Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv18839 Davidia involucrata HOM05D006712 ORTHO05D008219 5.8e-192 674.1 347 100.0
Hma1.2p1_0101F.1_g049480 Hydrangea macrophylla HOM05D006712 ORTHO05D008219 5.7e-131 471.5 345 74.8
CSS0013127 Camellia sinensis var. sinensis HOM05D006712 ORTHO05D008219 1.7e-119 433.3 365 66.0
Lj1A268G10 Lonicera japonica HOM05D006712 ORTHO05D008219 1.4e-113 413.7 365 65.8
Cfa010172 Carpinus fangiana HOM05D006712 ORTHO05D008219 1.5e-107 393.7 368 60.1
TAR623G0680 Trochodendron aralioides HOM05D006712 ORTHO05D008219 1.2e-104 384.0 347 63.4
RcHm_v2.0_Chr5g0048501 Rosa chinensis HOM05D006712 ORTHO05D008219 1.6e-104 383.6 351 61.3
Nitab4.5_0008897g0020 Nicotiana tabacum HOM05D006712 ORTHO05D008219 1.7e-103 380.2 378 59.5
FAN11G0164 Fragaria x ananassa HOM05D006712 ORTHO05D008219 3.8e-103 379.0 353 60.3
Rhsim13G0196500 Rhododendron simsii HOM05D006712 ORTHO05D008219 1.5e-102 377.1 458 52.2
PGSC0003DMG400005929 Solanum tuberosum HOM05D006712 ORTHO05D008219 1.9e-102 376.7 356 60.4
FAN16G2749 Fragaria x ananassa HOM05D006712 ORTHO05D008219 3.3e-102 375.9 355 59.4
Cc01_g07690 Coffea canephora HOM05D006712 ORTHO05D008219 4.2e-102 375.6 371 59.6
CiPaw.13G129200 Carya illinoinensis HOM05D006712 ORTHO05D008219 1.2e-101 374.0 375 58.4
Thecc.09G272000 Theobroma cacao HOM05D006712 ORTHO05D008219 1.4e-100 370.5 370 60.0
Ciclev10028702m.g Citrus clementina HOM05D006712 ORTHO05D008219 2.3e-100 369.8 368 60.3
Sopen06g030560 Solanum pennellii HOM05D006712 ORTHO05D008219 3.0e-100 369.4 353 60.3
Duzib168G2384 Durio zibethinus HOM05D006712 ORTHO05D008219 8.9e-100 367.9 376 57.2
CAN.G919.48 Capsicum annuum HOM05D006712 ORTHO05D008219 1.7e-98 363.6 364 57.1
Lalb_Chr19g0136261 Lupinus albus HOM05D006712 ORTHO05D008219 6.3e-98 361.7 371 58.5
Atru.chr3.3110 Acer truncatum HOM05D006712 ORTHO05D008219 1.1e-97 360.9 353 59.8
TWI31G0890 Tripterygium wilfordii HOM05D006712 ORTHO05D008219 4.1e-97 359.0 378 53.2
Potri.001G216500 Populus trichocarpa HOM05D006712 ORTHO05D008219 9.2e-97 357.8 349 57.0
Hund20948 Selenicereus undatus HOM05D006712 ORTHO05D008219 6.6e-95 351.7 372 55.1
Lj3g0027754 Lotus japonicus HOM05D006712 ORTHO05D008219 1.9e-94 350.1 364 55.5
Nitab4.5_0000380g0060 Nicotiana tabacum HOM05D006712 ORTHO05D008219 3.3e-94 349.4 411 53.3
CsaV3_1G043820 Cucumis sativus L. HOM05D006712 ORTHO05D008219 4.3e-94 349.0 364 56.0
Manes.11G101400 Manihot esculenta HOM05D006712 ORTHO05D008219 4.3e-94 349.0 364 56.9
Sc21g0006790 Simmondsia chinensis HOM05D006712 ORTHO05D008219 5.6e-94 348.6 362 54.4
COL.COLO4_25432 Corchorus olitorius HOM05D006712 ORTHO05D008219 9.5e-94 347.8 361 57.6
THA.LOC104810933 Tarenaya hassleriana HOM05D006712 ORTHO05D008219 1.6e-93 347.1 344 57.3
