Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv19113 Davidia involucrata HOM05D006398 ORTHO05D007983 3.5e-77 291.6 152 100.0
Dinv24399 Davidia involucrata HOM05D006398 ORTHO05D007983 7.2e-62 240.7 152 84.9
Dinv28289 Davidia involucrata HOM05D006398 ORTHO05D007983 7.2e-62 240.7 152 84.9
Hma1.2p1_0085F.1_g044270 Hydrangea macrophylla HOM05D006398 ORTHO05D007983 1.5e-51 206.5 152 74.3
CSS0046434 Camellia sinensis var. sinensis HOM05D006398 ORTHO05D007983 4.4e-51 204.9 153 76.5
CSS0002146 Camellia sinensis var. sinensis HOM05D006398 ORTHO05D007983 9.7e-51 203.8 153 76.5
TAR381G1497 Trochodendron aralioides HOM05D006398 ORTHO05D007983 4.5e-48 194.9 149 71.8
Thecc.04G122700 Theobroma cacao HOM05D006398 ORTHO05D007983 3.2e-46 188.7 147 67.3
Prupe.7G188600 Prunus persica HOM05D006398 ORTHO05D007983 7.2e-46 187.6 147 70.1
Lj4P245T44 Lonicera japonica HOM05D006398 ORTHO05D007983 3.0e-44 182.2 142 76.1
TAR376G1029 Trochodendron aralioides HOM05D006398 ORTHO05D007983 3.0e-44 182.2 150 68.7
Manes.02G117704 Manihot esculenta HOM05D006398 ORTHO05D007983 3.9e-44 181.8 149 67.8
vmacro20410 Vaccinium macrocarpon HOM05D006398 ORTHO05D007983 3.9e-44 181.8 145 71.0
Actinidia28761 Actinidia chinensis HOM05D006398 ORTHO05D007983 4.4e-43 178.3 151 66.2
Nn6g31587 Nelumbo nucifera HOM05D006398 ORTHO05D007983 5.3e-41 171.4 150 66.0
Cfa011161 Carpinus fangiana HOM05D006398 ORTHO05D007983 2.0e-40 169.5 144 66.0
MBI04_g11522_MAGBIO Magnolia biondii HOM05D006398 ORTHO05D007983 1.7e-39 166.4 149 63.8
Manes.01G158600 Manihot esculenta HOM05D006398 ORTHO05D007983 1.7e-39 166.4 143 65.0
Rhsim10G0190200 Rhododendron simsii HOM05D006398 ORTHO05D007983 5.0e-39 164.9 105 80.0
Ca_25041_v3 Cicer arietinum L. HOM05D006398 ORTHO05D007983 6.5e-39 164.5 145 62.8
COL.COLO4_15698 Corchorus olitorius HOM05D006398 ORTHO05D007983 2.5e-38 162.5 147 62.6
Potri.011G146400 Populus trichocarpa HOM05D006398 ORTHO05D007983 4.2e-38 161.8 147 59.9
FAN26G0304 Fragaria x ananassa HOM05D006398 ORTHO05D007983 5.5e-38 161.4 147 61.2
Medtr5g025015 Medicago truncatula HOM05D006398 ORTHO05D007983 5.5e-38 161.4 145 63.4
FAN23G0152 Fragaria x ananassa HOM05D006398 ORTHO05D007983 9.4e-38 160.6 146 61.0
Atru.chr3.7 Acer truncatum HOM05D006398 ORTHO05D007983 1.6e-37 159.8 148 64.2
DCAR_014127 Daucus carota HOM05D006398 ORTHO05D007983 1.6e-37 159.8 143 67.1
FvH4_1g09810 Fragaria vesca HOM05D006398 ORTHO05D007983 8.0e-37 157.5 147 59.2
FAN19G1193 Fragaria x ananassa HOM05D006398 ORTHO05D007983 8.0e-37 157.5 147 59.2
