Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv19005 Davidia involucrata HOM05D002536 ORTHO05D006290 1.2e-228 796.2 400 100.0
Actinidia15923 Actinidia chinensis HOM05D002536 ORTHO05D006290 4.0e-197 691.4 390 87.4
GSVIVG01030877001 Vitis vinifera HOM05D002536 ORTHO05D006290 2.3e-184 649.0 389 81.7
Rhsim10G0079100 Rhododendron simsii HOM05D002536 ORTHO05D006290 1.2e-180 636.7 390 81.0
TAR371G0457 Trochodendron aralioides HOM05D002536 ORTHO05D006290 1.9e-178 629.4 387 79.3
Cc07_g08220 Coffea canephora HOM05D002536 ORTHO05D006290 1.3e-176 623.2 410 75.6
Manes.01G115300 Manihot esculenta HOM05D002536 ORTHO05D006290 8.7e-176 620.5 397 77.1
Atru.chr4.1673 Acer truncatum HOM05D002536 ORTHO05D006290 5.7e-175 617.8 401 77.8
Ciclev10011939m.g Citrus clementina HOM05D002536 ORTHO05D006290 1.4e-173 613.2 390 77.4
Oeu047421.1 Olea europaea HOM05D002536 ORTHO05D006290 1.2e-172 610.1 392 76.0
Cfa007855 Carpinus fangiana HOM05D002536 ORTHO05D006290 1.9e-170 602.8 423 71.9
MBI16_g05920_MAGBIO Magnolia biondii HOM05D002536 ORTHO05D006290 1.6e-169 599.7 393 74.8
TWI74G1499 Tripterygium wilfordii HOM05D002536 ORTHO05D006290 1.4e-168 596.7 401 73.8
Prupe.3G158200 Prunus persica HOM05D002536 ORTHO05D006290 5.1e-168 594.7 390 76.9
LjContig00141g0005291 Lotus japonicus HOM05D002536 ORTHO05D006290 4.3e-167 591.7 390 74.9
CiPaw.04G045800 Carya illinoinensis HOM05D002536 ORTHO05D006290 7.4e-167 590.9 396 74.5
PGSC0003DMG400030643 Solanum tuberosum HOM05D002536 ORTHO05D006290 1.3e-166 590.1 391 73.9
Glyma.02G247400 Glycine max HOM05D002536 ORTHO05D006290 1.4e-165 586.6 390 75.4
Eucgr.F02817 Eucalyptus grandis HOM05D002536 ORTHO05D006290 2.4e-165 585.9 390 72.1
QL11p004402 Quercus lobata HOM05D002536 ORTHO05D006290 5.3e-165 584.7 452 67.5
CAN.G625.81 Capsicum annuum HOM05D002536 ORTHO05D006290 6.9e-165 584.3 390 73.3
vmacro05501 Vaccinium macrocarpon HOM05D002536 ORTHO05D006290 9.1e-165 583.9 501 61.7
Sopen02g035950 Solanum pennellii HOM05D002536 ORTHO05D006290 1.5e-164 583.2 390 73.8
Nitab4.5_0004399g0050 Nicotiana tabacum HOM05D002536 ORTHO05D006290 7.7e-164 580.9 411 69.6
MD09G1261000 Malus domestica HOM05D002536 ORTHO05D006290 1.7e-163 579.7 396 75.0
Medtr5g079770 Medicago truncatula HOM05D002536 ORTHO05D006290 3.2e-162 575.5 390 73.3
THA.LOC104805600 Tarenaya hassleriana HOM05D002536 ORTHO05D006290 5.5e-162 574.7 402 71.4
Sabra17G0102100 Salix brachista HOM05D002536 ORTHO05D006290 9.4e-162 573.9 403 72.0
Hund13689 Selenicereus undatus HOM05D002536 ORTHO05D006290 1.6e-161 573.2 390 72.6
COL.COLO4_15704 Corchorus olitorius HOM05D002536 ORTHO05D006290 2.7e-161 572.4 398 70.6
Migut.L00470 Erythranthe guttata HOM05D002536 ORTHO05D006290 1.8e-160 569.7 390 72.3
PGR004G1192 Punica granatum HOM05D002536 ORTHO05D006290 5.1e-160 568.2 390 69.7
Psat2g045240 Pisum sativum HOM05D002536 ORTHO05D006290 6.7e-160 567.8 390 72.6
EL10Ac2g04489 Beta vulgaris HOM05D002536 ORTHO05D006290 1.1e-159 567.0 385 71.7
Aqoxy3G04016 Aquilegia oxysepala HOM05D002536 ORTHO05D006290 2.6e-159 565.8 389 71.0
