Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv18987 Davidia involucrata HOM05D007536 ORTHO05D009390 4.4e-105 386.3 187 100.0
Dinv24676 Davidia involucrata HOM05D007536 ORTHO05D009390 4.7e-67 260.0 142 86.6
CSS0008501 Camellia sinensis var. sinensis HOM05D007536 ORTHO05D009390 1.3e-59 235.3 188 64.9
Hma1.2p1_2103F.1_g314080 Hydrangea macrophylla HOM05D007536 ORTHO05D009390 1.0e-53 215.7 186 58.1
Lj2C43T1 Lonicera japonica HOM05D007536 ORTHO05D009390 3.8e-48 197.2 188 55.9
GSVIVG01023504001 Vitis vinifera HOM05D007536 ORTHO05D009390 1.1e-47 195.7 188 57.4
TAR636G1433 Trochodendron aralioides HOM05D007536 ORTHO05D009390 9.6e-44 182.6 188 50.5
QL03p030462 Quercus lobata HOM05D007536 ORTHO05D009390 5.3e-42 176.8 185 52.4
Atru.chr2.985 Acer truncatum HOM05D007536 ORTHO05D009390 1.0e-40 172.6 187 48.1
CiPaw.15G107000 Carya illinoinensis HOM05D007536 ORTHO05D009390 4.9e-40 170.2 190 49.5
Haze_04425 Corylus avellana HOM05D007536 ORTHO05D009390 6.5e-40 169.9 188 48.4
TAR362G0895 Trochodendron aralioides HOM05D007536 ORTHO05D009390 2.1e-38 164.9 188 44.7
vmacro10366 Vaccinium macrocarpon HOM05D007536 ORTHO05D009390 4.6e-38 163.7 192 50.5
Cpa.g.sc162.41 Carica papaya HOM05D007536 ORTHO05D009390 7.9e-38 162.9 171 52.6
Rhsim09G0137000 Rhododendron simsii HOM05D007536 ORTHO05D009390 3.3e-36 157.5 194 50.0
Manes.08G053700 Manihot esculenta HOM05D007536 ORTHO05D009390 7.4e-36 156.4 188 46.8
FAN09G4642 Fragaria x ananassa HOM05D007536 ORTHO05D009390 1.3e-35 155.6 187 47.6
RcHm_v2.0_Chr3g0449641 Rosa chinensis HOM05D007536 ORTHO05D009390 3.7e-35 154.1 187 47.1
Thecc.05G270900 Theobroma cacao HOM05D007536 ORTHO05D009390 3.7e-35 154.1 185 48.1
Ciclev10019470m.g Citrus clementina HOM05D007536 ORTHO05D009390 8.2e-35 152.9 152 54.6
FAN14G0137 Fragaria x ananassa HOM05D007536 ORTHO05D009390 8.2e-35 152.9 185 47.0
FAN05G1587 Fragaria x ananassa HOM05D007536 ORTHO05D009390 2.4e-34 151.4 132 56.1
ClCG03G009740 Citrullus lanatus HOM05D007536 ORTHO05D009390 3.1e-34 151.0 192 43.2
FvH4_6g01910 Fragaria vesca HOM05D007536 ORTHO05D009390 6.9e-34 149.8 185 46.5
Nn1g02810 Nelumbo nucifera HOM05D007536 ORTHO05D009390 1.2e-33 149.1 188 45.2
MSTRG.10543 Avicennia marina HOM05D007536 ORTHO05D009390 2.6e-33 147.9 187 44.4
MD04G1230200 Malus domestica HOM05D007536 ORTHO05D009390 4.5e-33 147.1 184 46.7
Oeu000315.1 Olea europaea HOM05D007536 ORTHO05D009390 4.5e-33 147.1 187 44.9
Prupe.6G350100 Prunus persica HOM05D007536 ORTHO05D009390 5.9e-33 146.7 184 46.2
Migut.L01514 Erythranthe guttata HOM05D007536 ORTHO05D009390 1.7e-32 145.2 190 43.7
MELO3C010129.2 Cucumis melo HOM05D007536 ORTHO05D009390 2.9e-32 144.4 192 42.2
Cc02_g08820 Coffea canephora HOM05D007536 ORTHO05D009390 5.0e-32 143.7 183 45.4
Glyma.20G222900 Glycine max HOM05D007536 ORTHO05D009390 1.1e-31 142.5 194 41.8
