Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv18766 Davidia involucrata HOM05D002893 ORTHO05D003387 2.6e-115 418.7 205 100.0
GSVIVG01019686001 Vitis vinifera HOM05D002893 ORTHO05D001173 2.6e-38 162.9 193 49.7
QL02p027241 Quercus lobata HOM05D002893 ORTHO05D003387 5.3e-36 155.2 198 47.0
Potri.011G151300 Populus trichocarpa HOM05D002893 ORTHO05D003387 5.0e-34 148.7 193 44.0
Cpa.g.sc1420.1 Carica papaya HOM05D002893 ORTHO05D003387 1.5e-30 137.1 103 64.1
PGR042G3976 Punica granatum HOM05D002893 ORTHO05D003387 3.6e-24 115.9 97 55.7
Atru.chr9.1845 Acer truncatum HOM05D002893 ORTHO05D003387 4.8e-21 105.5 197 37.1
HPP92_014974 Vanilla planifolia HOM05D002893 ORTHO05D003387 3.8e-18 95.9 103 46.6
Eucgr.E01073 Eucalyptus grandis HOM05D002893 ORTHO05D001173 5.0e-18 95.5 78 60.3
Os02g0457500 Oryza sativa ssp. japonica HOM05D002893 ORTHO05D003387 3.5e-11 72.8 102 40.2
Hund25445 Selenicereus undatus HOM05D002893 ORTHO05D003387 7.8e-11 71.6 89 40.4
Ah.02g130670 Amaranthus hybridus HOM05D002893 ORTHO05D003387 1.0e-10 71.2 101 34.7
AUR62024145 Chenopodium quinoa HOM05D002893 ORTHO05D003387 1.3e-10 70.9 86 39.5
AUR62005585 Chenopodium quinoa HOM05D002893 ORTHO05D003387 1.7e-10 70.5 86 39.5
Actinidia30889 Actinidia chinensis HOM05D002893 ORTHO05D003387 6.6e-10 68.6 101 36.6
Nitab4.5_0009757g0010 Nicotiana tabacum HOM05D002893 ORTHO05D003387 8.6e-10 68.2 101 35.6
EL10Ac6g13460 Beta vulgaris HOM05D002893 ORTHO05D003387 1.5e-09 67.4 82 40.2
TAR622G0433 Trochodendron aralioides HOM05D002893 ORTHO05D003387 2.5e-09 66.6 87 40.2
CAN.G473.80 Capsicum annuum HOM05D002893 ORTHO05D003387 5.6e-09 65.5 101 35.6
Psat3g177400 Pisum sativum HOM05D002893 ORTHO05D003387 5.6e-09 65.5 82 43.9
Peaxi162Scf00420g00443 Petunia axillaris HOM05D002893 ORTHO05D003387 9.5e-09 64.7 101 35.6
QL03p054522 Quercus lobata HOM05D002893 ORTHO05D003387 9.5e-09 64.7 86 34.9
FAN17G2054 Fragaria x ananassa HOM05D002893 ORTHO05D003387 1.2e-08 64.3 106 36.8
Gohir.A09G034400 Gossypium hirsutum HOM05D002893 ORTHO05D003387 1.2e-08 64.3 86 37.2
Gorai.006G040200 Gossypium raimondii HOM05D002893 ORTHO05D003387 1.2e-08 64.3 86 37.2
Nitab4.5_0002887g0120 Nicotiana tabacum HOM05D002893 ORTHO05D003387 1.2e-08 64.3 101 34.7
Duzib187G1811 Durio zibethinus HOM05D002893 ORTHO05D003387 1.6e-08 63.9 82 39.0
Potri.010G057300 Populus trichocarpa HOM05D002893 ORTHO05D003387 3.6e-08 62.8 81 35.8
Duzib264G0096 Durio zibethinus HOM05D002893 ORTHO05D003387 6.1e-08 62.0 86 36.0
CDE02G0478 Ceratophyllum demersum HOM05D002893 ORTHO05D003387 8.0e-08 61.6 84 38.1
Oeu058769.1 Olea europaea HOM05D002893 ORTHO05D003387 8.0e-08 61.6 101 31.7
Aa31LG11G15020 Aethionema arabicum HOM05D002893 ORTHO05D003387 1.4e-07 60.8 102 34.3
Dinv10981 Davidia involucrata HOM05D002893 ORTHO05D003387 1.4e-07 60.8 82 36.6
TWI75G1758 Tripterygium wilfordii HOM05D002893 ORTHO05D003387 1.4e-07 60.8 161 28.0
Lj1g0008810 Lotus japonicus HOM05D002893 ORTHO05D003387 1.8e-07 60.5 86 36.0
TPR.G25633 Trifolium pratense HOM05D002893 ORTHO05D003387 1.8e-07 60.5 82 39.0
CSS0014051 Camellia sinensis var. sinensis HOM05D002893 ORTHO05D003387 2.3e-07 60.1 106 28.3
Cpa.g.sc171.35 Carica papaya HOM05D002893 ORTHO05D003387 2.3e-07 60.1 86 36.0
Phvul.001G096200 Phaseolus vulgaris HOM05D002893 ORTHO05D003387 2.3e-07 60.1 81 38.3
Aqoxy5G03468 Aquilegia oxysepala HOM05D002893 ORTHO05D003387 3.0e-07 59.7 80 41.2
AT5G14230 Arabidopsis thaliana HOM05D002893 ORTHO05D003387 4.0e-07 59.3 103 34.0
