Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv18994 Davidia involucrata HOM05D006195 ORTHO05D007710 2.1e-108 395.6 188 100.0
Dinv40483 Davidia involucrata HOM05D006195 ORTHO05D007710 7.2e-72 274.2 220 66.8
GSVIVG01003194001 Vitis vinifera HOM05D006195 ORTHO05D007710 2.3e-57 226.1 213 57.3
CiPaw.09G158100 Carya illinoinensis HOM05D006195 ORTHO05D007710 8.6e-57 224.2 216 56.0
Actinidia24060 Actinidia chinensis HOM05D006195 ORTHO05D007710 3.3e-56 222.2 220 58.6
Gohir.A05G165600 Gossypium hirsutum HOM05D006195 ORTHO05D007710 3.3e-56 222.2 222 54.5
Gorai.009G173800 Gossypium raimondii HOM05D006195 ORTHO05D007710 1.6e-55 219.9 216 55.1
Thecc.06G199000 Theobroma cacao HOM05D006195 ORTHO05D007710 2.1e-55 219.5 217 54.4
Gohir.D05G168600 Gossypium hirsutum HOM05D006195 ORTHO05D007710 2.8e-55 219.2 216 54.6
QL04p018330 Quercus lobata HOM05D006195 ORTHO05D007710 4.7e-55 218.4 199 57.8
Duzib235G1322 Durio zibethinus HOM05D006195 ORTHO05D007710 6.1e-55 218.0 216 56.5
TAR629G3096 Trochodendron aralioides HOM05D006195 ORTHO05D007710 8.0e-55 217.6 218 56.0
Prupe.4G036600 Prunus persica HOM05D006195 ORTHO05D007710 1.0e-54 217.2 220 56.4
Ciclev10015313m.g Citrus clementina HOM05D006195 ORTHO05D007710 1.8e-54 216.5 224 54.0
MELO3C002557.2 Cucumis melo HOM05D006195 ORTHO05D007710 4.0e-54 215.3 189 61.9
Solyc02g079110.3 Solanum lycopersicum HOM05D006195 ORTHO05D007710 8.9e-54 214.2 215 54.9
Rhsim02G0120000 Rhododendron simsii HOM05D006195 ORTHO05D007710 1.2e-53 213.8 239 54.0
Sed0022279 Sechium edule HOM05D006195 ORTHO05D007710 1.2e-53 213.8 213 55.9
ClCG03G005530 Citrullus lanatus HOM05D006195 ORTHO05D007710 2.0e-53 213.0 214 56.1
Sopen02g023920 Solanum pennellii HOM05D006195 ORTHO05D007710 2.0e-53 213.0 215 54.9
Nitab4.5_0009994g0040 Nicotiana tabacum HOM05D006195 ORTHO05D007710 7.5e-53 211.1 232 53.9
CsaV3_1G011800 Cucumis sativus L. HOM05D006195 ORTHO05D007710 1.3e-52 210.3 213 54.5
Cpa.g.sc27.120 Carica papaya HOM05D006195 ORTHO05D007710 1.7e-52 209.9 229 50.7
PGSC0003DMG400022408 Solanum tuberosum HOM05D006195 ORTHO05D007710 4.9e-52 208.4 215 54.4
COL.COLO4_31584 Corchorus olitorius HOM05D006195 ORTHO05D007710 8.3e-52 207.6 224 53.1
Haze_06571 Corylus avellana HOM05D006195 ORTHO05D007710 8.3e-52 207.6 218 55.5
Lj2A280G38 Lonicera japonica HOM05D006195 ORTHO05D007710 1.1e-51 207.2 256 51.2
Cc02_g12450 Coffea canephora HOM05D006195 ORTHO05D007710 1.4e-51 206.8 236 50.8
FvH4_3g04030 Fragaria vesca HOM05D006195 ORTHO05D007710 1.4e-51 206.8 217 55.8
DCAR_008069 Daucus carota HOM05D006195 ORTHO05D007710 1.8e-51 206.5 223 53.4