Gohir.D11G257700 Gossypium hirsutum HOM05D007536 ORTHO05D009390 1.4e-31 142.1 190 46.8
Gorai.007G276000 Gossypium raimondii HOM05D007536 ORTHO05D009390 1.4e-31 142.1 190 46.8
Gohir.D13G172800 Gossypium hirsutum HOM05D007536 ORTHO05D009390 3.2e-31 141.0 183 46.4
Gohir.A13G167300 Gossypium hirsutum HOM05D007536 ORTHO05D009390 4.2e-31 140.6 183 46.4
Gorai.013G187800 Gossypium raimondii HOM05D007536 ORTHO05D009390 4.2e-31 140.6 183 46.4
Sed0012628 Sechium edule HOM05D007536 ORTHO05D009390 9.3e-31 139.4 192 41.1
COL.COLO4_15481 Corchorus olitorius HOM05D007536 ORTHO05D009390 2.3e-29 134.8 185 42.7
FAN05G2252 Fragaria x ananassa HOM05D007536 ORTHO05D009390 3.0e-29 134.4 113 57.5
Gohir.A11G247400 Gossypium hirsutum HOM05D007536 ORTHO05D009390 3.0e-29 134.4 193 44.6
Sabra19G0031900 Salix brachista HOM05D007536 ORTHO05D009390 3.0e-29 134.4 179 43.0
FAN14G3895 Fragaria x ananassa HOM05D007536 ORTHO05D009390 3.9e-29 134.0 113 57.5
TWI38G0843 Tripterygium wilfordii HOM05D007536 ORTHO05D009390 3.9e-29 134.0 188 41.5
Duzib177G0261 Durio zibethinus HOM05D007536 ORTHO05D009390 6.7e-29 133.3 186 44.1
CsaV3_1G045080 Cucumis sativus L. HOM05D007536 ORTHO05D009390 8.7e-29 132.9 197 41.1
Peaxi162Scf00528g00022 Petunia axillaris HOM05D007536 ORTHO05D009390 1.1e-28 132.5 194 45.4
Potri.019G019200 Populus trichocarpa HOM05D007536 ORTHO05D009390 3.3e-28 131.0 180 42.8
Sp1g07270 Schrenkiella parvula HOM05D007536 ORTHO05D009390 4.3e-28 130.6 137 48.2
Sed0002849 Sechium edule HOM05D007536 ORTHO05D009390 4.3e-28 130.6 190 38.9
Sopen04g005180 Solanum pennellii HOM05D007536 ORTHO05D009390 5.7e-28 130.2 185 45.4
MBI10_g13809_MAGBIO Magnolia biondii HOM05D007536 ORTHO05D009390 1.6e-27 128.6 143 49.0
Solyc04g010050.4 Solanum lycopersicum HOM05D007536 ORTHO05D009390 3.7e-27 127.5 148 50.7
Nitab4.5_0003780g0060 Nicotiana tabacum HOM05D007536 ORTHO05D009390 4.8e-27 127.1 188 43.6
Nitab4.5_0006737g0040 Nicotiana tabacum HOM05D007536 ORTHO05D009390 4.8e-27 127.1 186 43.5
CANSAT54G0748 Cannabis sativa HOM05D007536 ORTHO05D009390 8.2e-27 126.3 173 43.4
COL.COLO4_15479 Corchorus olitorius HOM05D007536 ORTHO05D009390 1.1e-26 125.9 183 39.9
Ah.04g163100 Amaranthus hybridus HOM05D007536 ORTHO05D009390 1.4e-26 125.6 184 44.0
Aqoxy5G00211 Aquilegia oxysepala HOM05D007536 ORTHO05D009390 9.1e-26 122.9 174 43.7
Eucgr.B02149 Eucalyptus grandis HOM05D007536 ORTHO05D009390 1.2e-25 122.5 188 40.4
Carub.0001s0797 Capsella rubella HOM05D007536 ORTHO05D009390 2.0e-25 121.7 137 46.7
DCAR_023085 Daucus carota HOM05D007536 ORTHO05D009390 2.0e-25 121.7 184 38.6
THA.LOC104821264 Tarenaya hassleriana HOM05D007536 ORTHO05D009390 2.6e-25 121.3 137 48.2
Thhalv10007213m.g Eutrema salsugineum HOM05D007536 ORTHO05D009390 4.5e-25 120.6 136 42.6
CAN.G358.142 Capsicum annuum HOM05D007536 ORTHO05D009390 5.9e-25 120.2 188 43.1
