Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv18952 Davidia involucrata HOM05D005409 ORTHO05D006456 0.0e+00 1262.7 650 100.0
Hma1.2p1_0809F.1_g221770 Hydrangea macrophylla HOM05D005409 ORTHO05D006456 1.2e-209 733.8 667 65.1
Actinidia11830 Actinidia chinensis HOM05D005409 ORTHO05D006456 5.5e-204 714.9 659 63.1
Nitab4.5_0006456g0010 Nicotiana tabacum HOM05D005409 ORTHO05D006456 1.7e-192 676.8 661 58.9
Lj2A276T57 Lonicera japonica HOM05D005409 ORTHO05D006456 1.1e-191 674.1 673 58.5
Nitab4.5_0000503g0080 Nicotiana tabacum HOM05D005409 ORTHO05D006456 2.4e-191 672.9 661 59.3
TAR624G1144 Trochodendron aralioides HOM05D005409 ORTHO05D006456 2.4e-191 672.9 669 58.1
Solyc02g079880.3 Solanum lycopersicum HOM05D005409 ORTHO05D006456 3.1e-191 672.5 662 58.2
Prupe.4G030000 Prunus persica HOM05D005409 ORTHO05D006456 5.4e-191 671.8 656 58.1
PGSC0003DMG400021722 Solanum tuberosum HOM05D005409 ORTHO05D006456 5.4e-191 671.8 663 58.2
Sopen02g024640 Solanum pennellii HOM05D005409 ORTHO05D006456 1.9e-188 663.3 665 57.6
Cc02_g11840 Coffea canephora HOM05D005409 ORTHO05D006456 7.3e-188 661.4 664 57.4
Cfa016400 Carpinus fangiana HOM05D005409 ORTHO05D006456 2.9e-184 649.4 664 57.7
Peaxi162Scf00759g00211 Petunia axillaris HOM05D005409 ORTHO05D006456 6.4e-184 648.3 661 58.2
CiPaw.10G113200 Carya illinoinensis HOM05D005409 ORTHO05D006456 4.1e-183 645.6 663 56.6
Duzib192G0995 Durio zibethinus HOM05D005409 ORTHO05D006456 9.2e-183 644.4 662 55.7
MD05G1335400 Malus domestica HOM05D005409 ORTHO05D006456 2.3e-181 639.8 655 56.3
Rhsim02G0115600 Rhododendron simsii HOM05D005409 ORTHO05D006456 2.5e-180 636.3 703 56.8
Nn1g06923 Nelumbo nucifera HOM05D005409 ORTHO05D006456 5.6e-180 635.2 664 56.6
Hma1.2p1_0809F.1_g221760 Hydrangea macrophylla HOM05D005409 ORTHO05D006456 1.2e-179 634.0 552 66.1
vmacro15844 Vaccinium macrocarpon HOM05D005409 ORTHO05D006456 1.4e-178 630.6 679 56.3
MD10G1310800 Malus domestica HOM05D005409 ORTHO05D006456 6.8e-178 628.2 660 56.2
QL05p077347 Quercus lobata HOM05D005409 ORTHO05D006456 2.0e-177 626.7 711 53.2
Manes.17G030300 Manihot esculenta HOM05D005409 ORTHO05D006456 9.8e-177 624.4 660 54.8
Thecc.06G207400 Theobroma cacao HOM05D005409 ORTHO05D006456 1.7e-176 623.6 661 54.8
TAR626G0140 Trochodendron aralioides HOM05D005409 ORTHO05D006456 1.7e-176 623.6 667 56.1
Duzib235G0390 Durio zibethinus HOM05D005409 ORTHO05D006456 6.4e-176 621.7 674 53.6
Ciclev10014614m.g Citrus clementina HOM05D005409 ORTHO05D006456 2.1e-174 616.7 658 54.3
Phvul.002G218900 Phaseolus vulgaris HOM05D005409 ORTHO05D006456 6.0e-174 615.1 662 54.7
Glyma.07G187300 Glycine max HOM05D005409 ORTHO05D006456 1.3e-173 614.0 661 54.5
Lj1A1221T57 Lonicera japonica HOM05D005409 ORTHO05D006456 8.6e-173 611.3 658 55.9
Gohir.D09G070300 Gossypium hirsutum HOM05D005409 ORTHO05D006456 7.3e-172 608.2 662 53.5
Gorai.006G084700 Gossypium raimondii HOM05D005409 ORTHO05D006456 8.1e-171 604.7 669 53.1
Oeu016146.1 Olea europaea HOM05D005409 ORTHO05D006456 1.1e-170 604.4 660 55.6