RcHm_v2.0_Chr5g0006371 Rosa chinensis HOM05D006195 ORTHO05D007710 3.2e-51 205.7 225 55.1
FAN11G1039 Fragaria x ananassa HOM05D006195 ORTHO05D007710 9.2e-51 204.1 221 54.8
Atru.chr10.2006 Acer truncatum HOM05D006195 ORTHO05D007710 1.6e-50 203.4 214 51.9
EL10Ac8g20527 Beta vulgaris HOM05D006195 ORTHO05D007710 3.5e-50 202.2 194 53.1
MD10G1303200 Malus domestica HOM05D006195 ORTHO05D007710 3.5e-50 202.2 204 54.9
Potri.011G043000 Populus trichocarpa HOM05D006195 ORTHO05D007710 4.6e-50 201.8 196 56.6
vmacro15867 Vaccinium macrocarpon HOM05D006195 ORTHO05D007710 4.6e-50 201.8 202 55.9
CANSAT56G3748 Cannabis sativa HOM05D006195 ORTHO05D007710 5.9e-50 201.4 217 53.0
Lsat_1_v5_gn_7_19641 Lactuca sativa HOM05D006195 ORTHO05D007710 1.0e-49 200.7 224 53.6
Oeu038214.1 Olea europaea HOM05D006195 ORTHO05D007710 3.0e-49 199.1 223 52.9
AUR62016899 Chenopodium quinoa HOM05D006195 ORTHO05D007710 3.9e-49 198.7 224 49.1
FAN25G3765 Fragaria x ananassa HOM05D006195 ORTHO05D007710 3.9e-49 198.7 215 54.0
Peaxi162Scf00355g00914 Petunia axillaris HOM05D006195 ORTHO05D007710 5.0e-49 198.4 195 54.9
TWI38G0511 Tripterygium wilfordii HOM05D006195 ORTHO05D007710 6.6e-49 198.0 218 53.7
TPR.G32422 Trifolium pratense HOM05D006195 ORTHO05D007710 1.1e-48 197.2 194 55.7
Aqoxy1G02740 Aquilegia oxysepala HOM05D006195 ORTHO05D007710 4.3e-48 195.3 196 55.1
THA.LOC104806275 Tarenaya hassleriana HOM05D006195 ORTHO05D007710 4.3e-48 195.3 194 54.1
FAN21G3429 Fragaria x ananassa HOM05D006195 ORTHO05D007710 5.6e-48 194.9 228 52.2
MBI14_g15641_MAGBIO Magnolia biondii HOM05D006195 ORTHO05D007710 5.6e-48 194.9 220 51.4
Eucgr.E03701 Eucalyptus grandis HOM05D006195 ORTHO05D007710 7.3e-48 194.5 217 51.6
VMungo0251G2515 Vigna mungo HOM05D006195 ORTHO05D007710 7.3e-48 194.5 214 53.7
HanXRQChr14g0437281 Helianthus annuus HOM05D006195 ORTHO05D007710 9.5e-48 194.1 204 52.0
AT4G21520 Arabidopsis thaliana HOM05D006195 ORTHO05D007710 1.2e-47 193.7 217 53.0
PSO675G1294 Papaver somniferum HOM05D006195 ORTHO05D007710 1.6e-47 193.4 212 50.0
Carub.0007s1990 Capsella rubella HOM05D006195 ORTHO05D007710 4.7e-47 191.8 217 51.6
AL7G32530 Arabidopsis lyrata HOM05D006195 ORTHO05D007710 6.2e-47 191.4 217 52.5
arahy.Tifrunner.gnm1.ann1.HDHM3Z Arachis hypogaea HOM05D006195 ORTHO05D007710 6.2e-47 191.4 216 51.4
Lalb_Chr09g0327371 Lupinus albus HOM05D006195 ORTHO05D007710 6.2e-47 191.4 214 51.9
PGR042G1193 Punica granatum HOM05D006195 ORTHO05D007710 6.2e-47 191.4 226 48.2
Ah.14g088920 Amaranthus hybridus HOM05D006195 ORTHO05D007710 1.8e-46 189.9 217 49.3