PSO210G0145 Papaver somniferum HOM05D007536 ORTHO05D009390 5.0e-24 117.1 126 46.8
AT1G08610 Arabidopsis thaliana HOM05D007536 ORTHO05D009390 1.1e-23 115.9 136 45.6
CARHR008520 Cardamine hirsuta HOM05D007536 ORTHO05D009390 3.2e-23 114.4 134 43.3
Sc20g0000630 Simmondsia chinensis HOM05D007536 ORTHO05D009390 3.2e-23 114.4 182 39.0
Actinidia34755 Actinidia chinensis HOM05D007536 ORTHO05D009390 9.4e-23 112.8 81 65.4
Phvul.008G151830 Phaseolus vulgaris HOM05D007536 ORTHO05D009390 1.2e-22 112.5 192 38.5
Aa31LG11G11200 Aethionema arabicum HOM05D007536 ORTHO05D009390 2.1e-22 111.7 137 44.5
AL1G19040 Arabidopsis lyrata HOM05D007536 ORTHO05D009390 3.6e-22 110.9 182 37.4
Ca_10014_v3 Cicer arietinum L. HOM05D007536 ORTHO05D009390 3.0e-21 107.8 134 45.5
AUR62004838 Chenopodium quinoa HOM05D007536 ORTHO05D009390 3.9e-21 107.5 189 38.1
Lalb_Chr02g0149121 Lupinus albus HOM05D007536 ORTHO05D009390 1.1e-20 105.9 194 38.1
PGR142G0030 Punica granatum HOM05D007536 ORTHO05D009390 2.6e-20 104.8 185 38.9
VMungo0720G1101 Vigna mungo HOM05D007536 ORTHO05D009390 4.4e-20 104.0 193 36.8
TPR.G22324 Trifolium pratense HOM05D007536 ORTHO05D009390 5.7e-20 103.6 190 36.8
CDE04G1469 Ceratophyllum demersum HOM05D007536 ORTHO05D009390 1.3e-19 102.4 171 38.0
AUR62040928 Chenopodium quinoa HOM05D007536 ORTHO05D009390 2.8e-19 101.3 185 38.4
Medtr1g080120 Medicago truncatula HOM05D007536 ORTHO05D009390 6.3e-19 100.1 126 44.4
Lj5g0027095 Lotus japonicus HOM05D007536 ORTHO05D009390 1.8e-18 98.6 115 46.1
FAN02G3965 Fragaria x ananassa HOM05D007536 ORTHO05D009390 6.9e-18 96.7 74 63.5
MBI07_g16910_MAGBIO Magnolia biondii HOM05D007536 ORTHO05D009390 6.9e-18 96.7 141 37.6
Lsat_1_v5_gn_8_24901 Lactuca sativa HOM05D007536 ORTHO05D009390 1.2e-17 95.9 171 36.3
Psat6g142640 Pisum sativum HOM05D007536 ORTHO05D009390 5.0e-16 90.5 190 35.3
C08p49910 Brassica napus HOM05D007536 ORTHO05D009390 6.5e-16 90.1 64 57.8
A09p65820 Brassica napus HOM05D007536 ORTHO05D009390 1.1e-15 89.4 60 61.7
BcaC07g41933 Brassica carinata HOM05D007536 ORTHO05D009390 1.4e-15 89.0 60 60.0
BolC8t52519H Brassica oleracea HOM05D007536 ORTHO05D009390 1.4e-15 89.0 60 60.0
BraA09t41926Z Brassica rapa HOM05D007536 ORTHO05D009390 4.2e-15 87.4 60 60.0
Lalb_Chr21g0311181 Lupinus albus HOM05D007536 ORTHO05D009390 2.1e-14 85.1 188 35.6
SalBow1G3025 Salvia bowleyana HOM05D007536 ORTHO05D009390 6.1e-14 83.6 60 63.3
ECA233G3269 Erigeron canadensis HOM05D007536 ORTHO05D009390 8.8e-13 79.7 153 37.3
HanXRQChr07g0204491 Helianthus annuus HOM05D007536 ORTHO05D009390 1.3e-11 75.9 166 30.7
ATR0736G097 Amborella trichopoda HOM05D007536 ORTHO05D009390 2.2e-11 75.1 55 58.2
SGA_v2.0_scaffold21G09411 Striga asiatica HOM05D005874 ORTHO05D007206 3.2e-07 61.2 46 52.2


User provided reference genes

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