Sabra17G0104800 Salix brachista HOM05D002536 ORTHO05D006290 4.4e-159 565.1 477 63.3
CANSAT78G2192 Cannabis sativa HOM05D002536 ORTHO05D006290 7.4e-159 564.3 390 72.1
ECA232G3521 Erigeron canadensis HOM05D002536 ORTHO05D006290 7.4e-159 564.3 401 70.6
Phvul.008G233500 Phaseolus vulgaris HOM05D002536 ORTHO05D006290 9.7e-159 563.9 390 72.1
Ca_05868_v3 Cicer arietinum L. HOM05D002536 ORTHO05D006290 2.2e-158 562.8 395 71.6
Gorai.004G064600 Gossypium raimondii HOM05D002536 ORTHO05D006290 2.2e-158 562.8 401 70.3
Nitab4.5_0002248g0030 Nicotiana tabacum HOM05D002536 ORTHO05D006290 3.7e-158 562.0 396 71.2
Gohir.A08G052800 Gossypium hirsutum HOM05D002536 ORTHO05D006290 8.2e-158 560.8 401 70.1
HanXRQChr11g0325221 Helianthus annuus HOM05D002536 ORTHO05D006290 8.2e-158 560.8 389 72.0
Ah.10g037990 Amaranthus hybridus HOM05D002536 ORTHO05D006290 1.8e-157 559.7 390 68.7
BraA07t30972Z Brassica rapa HOM05D002536 ORTHO05D006290 2.4e-157 559.3 395 71.4
Lsat_1_v5_gn_4_154740 Lactuca sativa HOM05D002536 ORTHO05D006290 4.1e-157 558.5 389 70.7
Gohir.D08G062400 Gossypium hirsutum HOM05D002536 ORTHO05D006290 7.0e-157 557.8 401 69.6
RcHm_v2.0_Chr3g0492101 Rosa chinensis HOM05D002536 ORTHO05D006290 9.1e-157 557.4 396 71.0
VMungo0647G1217 Vigna mungo HOM05D002536 ORTHO05D006290 9.1e-157 557.4 390 71.3
BcaB03g15263 Brassica carinata HOM05D002536 ORTHO05D006290 1.2e-156 557.0 393 70.7
Thecc.04G122200 Theobroma cacao HOM05D002536 ORTHO05D006290 2.0e-156 556.2 393 70.2
Duzib211G0581 Durio zibethinus HOM05D002536 ORTHO05D006290 3.5e-156 555.4 401 70.1
CSS0023678 Camellia sinensis var. sinensis HOM05D002536 ORTHO05D006290 4.5e-156 555.1 431 68.2
DCAR_022460 Daucus carota HOM05D002536 ORTHO05D006290 4.5e-156 555.1 384 70.3
A07p33460 Brassica napus HOM05D002536 ORTHO05D006290 7.7e-156 554.3 395 70.6
BcaC08g46049 Brassica carinata HOM05D002536 ORTHO05D006290 1.0e-155 553.9 395 70.6
AT1G66510 Arabidopsis thaliana HOM05D002536 ORTHO05D006290 1.7e-155 553.1 393 69.7
arahy.Tifrunner.gnm1.ann1.3WSI1D Arachis hypogaea HOM05D002536 ORTHO05D006290 1.1e-154 550.4 416 67.5
Thhalv10018669m.g Eutrema salsugineum HOM05D002536 ORTHO05D006290 1.5e-154 550.1 393 69.7
FvH4_1g30040 Fragaria vesca HOM05D002536 ORTHO05D006290 1.5e-154 550.1 390 70.5
Lalb_Chr04g0251281 Lupinus albus HOM05D002536 ORTHO05D006290 1.5e-154 550.1 389 70.2
Potri.017G123900 Populus trichocarpa HOM05D002536 ORTHO05D006290 1.5e-154 550.1 356 76.1
CARHR058490 Cardamine hirsuta HOM05D002536 ORTHO05D006290 2.5e-154 549.3 401 68.6
arahy.Tifrunner.gnm1.ann1.DT5JRU Arachis hypogaea HOM05D002536 ORTHO05D006290 3.2e-154 548.9 414 67.6
Nn3g18196 Nelumbo nucifera HOM05D002536 ORTHO05D006290 1.2e-153 547.0 380 71.8
Sp5g21560 Schrenkiella parvula HOM05D002536 ORTHO05D006290 1.6e-153 546.6 393 69.0
CsaV3_1G043810 Cucumis sativus L. HOM05D002536 ORTHO05D006290 2.1e-153 546.2 394 68.3
Sed0021694 Sechium edule HOM05D002536 ORTHO05D006290 2.1e-153 546.2 393 67.9
BolC6t39073H Brassica oleracea HOM05D002536 ORTHO05D006290 2.7e-153 545.8 395 69.6
AL2G23020 Arabidopsis lyrata HOM05D002536 ORTHO05D006290 1.8e-152 543.1 393 68.4
