Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv19004 Davidia involucrata HOM05D002536 ORTHO05D008091 5.1e-169 597.8 333 100.0
Hma1.2p1_0283F.1_g113560 Hydrangea macrophylla HOM05D002536 ORTHO05D008091 5.5e-131 471.5 331 82.5
GSVIVG01030878001 Vitis vinifera HOM05D002536 ORTHO05D008091 7.1e-123 444.5 322 78.0
Actinidia15922 Actinidia chinensis HOM05D002536 ORTHO05D008091 9.3e-123 444.1 322 78.6
Cfa007856 Carpinus fangiana HOM05D002536 ORTHO05D008091 9.7e-120 434.1 324 75.3
CiPaw.04G045700 Carya illinoinensis HOM05D002536 ORTHO05D008091 7.2e-115 417.9 323 73.4
TAR622G0880 Trochodendron aralioides HOM05D002536 ORTHO05D008091 2.1e-114 416.4 286 77.6
Prupe.3G152500 Prunus persica HOM05D002536 ORTHO05D008091 7.9e-114 414.5 326 72.4
Atru.chr1.1780 Acer truncatum HOM05D002536 ORTHO05D008091 2.3e-113 412.9 322 70.2
Atru.chr1.1783 Acer truncatum HOM05D002536 ORTHO05D008091 2.3e-113 412.9 322 70.2
GSVIVG01030879001 Vitis vinifera HOM05D002536 ORTHO05D008091 1.5e-112 410.2 268 82.8
Ciclev10012168m.g Citrus clementina HOM05D002536 ORTHO05D008091 7.4e-112 407.9 339 70.2
RcHm_v2.0_Chr3g0492091 Rosa chinensis HOM05D002536 ORTHO05D008091 7.4e-112 407.9 324 75.9
FvH4_1g30050 Fragaria vesca HOM05D002536 ORTHO05D008091 1.7e-111 406.8 323 76.2
Haze_14213 Corylus avellana HOM05D002536 ORTHO05D008091 2.2e-111 406.4 293 76.8
Sabra04G0061700 Salix brachista HOM05D002536 ORTHO05D008091 2.8e-111 406.0 330 68.5
QL05p059601 Quercus lobata HOM05D002536 ORTHO05D008091 6.3e-111 404.8 322 72.4
FAN23G2237 Fragaria x ananassa HOM05D002536 ORTHO05D008091 1.4e-110 403.7 326 72.7
QL05p059839 Quercus lobata HOM05D002536 ORTHO05D008091 4.1e-110 402.1 301 75.1
CANSAT78G0797 Cannabis sativa HOM05D002536 ORTHO05D008091 5.3e-110 401.7 324 69.4
CSS0023678 Camellia sinensis var. sinensis HOM05D002536 ORTHO05D006290 9.1e-110 401.0 265 83.4
Sc10g0000870 Simmondsia chinensis HOM05D002536 ORTHO05D008091 2.0e-109 399.8 322 72.0
HanXRQChr11g0325231 Helianthus annuus HOM05D002536 ORTHO05D008091 4.5e-109 398.7 318 68.9
Duzib248G1146 Durio zibethinus HOM05D002536 ORTHO05D008091 7.7e-109 397.9 330 73.9
FAN26G2179 Fragaria x ananassa HOM05D002536 ORTHO05D008091 7.7e-109 397.9 323 74.9
EL10Ac2g04494 Beta vulgaris HOM05D002536 ORTHO05D008091 1.3e-108 397.1 286 74.1
Lj2P435T31 Lonicera japonica HOM05D002536 ORTHO05D008091 2.2e-108 396.4 260 79.2
AUR62023248 Chenopodium quinoa HOM05D002536 ORTHO05D008091 5.0e-108 395.2 325 67.1
Rhsim10G0078900 Rhododendron simsii HOM05D002536 ORTHO05D008091 5.0e-108 395.2 281 75.1
Gohir.A04G142800 Gossypium hirsutum HOM05D002536 ORTHO05D008091 6.5e-108 394.8 330 72.7
Ah.10g037920 Amaranthus hybridus HOM05D002536 ORTHO05D008091 8.5e-108 394.4 324 65.4