Gohir.A07G076575 Gossypium hirsutum HOM05D006398 ORTHO05D007983 1.0e-36 157.1 147 57.8
Nitab4.5_0012518g0010 Nicotiana tabacum HOM05D006398 ORTHO05D007983 1.4e-36 156.8 150 61.3
Gorai.001G086400 Gossypium raimondii HOM05D006398 ORTHO05D007983 1.8e-36 156.4 147 57.8
Oeu024785.2 Olea europaea HOM05D006398 ORTHO05D007983 1.8e-36 156.4 147 61.9
TPR.G33762 Trifolium pratense HOM05D006398 ORTHO05D007983 1.8e-36 156.4 145 61.4
CiPaw.03G212200 Carya illinoinensis HOM05D006398 ORTHO05D007983 2.3e-36 156.0 145 62.8
Psat2g147080 Pisum sativum HOM05D006398 ORTHO05D007983 3.0e-36 155.6 144 60.4
Gohir.D07G081300 Gossypium hirsutum HOM05D006398 ORTHO05D007983 1.2e-35 153.7 147 57.1
Duzib133G0235 Durio zibethinus HOM05D006398 ORTHO05D007983 2.0e-35 152.9 145 57.2
Sopen02g017390 Solanum pennellii HOM05D006398 ORTHO05D007983 4.4e-35 151.8 150 59.3
QL06p053503 Quercus lobata HOM05D006398 ORTHO05D007983 5.7e-35 151.4 151 59.6
Solyc02g068290.2 Solanum lycopersicum HOM05D006398 ORTHO05D007983 5.7e-35 151.4 150 59.3
Nitab4.5_0011544g0020 Nicotiana tabacum HOM05D006398 ORTHO05D007983 7.5e-35 151.0 141 61.0
Sabra11G0131300 Salix brachista HOM05D006398 ORTHO05D007983 9.7e-35 150.6 142 58.5
PGSC0003DMG400009426 Solanum tuberosum HOM05D006398 ORTHO05D007983 1.7e-34 149.8 150 60.0
FAN28G0584 Fragaria x ananassa HOM05D006398 ORTHO05D007983 3.7e-34 148.7 147 57.1
HanXRQChr10g0316121 Helianthus annuus HOM05D006398 ORTHO05D007983 4.8e-34 148.3 137 62.8
Lalb_Chr16g0380261 Lupinus albus HOM05D006398 ORTHO05D007983 1.1e-33 147.1 145 57.9
MSTRG.19082 Avicennia marina HOM05D006398 ORTHO05D007983 2.4e-33 146.0 150 56.0
Cfa007121 Carpinus fangiana HOM05D006398 ORTHO05D007983 3.1e-33 145.6 145 58.6
CsaV3_6G047960 Cucumis sativus L. HOM05D006398 ORTHO05D007983 3.1e-33 145.6 141 61.0
Lj2g0016631 Lotus japonicus HOM05D006398 ORTHO05D007983 4.1e-33 145.2 145 58.6
SalBow3G3387 Salvia bowleyana HOM05D006398 ORTHO05D007983 4.1e-33 145.2 152 58.6
Sed0010545 Sechium edule HOM05D006398 ORTHO05D007983 5.3e-33 144.8 137 60.6
MD15G1226600 Malus domestica HOM05D006398 ORTHO05D007983 9.1e-33 144.1 136 63.2
Gohir.A11G167300 Gossypium hirsutum HOM05D006398 ORTHO05D007983 1.2e-32 143.7 148 54.7
Cfa000559 Carpinus fangiana HOM05D006398 ORTHO05D007983 2.7e-32 142.5 92 79.3
PSO017G7180 Papaver somniferum HOM05D006398 ORTHO05D007983 3.5e-32 142.1 149 59.1
MELO3C007985.2 Cucumis melo HOM05D006398 ORTHO05D007983 5.9e-32 141.4 142 60.6
Gorai.007G185900 Gossypium raimondii HOM05D006398 ORTHO05D007983 7.7e-32 141.0 148 53.4