C06p39850 Brassica napus HOM05D002536 ORTHO05D006290 3.0e-152 542.3 395 69.6
Carub.0002s1253 Capsella rubella HOM05D002536 ORTHO05D006290 8.8e-152 540.8 393 68.7
Glyma.14G068800 Glycine max HOM05D002536 ORTHO05D006290 2.6e-151 539.3 358 75.1
PSO017G6098 Papaver somniferum HOM05D002536 ORTHO05D006290 3.1e-149 532.3 393 67.7
Lj4A178G42 Lonicera japonica HOM05D002536 ORTHO05D006290 7.0e-149 531.2 442 63.8
MELO3C020300.2 Cucumis melo HOM05D002536 ORTHO05D006290 9.1e-149 530.8 392 66.1
SGA_v2.0_scaffold329G48866 Striga asiatica HOM05D002536 ORTHO05D006290 9.1e-149 530.8 390 67.9
FAN19G0538 Fragaria x ananassa HOM05D002536 ORTHO05D006290 5.0e-147 525.0 425 64.5
Aa31LG2G3150 Aethionema arabicum HOM05D002536 ORTHO05D006290 2.7e-145 519.2 397 66.2
FAN28G1150 Fragaria x ananassa HOM05D002536 ORTHO05D006290 2.7e-145 519.2 425 63.8
Haze_14213 Corylus avellana HOM05D002536 ORTHO05D008091 8.3e-142 507.7 382 68.3
Sc11g0008590 Simmondsia chinensis HOM05D002536 ORTHO05D006290 1.1e-141 507.3 330 74.5
Os04g0132300 Oryza sativa ssp. japonica HOM05D002536 ORTHO05D006290 2.5e-138 496.1 392 62.0
Lalb_Chr04g0249391 Lupinus albus HOM05D002536 ORTHO05D006290 1.0e-136 490.7 358 68.4
CDE04G0829 Ceratophyllum demersum HOM05D002536 ORTHO05D006290 5.0e-131 471.9 391 63.2
AUR62023246 Chenopodium quinoa HOM05D002536 ORTHO05D006290 6.8e-128 461.5 390 61.3
Zm00001eb088880 Zea mays HOM05D002536 ORTHO05D006290 7.0e-125 451.4 350 62.9
SalBow7G0143 Salvia bowleyana HOM05D002536 ORTHO05D006290 6.2e-121 438.3 312 68.9
Solyc02g091330.4 Solanum lycopersicum HOM05D002536 ORTHO05D006290 2.3e-120 436.4 283 75.6
Peaxi162Scf00803g00527 Petunia axillaris HOM05D002536 ORTHO05D006290 7.8e-116 421.4 272 76.1
AUR62023197 Chenopodium quinoa HOM05D002536 ORTHO05D006290 3.3e-114 416.0 360 59.7
unitig_32.g11881 Utricularia gibba HOM05D002536 ORTHO05D006290 4.0e-112 409.1 397 55.9
FAN28G0504 Fragaria x ananassa HOM05D002536 ORTHO05D006290 1.1e-106 391.0 292 69.9
Pp3c15_1450 Physcomitrium patens HOM05D002536 ORTHO05D006290 3.3e-98 362.8 396 48.0
Ca_05898_v3 Cicer arietinum L. HOM05D002536 ORTHO05D006290 1.5e-95 354.0 253 70.4
ATR0686G028 Amborella trichopoda HOM05D002536 ORTHO05D006290 4.4e-95 352.4 287 60.6
AagrBONN_evm.TU.Sc2ySwM_344.4243 Anthoceros agrestis HOM05D002536 ORTHO05D006290 7.6e-95 351.7 400 46.2
SMO196G0007 Selaginella moellendorffii HOM05D002536 ORTHO05D006290 4.6e-92 342.4 396 45.5
Cpa.g.sc116.21 Carica papaya HOM05D002536 ORTHO05D006290 2.4e-88 330.1 220 73.6
TPR.G3505 Trifolium pratense HOM05D002536 ORTHO05D006290 5.3e-88 328.9 234 70.5
MSTRG.3529 Avicennia marina HOM05D002536 ORTHO05D006290 6.9e-88 328.6 238 67.6
QL11p004257 Quercus lobata HOM05D002536 ORTHO05D006290 6.2e-81 305.4 193 80.8
CBR_g28641 Chara braunii HOM05D002536 ORTHO05D006290 6.4e-78 295.4 483 37.1
AagrBONN_evm.TU.Sc2ySwM_368.3391 Anthoceros agrestis HOM05D002536 ORTHO05D006290 3.4e-71 273.1 372 40.6
Mapoly0209s0005 Marchantia polymorpha HOM05D002536 ORTHO05D006290 6.3e-65 252.3 326 43.9
Cpa.g.sc116.20 Carica papaya HOM05D002536 ORTHO05D006290 3.8e-54 216.5 153 69.9