FAN19G1396 Fragaria x ananassa HOM05D002536 ORTHO05D008091 8.5e-108 394.4 265 84.9
QL05p058873 Quercus lobata HOM05D002536 ORTHO05D008091 8.5e-108 394.4 268 79.5
Potri.004G091600 Populus trichocarpa HOM05D002536 ORTHO05D008091 1.1e-107 394.0 328 67.7
Cpa.g.sc116.19 Carica papaya HOM05D002536 ORTHO05D008091 1.4e-107 393.7 322 72.4
MD09G1260700 Malus domestica HOM05D002536 ORTHO05D008091 2.5e-107 392.9 265 81.1
Hund13690 Selenicereus undatus HOM05D002536 ORTHO05D008091 2.5e-107 392.9 270 78.1
ECA232G4028 Erigeron canadensis HOM05D002536 ORTHO05D008091 3.2e-107 392.5 322 67.1
COL.COLO4_16592 Corchorus olitorius HOM05D002536 ORTHO05D008091 7.2e-107 391.3 334 69.2
Eucgr.F02816 Eucalyptus grandis HOM05D002536 ORTHO05D008091 9.4e-107 391.0 326 67.5
Gohir.D04G186100 Gossypium hirsutum HOM05D002536 ORTHO05D008091 2.1e-106 389.8 330 72.1
Nn3g18195 Nelumbo nucifera HOM05D002536 ORTHO05D008091 4.7e-106 388.7 323 70.0
Gorai.012G182500 Gossypium raimondii HOM05D002536 ORTHO05D008091 6.1e-106 388.3 330 71.8
Thecc.02G292900 Theobroma cacao HOM05D002536 ORTHO05D008091 7.9e-106 387.9 329 72.6
Cc07_g08230 Coffea canephora HOM05D002536 ORTHO05D008091 1.4e-105 387.1 328 66.8
Aqoxy3G00142 Aquilegia oxysepala HOM05D002536 ORTHO05D008091 5.1e-105 385.2 287 70.4
Oeu047422.1 Olea europaea HOM05D002536 ORTHO05D008091 6.7e-105 384.8 326 72.1
TWI53G1346 Tripterygium wilfordii HOM05D002536 ORTHO05D008091 1.5e-104 383.6 324 65.1
Lsat_1_v5_gn_4_154760 Lactuca sativa HOM05D002536 ORTHO05D008091 2.0e-104 383.3 319 69.3
Phvul.004G133300 Phaseolus vulgaris HOM05D002536 ORTHO05D008091 2.0e-104 383.3 324 68.8
PGR004G1229 Punica granatum HOM05D002536 ORTHO05D008091 3.3e-104 382.5 272 77.6
Medtr5g086010 Medicago truncatula HOM05D002536 ORTHO05D008091 9.7e-104 380.9 323 65.0
Ca_06135_v3 Cicer arietinum L. HOM05D002536 ORTHO05D008091 1.7e-103 380.2 323 65.9
MSTRG.23612 Avicennia marina HOM05D002536 ORTHO05D008091 2.2e-103 379.8 324 66.0
Nitab4.5_0002248g0020 Nicotiana tabacum HOM05D002536 ORTHO05D008091 2.2e-103 379.8 324 67.6
Medtr5g087440 Medicago truncatula HOM05D002536 ORTHO05D008091 2.8e-103 379.4 323 64.7
Nitab4.5_0002456g0160 Nicotiana tabacum HOM05D002536 ORTHO05D008091 2.8e-103 379.4 324 67.9
LjContig00564g0008816 Lotus japonicus HOM05D002536 ORTHO05D008091 6.3e-103 378.3 316 66.8
VMungo1309G0890 Vigna mungo HOM05D002536 ORTHO05D008091 1.1e-102 377.5 323 67.5
TPR.G11790 Trifolium pratense HOM05D002536 ORTHO05D008091 3.1e-102 375.9 333 63.4
arahy.Tifrunner.gnm1.ann1.NZLK2N Arachis hypogaea HOM05D002536 ORTHO05D008091 4.1e-102 375.6 273 72.2
MELO3C020303.2 Cucumis melo HOM05D002536 ORTHO05D008091 4.1e-102 375.6 267 74.2