MELO3C015061.2 Cucumis melo HOM05D006712 ORTHO05D008219 2.8e-93 346.3 364 56.3
Gohir.A09G099400 Gossypium hirsutum HOM05D006712 ORTHO05D008219 6.1e-93 345.1 365 56.4
Aqoxy1G00652 Aquilegia oxysepala HOM05D006712 ORTHO05D008219 1.4e-92 344.0 347 57.6
MSTRG.17680 Avicennia marina HOM05D006712 ORTHO05D008219 4.0e-92 342.4 371 55.0
Gorai.006G115800 Gossypium raimondii HOM05D006712 ORTHO05D008219 6.8e-92 341.7 381 54.6
Peaxi162Scf00098g00079 Petunia axillaris HOM05D006712 ORTHO05D008219 6.8e-92 341.7 350 57.4
arahy.Tifrunner.gnm1.ann1.4CVW1F Arachis hypogaea HOM05D006712 ORTHO05D008219 1.2e-91 340.9 384 52.9
DCAR_014052 Daucus carota HOM05D006712 ORTHO05D008219 2.0e-91 340.1 371 56.1
Glyma.11G178255 Glycine max HOM05D006712 ORTHO05D008219 2.0e-91 340.1 360 55.3
VMungo1127G0962 Vigna mungo HOM05D006712 ORTHO05D008219 3.4e-91 339.3 361 54.3
ClCG03G012180 Citrullus lanatus HOM05D006712 ORTHO05D008219 4.4e-91 339.0 405 52.3
AUR62020228 Chenopodium quinoa HOM05D006712 ORTHO05D008219 9.8e-91 337.8 372 54.6
Lalb_Chr03g0028431 Lupinus albus HOM05D006712 ORTHO05D008219 3.7e-90 335.9 351 56.4
Carub.0006s1976 Capsella rubella HOM05D006712 ORTHO05D008219 6.4e-90 335.1 369 53.1
Phvul.011G099200 Phaseolus vulgaris HOM05D006712 ORTHO05D008219 6.4e-90 335.1 367 54.8
AL6G33100 Arabidopsis lyrata HOM05D006712 ORTHO05D008219 8.3e-90 334.7 365 52.1
CARHR191410 Cardamine hirsuta HOM05D006712 ORTHO05D008219 8.3e-90 334.7 362 54.1
Sed0013977 Sechium edule HOM05D006712 ORTHO05D008219 1.1e-89 334.3 352 55.7
Glyma.12G094900 Glycine max HOM05D006712 ORTHO05D008219 2.4e-89 333.2 364 54.7
AUR62001554 Chenopodium quinoa HOM05D006712 ORTHO05D008219 3.2e-89 332.8 372 54.3
SalBow3G4582 Salvia bowleyana HOM05D006712 ORTHO05D008219 4.1e-89 332.4 370 54.9
Sp6g23080 Schrenkiella parvula HOM05D006712 ORTHO05D008219 5.4e-89 332.0 373 52.0
Eucgr.B03815 Eucalyptus grandis HOM05D006712 ORTHO05D008219 9.2e-89 331.3 372 52.2
Actinidia24254 Actinidia chinensis HOM05D006712 ORTHO05D008219 1.2e-88 330.9 373 55.0
Oeu009041.1 Olea europaea HOM05D006712 ORTHO05D008219 1.7e-87 327.0 369 56.1
AT5G22120 Arabidopsis thaliana HOM05D006712 ORTHO05D008219 8.6e-87 324.7 368 52.2
Aa31LG1G13310 Aethionema arabicum HOM05D006712 ORTHO05D008219 1.5e-86 323.9 379 49.3
C03p12200 Brassica napus HOM05D006712 ORTHO05D008219 1.9e-86 323.6 359 52.6
BcaC01g06601 Brassica carinata HOM05D006712 ORTHO05D008219 4.3e-86 322.4 358 52.8
GSVIVG01037582001 Vitis vinifera HOM05D006712 ORTHO05D008219 4.3e-86 322.4 314 56.7
BolC3t13693H Brassica oleracea HOM05D006712 ORTHO05D008219 7.3e-86 321.6 359 52.4
EL10Ac7g16293 Beta vulgaris HOM05D006712 ORTHO05D008219 6.2e-85 318.5 395 51.1