CiPaw.10G113100 Carya illinoinensis HOM05D005409 ORTHO05D006456 2.3e-170 603.2 663 54.9
FAN25G1204 Fragaria x ananassa HOM05D005409 ORTHO05D006456 3.1e-170 602.8 696 52.9
Lj4g0002185 Lotus japonicus HOM05D005409 ORTHO05D006456 3.1e-170 602.8 660 54.4
MSTRG.15953 Avicennia marina HOM05D005409 ORTHO05D006456 6.8e-170 601.7 663 55.7
VMungo0251G1750 Vigna mungo HOM05D005409 ORTHO05D006456 1.5e-169 600.5 669 53.4
COL.COLO4_33645 Corchorus olitorius HOM05D005409 ORTHO05D006456 3.4e-169 599.4 660 53.9
Glyma.08G061800 Glycine max HOM05D005409 ORTHO05D006456 5.8e-169 598.6 662 53.8
Gohir.A10G017200 Gossypium hirsutum HOM05D005409 ORTHO05D006456 1.3e-168 597.4 658 54.1
Gohir.A09G070200 Gossypium hirsutum HOM05D005409 ORTHO05D006456 4.1e-167 592.4 661 52.8
Gohir.D10G017400 Gossypium hirsutum HOM05D005409 ORTHO05D006456 1.6e-166 590.5 659 53.7
Gorai.011G019300 Gossypium raimondii HOM05D005409 ORTHO05D006456 1.6e-166 590.5 659 53.7
TWI63G1109 Tripterygium wilfordii HOM05D005409 ORTHO05D006456 2.3e-165 586.6 674 52.4
CsaV3_1G011380 Cucumis sativus L. HOM05D005409 ORTHO05D006456 2.0e-161 573.5 658 53.3
ClCG03G005190 Citrullus lanatus HOM05D005409 ORTHO05D006456 4.9e-160 568.9 657 52.7
Actinidia26760 Actinidia chinensis HOM05D005409 ORTHO05D006456 1.1e-159 567.8 540 61.3
CANSAT35G0463 Cannabis sativa HOM05D005409 ORTHO05D006456 3.5e-158 562.8 657 52.7
Sc17g0006920 Simmondsia chinensis HOM05D005409 ORTHO05D006456 3.0e-157 559.7 661 51.6
MELO3C002515.2 Cucumis melo HOM05D005409 ORTHO05D006456 1.1e-156 557.8 657 52.7
ECA236G3644 Erigeron canadensis HOM05D005409 ORTHO05D006456 1.3e-152 544.3 662 52.6
Ca_18454_v3 Cicer arietinum L. HOM05D005409 ORTHO05D006456 2.9e-152 543.1 665 51.7
Lalb_Chr09g0327161 Lupinus albus HOM05D005409 ORTHO05D006456 1.4e-151 540.8 659 51.7
GSVIVG01006401001 Vitis vinifera HOM05D005409 ORTHO05D006456 5.4e-151 538.9 683 49.3
Hund23539 Selenicereus undatus HOM05D005409 ORTHO05D006456 3.5e-150 536.2 669 49.3
Actinidia24044 Actinidia chinensis HOM05D005409 ORTHO05D006456 3.0e-149 533.1 511 59.9
Sed0006411 Sechium edule HOM05D005409 ORTHO05D006456 8.7e-149 531.6 658 51.1
Lalb_Chr16g0383301 Lupinus albus HOM05D005409 ORTHO05D006456 1.5e-148 530.8 658 50.3
Migut.M01258 Erythranthe guttata HOM05D005409 ORTHO05D006456 2.1e-147 526.9 660 52.3
Oeu050809.4 Olea europaea HOM05D005409 ORTHO05D006456 1.4e-146 524.2 681 48.6
DCAR_008109 Daucus carota HOM05D005409 ORTHO05D006456 6.9e-146 521.9 658 51.2
CSS0017238 Camellia sinensis var. sinensis HOM05D005409 ORTHO05D006456 9.0e-146 521.5 661 51.9
Psat0s935g0040 Pisum sativum HOM05D005409 ORTHO05D006456 2.0e-145 520.4 667 50.2
HanXRQChr15g0482781 Helianthus annuus HOM05D005409 ORTHO05D006456 3.5e-142 509.6 661 51.1
Medtr4g092050 Medicago truncatula HOM05D005409 ORTHO05D006456 1.0e-141 508.1 669 49.6
TPR.G13934 Trifolium pratense HOM05D005409 ORTHO05D006456 2.5e-140 503.4 672 49.7
Potri.011G031900 Populus trichocarpa HOM05D005409 ORTHO05D006456 2.8e-139 500.0 660 48.2
HanXRQChr15g0482771 Helianthus annuus HOM05D005409 ORTHO05D006456 3.1e-138 496.5 661 50.7