MBI16_g05920_MAGBIO Magnolia biondii HOM05D002536 ORTHO05D006290 5.3e-102 375.2 269 74.3
Sed0014940 Sechium edule HOM05D002536 ORTHO05D008091 5.3e-102 375.2 270 74.4
arahy.Tifrunner.gnm1.ann1.SZ684F Arachis hypogaea HOM05D002536 ORTHO05D008091 7.0e-102 374.8 323 65.3
Phvul.008G162400 Phaseolus vulgaris HOM05D002536 ORTHO05D008091 7.0e-102 374.8 323 67.2
Lalb_Chr03g0036071 Lupinus albus HOM05D002536 ORTHO05D008091 1.2e-101 374.0 323 64.1
Psat2g023480 Pisum sativum HOM05D002536 ORTHO05D008091 1.5e-101 373.6 324 63.3
DCAR_008922 Daucus carota HOM05D000103 ORTHO05D008091 2.6e-101 372.9 267 73.4
Sopen02g035940 Solanum pennellii HOM05D002536 ORTHO05D008091 2.6e-101 372.9 324 66.0
CsaV3_3G017670 Cucumis sativus L. HOM05D002536 ORTHO05D008091 7.7e-101 371.3 307 67.1
ClCG05G010840 Citrullus lanatus HOM05D002536 ORTHO05D008091 2.2e-100 369.8 269 74.0
Sp6g26760 Schrenkiella parvula HOM05D002536 ORTHO05D008091 2.2e-100 369.8 270 75.2
Solyc02g091320.4 Solanum lycopersicum HOM05D002536 ORTHO05D008091 2.9e-100 369.4 324 65.4
CAN.G625.80 Capsicum annuum HOM05D002536 ORTHO05D008091 5.0e-100 368.6 324 67.0
Peaxi162Scf00803g00531 Petunia axillaris HOM05D002536 ORTHO05D008091 1.1e-99 367.5 323 66.3
PGSC0003DMG400030642 Solanum tuberosum HOM05D002536 ORTHO05D008091 1.9e-99 366.7 324 66.7
A02p04220 Brassica napus HOM05D002536 ORTHO05D008091 2.1e-98 363.2 285 71.6
BraA02t05385Z Brassica rapa HOM05D002536 ORTHO05D008091 2.1e-98 363.2 285 71.6
Thhalv10014009m.g Eutrema salsugineum HOM05D002536 ORTHO05D008091 1.4e-97 360.5 270 73.0
BolC2t06821H Brassica oleracea HOM05D002536 ORTHO05D008091 1.8e-97 360.1 282 70.2
C02p09100 Brassica napus HOM05D002536 ORTHO05D008091 8.8e-97 357.8 289 68.9
SalBow3G4287 Salvia bowleyana HOM05D002536 ORTHO05D008091 9.7e-96 354.4 324 60.8
arahy.Tifrunner.gnm1.ann1.YLI9AK Arachis hypogaea HOM05D002536 ORTHO05D008091 2.8e-95 352.8 233 77.3
arahy.Tifrunner.gnm1.ann1.CBV847 Arachis hypogaea HOM05D002536 ORTHO05D008091 3.7e-95 352.4 237 76.4
Migut.H00262 Erythranthe guttata HOM05D002536 ORTHO05D008091 8.2e-95 351.3 324 61.7
Aa31LG11G12180 Aethionema arabicum HOM05D002536 ORTHO05D008091 1.8e-94 350.1 266 68.4
Manes.01G115200 Manihot esculenta HOM05D002536 ORTHO05D008091 6.5e-92 341.7 234 77.8
PSO782G0049 Papaver somniferum HOM05D002536 ORTHO05D008091 5.5e-91 338.6 331 59.5
CARHR195750 Cardamine hirsuta HOM05D002536 ORTHO05D008091 3.6e-90 335.9 274 69.3
AUR62023202 Chenopodium quinoa HOM05D002536 ORTHO05D008091 3.6e-90 335.9 276 68.8
Os01g0125700 Oryza sativa ssp. japonica HOM05D002536 ORTHO05D008091 8.0e-90 334.7 325 64.0
QL05p059463 Quercus lobata HOM05D002536 ORTHO05D008091 1.0e-89 334.3 268 67.2
AL6G28530 Arabidopsis lyrata HOM05D002536 ORTHO05D008091 1.4e-89 334.0 270 69.6