BcaB01g04741 Brassica carinata HOM05D006712 ORTHO05D008219 8.0e-85 318.2 363 51.8
A03p10600 Brassica napus HOM05D006712 ORTHO05D008219 1.8e-84 317.0 360 51.1
BraA03t10372Z Brassica rapa HOM05D006712 ORTHO05D008219 3.1e-84 316.2 361 51.0
arahy.Tifrunner.gnm1.ann1.UJS8TC Arachis hypogaea HOM05D006712 ORTHO05D008219 6.4e-82 308.5 388 49.7
PSO384G4991 Papaver somniferum HOM05D006712 ORTHO05D008219 5.4e-81 305.4 354 52.8
Hma1.2p1_0101F.1_g049490 Hydrangea macrophylla HOM05D006712 ORTHO05D008219 1.6e-80 303.9 230 71.3
Gohir.D09G098800 Gossypium hirsutum HOM05D006712 ORTHO05D008219 7.8e-80 301.6 236 67.4
PSO339G1919 Papaver somniferum HOM05D006712 ORTHO05D008219 1.0e-79 301.2 367 51.5
MD14G1087800 Malus domestica HOM05D006712 ORTHO05D008219 1.3e-79 300.8 232 65.1
GSVIVG01024643001 Vitis vinifera HOM05D006712 ORTHO05D008219 1.3e-79 300.8 275 59.3
Ca_19473_v3 Cicer arietinum L. HOM05D006712 ORTHO05D008219 9.5e-78 294.7 357 51.0
vmacro03955 Vaccinium macrocarpon HOM05D006712 ORTHO05D008219 7.8e-72 275.0 469 43.7
FvH4_3g26410 Fragaria vesca HOM05D006712 ORTHO05D008219 1.7e-71 273.9 353 49.0
HanXRQChr04g0096771 Helianthus annuus HOM05D006712 ORTHO05D008219 2.5e-70 270.0 229 62.4
ECA238G0730 Erigeron canadensis HOM05D006712 ORTHO05D008219 3.3e-70 269.6 237 60.3
Lsat_1_v5_gn_2_34521 Lactuca sativa HOM05D006712 ORTHO05D008219 3.6e-69 266.2 260 57.7
Migut.N02451 Erythranthe guttata HOM05D006712 ORTHO05D008219 2.4e-68 263.5 242 62.4
Actinidia07277 Actinidia chinensis HOM05D006712 ORTHO05D008219 1.9e-65 253.8 232 60.8
Zm00001eb282230 Zea mays HOM05D006712 ORTHO05D008219 1.9e-65 253.8 366 46.2
Cpa.g.sc103.11 Carica papaya HOM05D006712 ORTHO05D008219 2.1e-64 250.4 312 49.4
unitig_27.g25124 Utricularia gibba HOM05D006712 ORTHO05D008219 1.7e-63 247.3 371 45.0
HPP92_002650 Vanilla planifolia HOM05D006712 ORTHO05D008219 5.1e-63 245.7 356 45.5
SGA_v2.0_scaffold92G28138 Striga asiatica HOM05D006712 ORTHO05D008219 6.6e-63 245.4 341 47.8
Thhalv10013868m.g Eutrema salsugineum HOM05D006712 ORTHO05D008219 3.3e-62 243.0 349 43.8
Sabra16G0127200 Salix brachista HOM05D006712 ORTHO05D008219 3.6e-61 239.6 264 52.7
Medtr4g051518 Medicago truncatula HOM05D006712 ORTHO05D008219 4.8e-61 239.2 241 53.1
MBI17_g02433_MAGBIO Magnolia biondii HOM05D006712 ORTHO05D008219 6.2e-61 238.8 389 41.4
CDE06G0581 Ceratophyllum demersum HOM05D006712 ORTHO05D008219 5.8e-59 232.3 371 40.4
Haze_23559 Corylus avellana HOM05D006712 ORTHO05D008219 2.2e-58 230.3 252 54.4
QL01p019587 Quercus lobata HOM05D006712 ORTHO05D008219 7.9e-56 221.9 148 74.3
Psat7g204400 Pisum sativum HOM05D006712 ORTHO05D008219 3.3e-54 216.5 263 48.3
Nn6g34683 Nelumbo nucifera HOM05D006712 ORTHO05D008219 3.6e-53 213.0 381 41.7