EL10As6g23684 Beta vulgaris HOM05D005409 ORTHO05D006456 2.6e-137 493.4 684 46.8
Aqoxy1G03830 Aquilegia oxysepala HOM05D005409 ORTHO05D006456 1.3e-136 491.1 710 46.5
DCAR_004174 Daucus carota HOM05D005409 ORTHO05D006456 3.2e-135 486.5 646 50.9
AUR62012574 Chenopodium quinoa HOM05D005409 ORTHO05D006456 7.9e-134 481.9 680 46.5
AUR62014626 Chenopodium quinoa HOM05D005409 ORTHO05D006456 6.7e-133 478.8 680 46.3
Eucgr.E03596 Eucalyptus grandis HOM05D005409 ORTHO05D006456 1.4e-130 471.1 569 49.4
PSO675G2591 Papaver somniferum HOM05D005409 ORTHO05D006456 2.6e-129 466.8 683 48.8
TWI38G0167 Tripterygium wilfordii HOM05D005409 ORTHO05D006456 4.5e-129 466.1 618 48.7
Lsat_1_v5_gn_7_18380 Lactuca sativa HOM05D005409 ORTHO05D006456 1.0e-128 464.9 666 48.0
PSO541G2946 Papaver somniferum HOM05D005409 ORTHO05D006456 1.0e-128 464.9 683 48.3
PGR042G2399 Punica granatum HOM05D005409 ORTHO05D006456 4.2e-127 459.5 662 46.1
Sabra11G0025100 Salix brachista HOM05D005409 ORTHO05D006456 1.2e-126 458.0 658 45.6
Ah.14g088510 Amaranthus hybridus HOM05D005409 ORTHO05D006456 1.6e-126 457.6 683 44.9
Actinidia26959 Actinidia chinensis HOM05D005409 ORTHO05D006456 7.9e-126 455.3 479 58.5
MBI02_g26225_MAGBIO Magnolia biondii HOM05D005409 ORTHO05D006456 9.0e-122 441.8 685 45.7
Haze_06671 Corylus avellana HOM05D005409 ORTHO05D006456 1.0e-120 438.3 469 54.8
FvH4_3g03030 Fragaria vesca HOM05D005409 ORTHO05D006456 5.1e-117 426.0 522 49.8
Sabra11G0019200 Salix brachista HOM05D005409 ORTHO05D006456 1.4e-114 417.9 658 43.2
Cpa.g.sc81.2 Carica papaya HOM05D005409 ORTHO05D006456 5.3e-114 416.0 465 53.1
GSVIVG01030650001 Vitis vinifera HOM05D005409 ORTHO05D006456 5.1e-109 399.4 659 42.8
Potri.007G119200 Populus trichocarpa HOM05D005409 ORTHO05D006456 1.3e-107 394.8 670 42.8
SalBow8G4343 Salvia bowleyana HOM05D005409 ORTHO05D006456 3.1e-106 390.2 467 51.0
RcHm_v2.0_Chr5g0004681 Rosa chinensis HOM05D005409 ORTHO05D006456 5.3e-106 389.4 480 51.7
THA.LOC104809524 Tarenaya hassleriana HOM05D005409 ORTHO05D006456 3.5e-105 386.7 674 43.0
SGA_v2.0_scaffold7G03896 Striga asiatica HOM05D005409 ORTHO05D006456 1.1e-100 371.7 710 39.9
Potri.017G041300 Populus trichocarpa HOM05D005409 ORTHO05D006456 2.4e-98 364.0 665 42.3
arahy.Tifrunner.gnm1.ann1.XK38U2 Arachis hypogaea HOM05D005409 ORTHO05D006456 4.1e-98 363.2 668 42.1
Sabra17G0028000 Salix brachista HOM05D005409 ORTHO05D006456 1.2e-97 361.7 733 39.2
CDE01G0308 Ceratophyllum demersum HOM05D005409 ORTHO05D006456 1.0e-96 358.6 662 40.0
Oeu050499.1 Olea europaea HOM05D005409 ORTHO05D006456 1.7e-96 357.8 465 48.2
CDE12G0800 Ceratophyllum demersum HOM05D005409 ORTHO05D006456 1.2e-94 351.7 573 42.9
Sp1g10100 Schrenkiella parvula HOM05D005409 ORTHO05D006456 1.6e-94 351.3 674 41.8
AT1G11480 Arabidopsis thaliana HOM05D005409 ORTHO05D006456 1.2e-92 345.1 664 40.5
Sabra07G0096100 Salix brachista HOM05D005409 ORTHO05D006456 2.0e-92 344.4 784 36.2
arahy.Tifrunner.gnm1.ann1.QZ9QK3 Arachis hypogaea HOM05D005409 ORTHO05D006456 2.6e-92 344.0 710 39.6
CARHR011750 Cardamine hirsuta HOM05D005409 ORTHO05D006456 2.4e-90 337.4 661 39.9