PSO478G1642 Papaver somniferum HOM05D002536 ORTHO05D008091 2.3e-89 333.2 329 59.3
Carub.0006s1568 Capsella rubella HOM05D002536 ORTHO05D008091 7.5e-88 328.2 269 68.8
CDE07G0699 Ceratophyllum demersum HOM05D002536 ORTHO05D008091 9.7e-88 327.8 290 64.8
FAN28G0948 Fragaria x ananassa HOM05D002536 ORTHO05D008091 3.7e-87 325.9 220 80.9
ATR0041G006 Amborella trichopoda HOM05D002536 ORTHO05D008091 1.2e-85 320.9 264 67.8
AT5G17460 Arabidopsis thaliana HOM05D002536 ORTHO05D008091 2.7e-82 309.7 234 72.6
BcaC03g13522 Brassica carinata HOM05D002536 ORTHO05D008091 1.2e-80 304.3 249 63.9
SHI17045 Sapria himalayana HOM05D002536 ORTHO05D008091 1.5e-80 303.9 271 69.4
Glyma.14G164000 Glycine max HOM05D002536 ORTHO05D008091 1.2e-74 284.3 324 57.4
SGA_v2.0_scaffold6G03263 Striga asiatica HOM05D002536 ORTHO05D008091 3.7e-71 272.7 336 52.1
SGA_v2.0_scaffold6G03262 Striga asiatica HOM05D002536 ORTHO05D008091 2.4e-70 270.0 338 49.4
SGA_v2.0_scaffold6G03266 Striga asiatica HOM05D002536 ORTHO05D008091 1.6e-69 267.3 238 63.4
Zm00001eb334950 Zea mays HOM05D002536 ORTHO05D008091 3.1e-65 253.1 180 71.7
MD09G1260800 Malus domestica HOM05D002536 ORTHO05D008091 3.4e-64 249.6 183 74.3
MBI16_g46274_MAGBIO Magnolia biondii HOM05D002536 ORTHO05D008091 2.7e-61 240.0 155 79.4
SEGI_34238 Sequoiadendron giganteum HOM05D002536 ORTHO05D008091 4.6e-61 239.2 264 52.7
SGA_v2.0_scaffold6G03268 Striga asiatica HOM05D002536 ORTHO05D008091 4.6e-61 239.2 293 52.6
Glyma.13G079200 Glycine max HOM05D002536 ORTHO05D008091 3.9e-60 236.1 234 62.0
unitig_899.g15351 Utricularia gibba HOM05D002536 ORTHO05D008091 5.6e-59 232.3 207 60.4
FAN28G0812 Fragaria x ananassa HOM05D002536 ORTHO05D008091 3.5e-45 186.4 264 53.8
MD09G1260900 Malus domestica HOM05D002536 ORTHO05D008091 6.6e-44 182.2 182 60.4
BcaB08g36768 Brassica carinata HOM05D002536 ORTHO05D007973 6.0e-37 159.1 129 62.0
A10p21940 Brassica napus HOM05D002536 ORTHO05D008091 9.9e-24 115.2 81 79.0
HPP92_000766 Vanilla planifolia HOM05D002536 ORTHO05D008091 1.7e-23 114.4 113 54.9
BcaC04g18790 Brassica carinata HOM05D002536 ORTHO05D008091 4.9e-15 86.3 87 56.3
BolC9t58807H Brassica oleracea HOM05D002536 ORTHO05D008091 6.5e-15 85.9 87 57.5
C09p59690 Brassica napus HOM05D002536 ORTHO05D008091 5.5e-14 82.8 87 56.3
BraA10t44252Z Brassica rapa HOM05D002536 ORTHO05D008091 4.5e-08 63.2 66 53.0
A10p21930 Brassica napus HOM05D002536 ORTHO05D008091 1.7e-07 61.2 66 53.0
CDE06G0370 Ceratophyllum demersum HOM05D002536 ORTHO05D008091 6.5e-07 59.3 97 40.2
SMO343G0062 Selaginella moellendorffii HOM05D067698 ORTHO05D050854 9.3e-06 55.5 99 32.3


User provided reference genes

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