Hma1.2p1_0353F.1_g133130 Hydrangea macrophylla HOM05D006398 ORTHO05D007983 1.0e-31 140.6 152 55.9
PSO017G0885 Papaver somniferum HOM05D006398 ORTHO05D007983 1.3e-31 140.2 145 56.6
Sabra16G0308300 Salix brachista HOM05D006398 ORTHO05D007983 1.7e-31 139.8 147 53.7
Oeu000786.1 Olea europaea HOM05D006398 ORTHO05D007983 6.5e-31 137.9 150 54.7
Peaxi162Scf00981g00021 Petunia axillaris HOM05D006398 ORTHO05D007983 1.9e-30 136.3 147 57.1
Gohir.D11G173600 Gossypium hirsutum HOM05D006398 ORTHO05D007983 2.5e-30 136.0 142 52.1
Ciclev10026700m.g Citrus clementina HOM05D006398 ORTHO05D007983 9.4e-30 134.0 149 54.4
Aqoxy5G00947 Aquilegia oxysepala HOM05D006398 ORTHO05D007983 2.1e-29 132.9 149 54.4
RcHm_v2.0_Chr2g0096641 Rosa chinensis HOM05D006398 ORTHO05D007983 1.8e-28 129.8 147 51.7
ECA238G1438 Erigeron canadensis HOM05D006398 ORTHO05D007983 1.5e-27 126.7 142 57.0
Eucgr.J02575 Eucalyptus grandis HOM05D006398 ORTHO05D007983 2.6e-27 125.9 144 52.1
TAR628G0945 Trochodendron aralioides HOM05D006398 ORTHO05D007983 7.5e-27 124.4 107 65.4
MD02G1107400 Malus domestica HOM05D006398 ORTHO05D007983 9.8e-27 124.0 89 75.3
TWI53G1768 Tripterygium wilfordii HOM05D006398 ORTHO05D007983 4.8e-26 121.7 140 52.1
CAN.G883.23 Capsicum annuum HOM05D006398 ORTHO05D007983 1.4e-25 120.2 150 52.7
PGR119G1180 Punica granatum HOM05D006398 ORTHO05D007983 3.1e-25 119.0 146 58.2
Glyma.11G089000 Glycine max HOM05D006398 ORTHO05D007983 5.4e-25 118.2 145 51.0
EL10Ac5g11754 Beta vulgaris HOM05D006398 ORTHO05D007983 1.2e-24 117.1 146 50.0
CANSAT56G1034 Cannabis sativa HOM05D006398 ORTHO05D007983 2.7e-24 115.9 143 51.7
Migut.J00328 Erythranthe guttata HOM05D006398 ORTHO05D007983 3.5e-24 115.5 150 48.7
SGA_v2.0_scaffold126G33784 Striga asiatica HOM05D006398 ORTHO05D007983 7.7e-24 114.4 147 51.7
ATR0605G223 Amborella trichopoda HOM05D006398 ORTHO05D007983 1.0e-23 114.0 144 52.8
PGR042G1229 Punica granatum HOM05D006398 ORTHO05D007983 1.1e-22 110.5 145 53.8
Phvul.002G119800 Phaseolus vulgaris HOM05D006398 ORTHO05D007983 1.9e-22 109.8 141 51.1
Sed0016714 Sechium edule HOM05D006398 ORTHO05D007983 7.2e-22 107.8 115 57.4
Lsat_1_v5_gn_2_72860 Lactuca sativa HOM05D006398 ORTHO05D007983 9.5e-22 107.5 75 69.3
VMungo1215G0575 Vigna mungo HOM05D006398 ORTHO05D007983 1.6e-21 106.7 141 49.6
Glyma.01G155800 Glycine max HOM05D006398 ORTHO05D007983 2.1e-21 106.3 129 48.8
CDE04G3216 Ceratophyllum demersum HOM05D006398 ORTHO05D007983 3.6e-21 105.5 155 49.0
CDE06G2001 Ceratophyllum demersum HOM05D006398 ORTHO05D007983 3.6e-21 105.5 138 48.6