THA.LOC104818924 Tarenaya hassleriana HOM05D005409 ORTHO05D006456 2.4e-90 337.4 632 41.5
Thhalv10007161m.g Eutrema salsugineum HOM05D005409 ORTHO05D006456 1.2e-89 335.1 669 41.4
AL1G22590 Arabidopsis lyrata HOM05D005409 ORTHO05D006456 4.7e-86 323.2 664 40.2
BcaC05g25024 Brassica carinata HOM05D005409 ORTHO05D006456 6.1e-86 322.8 667 39.3
C05p09680 Brassica napus HOM05D005409 ORTHO05D006456 1.0e-85 322.0 667 39.3
Carub.0001s1109 Capsella rubella HOM05D005409 ORTHO05D006456 1.0e-85 322.0 650 38.5
A06p08100 Brassica napus HOM05D005409 ORTHO05D006456 3.0e-85 320.5 664 40.2
BraA06t24009Z Brassica rapa HOM05D005409 ORTHO05D006456 1.5e-84 318.2 661 40.4
HPP92_000870 Vanilla planifolia HOM05D005409 ORTHO05D006456 1.5e-84 318.2 688 38.2
Aa31LG1G3270 Aethionema arabicum HOM05D005409 ORTHO05D006456 1.3e-83 315.1 678 38.1
BolC5t29709H Brassica oleracea HOM05D005409 ORTHO05D006456 2.2e-83 314.3 651 39.0
Atru.chr10.2048 Acer truncatum HOM05D005409 ORTHO05D006456 3.5e-81 307.0 356 51.7
ATR0804G077 Amborella trichopoda HOM05D005409 ORTHO05D006456 2.3e-69 267.7 758 36.7
Atru.chr6.3116 Acer truncatum HOM05D005409 ORTHO05D006456 7.5e-68 262.7 488 42.0
BcaNung07116 Brassica carinata HOM05D005409 ORTHO05D006456 8.9e-61 239.2 478 38.1
GSVIVG01006635001 Vitis vinifera HOM05D005409 ORTHO05D006456 6.4e-59 233.0 165 71.5
Ah.09g237100 Amaranthus hybridus HOM05D000067 ORTHO05D006456 6.0e-57 226.5 643 31.4
Os07g0546100 Oryza sativa ssp. japonica HOM05D005409 ORTHO05D006456 2.1e-54 218.0 677 32.9
RcHm_v2.0_Chr5g0004671 Rosa chinensis HOM05D005409 ORTHO05D006456 5.6e-47 193.4 146 67.1
Cpa.g.sc81.1 Carica papaya HOM05D005409 ORTHO05D006456 8.1e-46 189.5 193 58.5
Zm00001eb323520 Zea mays HOM05D005409 ORTHO05D006456 1.9e-42 178.3 682 31.4
Atru.chr10.2047 Acer truncatum HOM05D005409 ORTHO05D006456 9.3e-42 176.0 280 42.9
SMO118G0050 Selaginella moellendorffii HOM05D005409 ORTHO05D006456 1.0e-32 146.0 742 27.8
Haze_06667 Corylus avellana HOM05D005409 ORTHO05D006456 1.9e-26 125.2 179 43.6
Pp3c20_3440 Physcomitrium patens HOM05D005409 ORTHO05D006456 1.4e-21 109.0 922 24.7
QL05p012359 Quercus lobata HOM05D005409 ORTHO05D006456 2.6e-20 104.8 102 56.9
Atru.chr6.3115 Acer truncatum HOM05D005409 ORTHO05D006456 1.0e-19 102.8 195 39.5
Zm00001eb106500 Zea mays HOM05D005409 ORTHO05D006456 8.4e-19 99.8 458 29.0
Mapoly0113s0049 Marchantia polymorpha HOM05D005409 ORTHO05D006456 3.2e-18 97.8 1009 23.9
AagrBONN_evm.TU.Sc2ySwM_228.455 Anthoceros agrestis HOM05D005409 ORTHO05D006456 1.6e-17 95.5 118 50.0
Actinidia26960 Actinidia chinensis HOM05D005409 ORTHO05D006456 2.5e-15 88.2 86 62.8
SEGI_29006 Sequoiadendron giganteum HOM05D005409 ORTHO05D006456 5.1e-08 63.9 246 30.1
CBR_g36658 Chara braunii HOM05D005409 ORTHO05D006456 6.7e-08 63.5 888 23.9
Nn5g30945 Nelumbo nucifera HOM05D005409 ORTHO05D006456 3.3e-07 61.2 47 59.6
CAN.G466.8 Capsicum annuum HOM05D005409 ORTHO05D006456 9.7e-07 59.7 115 33.9


User provided reference genes

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