOM05D005553 ORTHO05D006866 1.2e-08 65.5 58 50.0
A05p41020 Brassica napus HOM05D005553 ORTHO05D006866 1.4e-07 62.0 42 69.0
Cre01.g013400 Chlamydomonas reinhardtii HOM05D005553 ORTHO05D006866 5.7e-06 56.6 276 21.7


User provided reference genes

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