HPP92_018846 Vanilla planifolia HOM05D006398 ORTHO05D007983 1.0e-20 104.0 142 48.6
Sc03g0004180 Simmondsia chinensis HOM05D006398 ORTHO05D007983 1.8e-20 103.2 146 42.5
Ah.02g115220 Amaranthus hybridus HOM05D006398 ORTHO05D007983 2.3e-20 102.8 142 46.5
Cfa012756 Carpinus fangiana HOM05D006398 ORTHO05D007983 6.8e-20 101.3 99 56.6
Haze_03650 Corylus avellana HOM05D000071 ORTHO05D007983 2.6e-19 99.4 104 55.8
HPP92_018898 Vanilla planifolia HOM05D006398 ORTHO05D007983 3.1e-17 92.4 146 44.5
Os02g0193500 Oryza sativa ssp. japonica HOM05D006398 ORTHO05D007983 2.0e-16 89.7 145 43.4
Lalb_Chr05g0215011 Lupinus albus HOM05D006398 ORTHO05D007983 3.3e-14 82.4 145 40.0
Cpa.g.sc178.36 Carica papaya HOM05D006398 ORTHO05D007983 2.1e-13 79.7 104 46.2
SHI11157 Sapria himalayana HOM05D006398 ORTHO05D007983 1.8e-12 76.6 134 42.5
Thhalv10010838m.g Eutrema salsugineum HOM05D006398 ORTHO05D007983 8.9e-12 74.3 117 42.7
Zm00001eb236520 Zea mays HOM05D006398 ORTHO05D007983 8.9e-12 74.3 149 40.9
arahy.Tifrunner.gnm1.ann1.GQ5KDA Arachis hypogaea HOM05D006398 ORTHO05D007983 5.7e-11 71.6 51 72.5
SEGI_02084 Sequoiadendron giganteum HOM05D006398 ORTHO05D007983 5.7e-11 71.6 135 38.5
AUR62036260 Chenopodium quinoa HOM05D006398 ORTHO05D007983 1.7e-10 70.1 147 34.7
AUR62039711 Chenopodium quinoa HOM05D006398 ORTHO05D007983 8.3e-10 67.8 147 34.7
A03p48310 Brassica napus HOM05D006398 ORTHO05D007983 2.4e-09 66.2 93 48.4
AT3G51500 Arabidopsis thaliana HOM05D006398 ORTHO05D007983 7.0e-09 64.7 142 40.1
THA.LOC109117268 Tarenaya hassleriana HOM05D006398 ORTHO05D007983 7.0e-09 64.7 146 41.1
Sp5g10740 Schrenkiella parvula HOM05D006398 ORTHO05D007983 9.2e-09 64.3 119 42.0
Carub.0005s1788 Capsella rubella HOM05D006398 ORTHO05D007983 1.2e-08 63.9 121 39.7
unitig_8.g4055 Utricularia gibba HOM05D006398 ORTHO05D007983 1.6e-08 63.5 128 39.1
AL5G31940 Arabidopsis lyrata HOM05D006398 ORTHO05D007983 3.0e-07 59.3 94 42.6
A01p23410 Brassica napus HOM05D006398 ORTHO05D007983 3.0e-07 59.3 95 44.2
BraA01t02248Z Brassica rapa HOM05D006398 ORTHO05D007983 3.0e-07 59.3 95 44.2
Aa31LG4G7260 Aethionema arabicum HOM05D000087 ORTHO05D002585 8.6e-07 57.8 62 48.4
Atru.chr3.146 Acer truncatum HOM05D006398 ORTHO05D007983 4.3e-06 55.5 67 58.2
C01p29040 Brassica napus HOM05D006398 ORTHO05D007983 9.5e-06 54.3 94 42.6
BolC1t02836H Brassica oleracea HOM05D006398 ORTHO05D007983 9.5e-06 54.3 94 42.6


User provided reference genes

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