BcaB08g36451 Brassica carinata HOM05D002527 ORTHO05D008219 1.1e-52 211.5 266 48.1
Ah.15g099020 Amaranthus hybridus HOM05D006712 ORTHO05D008219 3.1e-52 209.9 278 49.3
TPR.G4637 Trifolium pratense HOM05D006712 ORTHO05D008219 3.4e-51 206.5 285 46.7
BcaC04g19542 Brassica carinata HOM05D006712 ORTHO05D008219 6.4e-50 202.2 256 50.0
Prupe.7G038700 Prunus persica HOM05D006712 ORTHO05D008219 6.4e-50 202.2 235 51.1
Os01g0965600 Oryza sativa ssp. japonica HOM05D006712 ORTHO05D008219 1.1e-49 201.4 263 50.6
SHI25255 Sapria himalayana HOM05D000265 ORTHO05D000161 9.6e-46 188.3 225 45.3
SEGI_35195 Sequoiadendron giganteum HOM05D006712 ORTHO05D008219 4.2e-41 172.9 237 45.1
ATR0772G163 Amborella trichopoda HOM05D006712 ORTHO05D008219 1.9e-38 164.1 268 42.9
Thecc.09G272200 Theobroma cacao HOM05D006712 ORTHO05D008219 4.8e-37 159.5 143 63.6
Mapoly0027s0100 Marchantia polymorpha HOM05D006712 ORTHO05D008219 6.2e-37 159.1 374 33.2
QL01p019597 Quercus lobata HOM05D006712 ORTHO05D008219 1.4e-36 157.9 205 51.2
SMO119G0218 Selaginella moellendorffii HOM05D006712 ORTHO05D008219 1.8e-36 157.5 340 34.7
Pp3c7_620 Physcomitrium patens HOM05D006712 ORTHO05D008219 2.4e-36 157.1 371 34.2
C09p54580 Brassica napus HOM05D006712 ORTHO05D008219 3.3e-30 136.7 152 52.0
BolC9t58325H Brassica oleracea HOM05D006712 ORTHO05D008219 3.3e-30 136.7 152 52.0
BraA10t43946Z Brassica rapa HOM05D006712 ORTHO05D008219 1.4e-28 131.3 197 45.2
A10p18660 Brassica napus HOM05D002527 ORTHO05D002865 1.4e-25 121.3 189 43.9
BcaC04g19541 Brassica carinata HOM05D002527 ORTHO05D002865 2.5e-25 120.6 92 65.2
AagrBONN_evm.TU.Sc2ySwM_117.1746 Anthoceros agrestis HOM05D006712 ORTHO05D008219 9.4e-25 118.6 236 37.3
Medtr4g051435 Medicago truncatula HOM05D000445 ORTHO05D000314 2.0e-19 100.9 97 52.6
ATR0772G219 Amborella trichopoda HOM05D006712 ORTHO05D008219 1.3e-18 98.2 97 56.7
FAN21G2251 Fragaria x ananassa HOM05D006712 ORTHO05D008219 1.4e-17 94.7 63 71.4
Sabra16G0127300 Salix brachista HOM05D006712 ORTHO05D008219 1.2e-16 91.7 62 74.2
Duzib170G0178 Durio zibethinus HOM05D006712 ORTHO05D008219 3.9e-15 86.7 92 54.3
CBR_g40336 Chara braunii HOM05D006712 ORTHO05D008219 3.3e-14 83.6 225 30.7
CDE07G1644 Ceratophyllum demersum HOM05D006712 ORTHO05D008219 4.1e-12 76.6 63 61.9
BcaC01g06603 Brassica carinata HOM05D006712 ORTHO05D008219 5.9e-11 72.8 75 54.7
C09p54560 Brassica napus HOM05D000021 ORTHO05D000010 8.0e-08 62.4 81 48.1
BolC9t58324H Brassica oleracea HOM05D000021 ORTHO05D000010 8.0e-08 62.4 81 48.1
BcaC04g19543 Brassica carinata HOM05D006712 ORTHO05D008219 4.4e-06 56.6 39 69.2


User provided reference genes

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