arahy.Tifrunner.gnm1.ann1.IWY5CJ Arachis hypogaea HOM05D006195 ORTHO05D007710 1.8e-46 189.9 216 51.4
CARHR228180 Cardamine hirsuta HOM05D006195 ORTHO05D007710 1.8e-46 189.9 217 51.6
Phvul.002G222200 Phaseolus vulgaris HOM05D006195 ORTHO05D007710 1.8e-46 189.9 192 54.2
Ca_18483_v3 Cicer arietinum L. HOM05D006195 ORTHO05D007710 3.1e-46 189.1 239 46.4
Sc17g0006620 Simmondsia chinensis HOM05D006195 ORTHO05D007710 3.1e-46 189.1 201 53.7
Medtr4g091080 Medicago truncatula HOM05D006195 ORTHO05D007710 5.2e-46 188.3 215 52.1
MD05G1325300 Malus domestica HOM05D006195 ORTHO05D007710 8.9e-46 187.6 227 51.5
Thhalv10025271m.g Eutrema salsugineum HOM05D006195 ORTHO05D007710 1.2e-45 187.2 217 52.1
Lj4g0017156 Lotus japonicus HOM05D006195 ORTHO05D007710 1.2e-45 187.2 194 53.6
BcaNung02791 Brassica carinata HOM05D006195 ORTHO05D007710 2.0e-45 186.4 217 49.3
Migut.I00196 Erythranthe guttata HOM05D006195 ORTHO05D007710 2.0e-45 186.4 218 50.5
Aa31LG6G3540 Aethionema arabicum HOM05D006195 ORTHO05D007710 2.6e-45 186.0 216 50.5
Migut.M01211 Erythranthe guttata HOM05D006195 ORTHO05D007710 2.6e-45 186.0 218 50.0
Manes.17G039200 Manihot esculenta HOM05D006195 ORTHO05D007710 2.6e-45 186.0 217 51.2
Sp7g19630 Schrenkiella parvula HOM05D006195 ORTHO05D007710 2.6e-45 186.0 217 49.8
Eucgr.L01396 Eucalyptus grandis HOM05D006195 ORTHO05D007710 4.4e-45 185.3 215 49.8
SGA_v2.0_scaffold7G03951 Striga asiatica HOM05D006195 ORTHO05D007710 7.5e-45 184.5 218 48.6
Cfa000355 Carpinus fangiana HOM05D006195 ORTHO05D007710 9.8e-45 184.1 202 55.4
C01p15450 Brassica napus HOM05D006195 ORTHO05D007710 1.3e-44 183.7 217 50.2
BolC1t01499H Brassica oleracea HOM05D006195 ORTHO05D007710 1.3e-44 183.7 217 50.2
SalBow8G2471 Salvia bowleyana HOM05D006195 ORTHO05D007710 1.7e-44 183.3 191 51.3
Glyma.07G190200 Glycine max HOM05D006195 ORTHO05D007710 2.2e-44 183.0 228 49.6
A01p12830 Brassica napus HOM05D006195 ORTHO05D007710 4.9e-44 181.8 219 49.8
BraA01t01227Z Brassica rapa HOM05D006195 ORTHO05D007710 6.4e-44 181.4 224 49.6
ATR0693G097 Amborella trichopoda HOM05D006195 ORTHO05D007710 8.3e-44 181.0 219 47.0
Psat7g108560 Pisum sativum HOM05D006195 ORTHO05D007710 2.4e-43 179.5 216 49.1
Pp3c6_22670 Physcomitrium patens HOM05D006195 ORTHO05D007710 4.6e-42 175.3 198 49.5
MSTRG.8639 Avicennia marina HOM05D006195 ORTHO05D007710 1.0e-41 174.1 222 47.7
ECA236G2696 Erigeron canadensis HOM05D006195 ORTHO05D007710 1.6e-39 166.8 169 54.4
unitig_37.g12337 Utricularia gibba HOM05D006195 ORTHO05D007710 4.7e-39 165.2 169 53.8