QL11p004418 Quercus lobata HOM05D002536 ORTHO05D006290 3.1e-48 196.8 156 67.3
Cre05.g244750 Chlamydomonas reinhardtii HOM05D002536 ORTHO05D006290 4.5e-39 166.4 529 25.5
QL11p004025 Quercus lobata HOM05D002536 ORTHO05D006290 4.7e-36 156.4 114 64.9
TPR.G3492 Trifolium pratense HOM05D002536 ORTHO05D006290 7.5e-34 149.1 104 69.2
TPR.G18743 Trifolium pratense HOM05D002536 ORTHO05D006290 2.4e-32 144.1 171 50.3
Gohir.A10G143300 Gossypium hirsutum HOM05D002536 ORTHO05D006290 1.5e-29 134.8 97 66.0
TPR.G4379 Trifolium pratense HOM05D002536 ORTHO05D006290 1.5e-29 134.8 182 43.4
Gohir.D02G177580 Gossypium hirsutum HOM05D002536 ORTHO05D006290 2.5e-29 134.0 97 66.0
Gohir.A07G193350 Gossypium hirsutum HOM05D002536 ORTHO05D006290 7.2e-29 132.5 97 64.9
Gohir.A08G229450 Gossypium hirsutum HOM05D002536 ORTHO05D006290 7.2e-29 132.5 97 64.9
Gohir.A12G000900 Gossypium hirsutum HOM05D002536 ORTHO05D006290 7.2e-29 132.5 97 64.9
TPR.G39323 Trifolium pratense HOM05D002536 ORTHO05D006290 7.2e-29 132.5 80 80.0
Gohir.A09G155300 Gossypium hirsutum HOM05D002536 ORTHO05D006290 2.1e-28 131.0 97 63.9
Gorai.004G103000 Gossypium raimondii HOM05D002536 ORTHO05D006290 2.1e-28 131.0 111 56.8
Gohir.D04G118901 Gossypium hirsutum HOM05D002536 ORTHO05D006290 8.0e-28 129.0 90 67.8
Gohir.D02G126132 Gossypium hirsutum HOM05D002536 ORTHO05D006290 4.0e-27 126.7 111 54.1
VMungo0464G1199 Vigna mungo HOM05D002536 ORTHO05D006290 9.8e-26 122.1 79 72.2
QL11p004209 Quercus lobata HOM05D002536 ORTHO05D006290 8.3e-25 119.0 114 54.4
Gorai.010G146900 Gossypium raimondii HOM05D002536 ORTHO05D006290 9.1e-24 115.5 79 65.8
Gohir.D06G126066 Gossypium hirsutum HOM05D002536 ORTHO05D006290 5.9e-23 112.8 68 73.5
TPR.G3463 Trifolium pratense HOM05D002536 ORTHO05D006290 2.9e-22 110.5 128 50.8
TPR.G3477 Trifolium pratense HOM05D002536 ORTHO05D006290 9.5e-21 105.5 141 46.8
SEGI_34356 Sequoiadendron giganteum HOM05D002536 ORTHO05D006290 4.0e-19 100.1 67 68.7
TPR.G15212 Trifolium pratense HOM05D002536 ORTHO05D006290 4.0e-19 100.1 71 67.6
Gohir.D03G005233 Gossypium hirsutum HOM05D002536 ORTHO05D006290 5.2e-19 99.8 67 71.6
Gorai.007G247100 Gossypium raimondii HOM05D002536 ORTHO05D006290 5.2e-19 99.8 67 71.6
Gorai.012G115800 Gossypium raimondii HOM05D002536 ORTHO05D006290 1.5e-18 98.2 67 70.1
FAN28G2473 Fragaria x ananassa HOM05D002536 ORTHO05D006290 3.4e-18 97.1 60 73.3
Gorai.003G061900 Gossypium raimondii HOM05D002536 ORTHO05D006290 1.8e-16 91.3 67 68.7
Gohir.D10G126550 Gossypium hirsutum HOM05D002536 ORTHO05D006290 7.0e-16 89.4 67 65.7
TPR.G5666 Trifolium pratense HOM05D002536 ORTHO05D006290 3.5e-15 87.0 73 63.0
TPR.G22657 Trifolium pratense HOM05D002536 ORTHO05D006290 4.5e-15 86.7 54 77.8
Gohir.D11G077800 Gossypium hirsutum HOM05D004753 ORTHO05D005920 3.6e-12 77.0 111 38.7
TPR.G25728 Trifolium pratense HOM05D002536 ORTHO05D006290 6.8e-11 72.8 129 36.4
SEGI_27826 Sequoiadendron giganteum HOM05D002536 ORTHO05D006290 2.9e-09 67.4 77 40.3


User provided reference genes

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