Sabra11G0029600 Salix brachista HOM05D006195 ORTHO05D001726 1.8e-38 163.3 132 62.9
HPP92_018057 Vanilla planifolia HOM05D006195 ORTHO05D007710 3.4e-37 159.1 208 47.1
Nitab4.5_0003834g0010 Nicotiana tabacum HOM05D006195 ORTHO05D007710 5.8e-37 158.3 87 83.9
Os03g0738000 Oryza sativa ssp. japonica HOM05D006195 ORTHO05D007710 6.4e-36 154.8 193 47.7
CSS0049192 Camellia sinensis var. sinensis HOM05D006195 ORTHO05D007710 2.4e-35 152.9 99 70.7
AUR62014719 Chenopodium quinoa HOM05D006195 ORTHO05D007710 2.4e-35 152.9 191 49.2
Zm00001eb056530 Zea mays HOM05D006195 ORTHO05D007710 3.2e-35 152.5 195 46.2
TPR.G37128 Trifolium pratense HOM05D006195 ORTHO05D007710 1.0e-33 147.5 94 72.3
Mapoly0082s0056 Marchantia polymorpha HOM05D006195 ORTHO05D007710 1.7e-33 146.7 206 39.8
AagrBONN_evm.TU.Sc2ySwM_344.4192 Anthoceros agrestis HOM05D006195 ORTHO05D007710 5.6e-32 141.7 207 42.0
CDE11G0466 Ceratophyllum demersum HOM05D006195 ORTHO05D007710 2.8e-31 139.4 131 56.5
SMO137G0351 Selaginella moellendorffii HOM05D006195 ORTHO05D007710 1.4e-30 137.1 191 41.4
Hund23609 Selenicereus undatus HOM05D006195 ORTHO05D007710 7.8e-26 121.3 67 83.6
CBR_g41455 Chara braunii HOM05D006195 ORTHO05D007710 1.2e-23 114.0 92 59.8
CBR_g20417 Chara braunii HOM05D006195 ORTHO05D007710 4.7e-23 112.1 92 58.7
MBI14_g13652_MAGBIO Magnolia biondii HOM05D006195 ORTHO05D007710 2.4e-22 109.8 202 39.1
Nitab4.5_0000190g0110 Nicotiana tabacum HOM05D006195 ORTHO05D007710 2.4e-22 109.8 133 45.9
Potri.004G034600 Populus trichocarpa HOM05D006195 ORTHO05D007710 2.4e-22 109.8 174 41.4
SMO116G0485 Selaginella moellendorffii HOM05D006195 ORTHO05D007710 2.1e-18 96.7 74 55.4
HPP92_018063 Vanilla planifolia HOM05D006195 ORTHO05D007710 1.7e-17 93.6 122 45.9
Cre07.g326350 Chlamydomonas reinhardtii HOM05D006195 ORTHO05D007710 2.3e-17 93.2 84 51.2
Manes.10G084901 Manihot esculenta HOM05D006195 ORTHO05D007710 3.9e-17 92.4 63 71.4
MCO07G204 Micromonas commoda HOM05D006195 ORTHO05D007710 2.5e-16 89.7 86 48.8
SEGI_17138 Sequoiadendron giganteum HOM05D006195 ORTHO05D007710 1.6e-15 87.0 59 64.4
SalBow1G5137 Salvia bowleyana HOM05D006195 ORTHO05D007710 5.6e-08 62.0 36 66.7
SalBow6G2099 Salvia bowleyana HOM05D006195 ORTHO05D007710 5.6e-08 62.0 36 66.7
SalBow6G4337 Salvia bowleyana HOM05D006195 ORTHO05D007710 5.6e-08 62.0 36 66.7
SHI02125 Sapria himalayana HOM05D006195 ORTHO05D007710 5.6e-08 62.0 59 45.8
Nn1g03899 Nelumbo nucifera HOM05D006195 ORTHO05D007710 9.6e-08 61.2 102 40.2


User provided reference genes

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