CARHR199110 Cardamine hirsuta HOM05D002893 ORTHO05D003387 4.0e-07 59.3 102 34.3
Dinv33360 Davidia involucrata HOM05D002893 ORTHO05D003387 4.0e-07 59.3 86 34.9
Hma1.2p1_1954F.1_g308870 Hydrangea macrophylla HOM05D002893 ORTHO05D003387 4.0e-07 59.3 89 36.0
Lju41A50T55 Lonicera japonica HOM05D002893 ORTHO05D003387 4.0e-07 59.3 82 39.0
CSS0025114 Camellia sinensis var. sinensis HOM05D002893 ORTHO05D003387 5.2e-07 58.9 106 28.3
COL.COLO4_08759 Corchorus olitorius HOM05D002893 ORTHO05D003387 5.2e-07 58.9 100 35.0
Nn4g22385 Nelumbo nucifera HOM05D002893 ORTHO05D003387 5.2e-07 58.9 90 37.8
Hund10840 Selenicereus undatus HOM05D002893 ORTHO05D003387 5.2e-07 58.9 102 34.3
CDE09G0940 Ceratophyllum demersum HOM05D002893 ORTHO05D003387 6.8e-07 58.5 84 36.9
Manes.17G105600 Manihot esculenta HOM05D002893 ORTHO05D003387 6.8e-07 58.5 82 36.6
Thecc.04G030500 Theobroma cacao HOM05D002893 ORTHO05D003387 6.8e-07 58.5 100 35.0
CSS0041404 Camellia sinensis var. sinensis HOM05D002893 ORTHO05D003387 8.9e-07 58.2 106 27.4
Lj6A823T55 Lonicera japonica HOM05D002893 ORTHO05D003387 8.9e-07 58.2 68 42.6
AL6G24910 Arabidopsis lyrata HOM05D002893 ORTHO05D003387 1.2e-06 57.8 102 34.3
CiPaw.04G034800 Carya illinoinensis HOM05D002893 ORTHO05D003387 1.2e-06 57.8 75 42.7
Gorai.012G088700 Gossypium raimondii HOM05D002893 ORTHO05D003387 1.2e-06 57.8 70 42.9
Sp6g29800 Schrenkiella parvula HOM05D002893 ORTHO05D003387 1.2e-06 57.8 103 34.0
Zm00001eb078890 Zea mays HOM05D002893 ORTHO05D003387 1.2e-06 57.8 97 34.0
MSTRG.3091 Avicennia marina HOM05D002893 ORTHO05D003387 1.5e-06 57.4 101 33.7
C09p62930 Brassica napus HOM05D002893 ORTHO05D003387 1.5e-06 57.4 103 35.0
BolC9t59130H Brassica oleracea HOM05D002893 ORTHO05D003387 1.5e-06 57.4 103 35.0
Cfa007252 Carpinus fangiana HOM05D002893 ORTHO05D003387 1.5e-06 57.4 70 41.4
Cfa009344 Carpinus fangiana HOM05D002893 ORTHO05D003387 1.5e-06 57.4 103 28.2
Haze_14840 Corylus avellana HOM05D002893 ORTHO05D003387 1.5e-06 57.4 70 41.4
Duzib147G0805 Durio zibethinus HOM05D002893 ORTHO05D003387 1.5e-06 57.4 70 40.0
Actinidia09670 Actinidia chinensis HOM05D002893 ORTHO05D003387 2.6e-06 56.6 69 40.6
BcaC04g19051 Brassica carinata HOM05D002893 ORTHO05D003387 2.6e-06 56.6 103 34.0
A10p24240 Brassica napus HOM05D002893 ORTHO05D003387 2.6e-06 56.6 103 34.0
BraA10t44489Z Brassica rapa HOM05D002893 ORTHO05D003387 2.6e-06 56.6 103 34.0
Haze_12378 Corylus avellana HOM05D002893 ORTHO05D003387 2.6e-06 56.6 63 39.7
MBI11_g06761_MAGBIO Magnolia biondii HOM05D002893 ORTHO05D003387 3.4e-06 56.2 106 35.8
RcHm_v2.0_Chr4g0430901 Rosa chinensis HOM05D002893 ORTHO05D003387 3.4e-06 56.2 90 34.4
SGA_v2.0_scaffold18G08220 Striga asiatica HOM05D002893 ORTHO05D003387 3.4e-06 56.2 64 42.2
BcaB01g06338 Brassica carinata HOM05D002893 ORTHO05D003387 4.4e-06 55.8 103 33.0
MELO3C008209.2 Cucumis melo HOM05D002893 ORTHO05D003387 4.4e-06 55.8 70 40.0
Gohir.D04G078800 Gossypium hirsutum HOM05D002893 ORTHO05D003387 4.4e-06 55.8 70 41.4
CSS0023379 Camellia sinensis var. sinensis HOM05D002893 ORTHO05D003387 5.7e-06 55.5 70 41.4
CSS0036153 Camellia sinensis var. sinensis HOM05D002893 ORTHO05D003387 5.7e-06 55.5 70 41.4
Dinv25674 Davidia involucrata HOM05D002893 ORTHO05D003387 5.7e-06 55.5 86 33.7
PGR119G0470 Punica granatum HOM05D002893 ORTHO05D003387 5.7e-06 55.5 82 35.4
THA.LOC104802381 Tarenaya hassleriana HOM05D002893 ORTHO05D003387 5.7e-06 55.5 70 41.4
Lsat_1_v5_gn_0_14341 Lactuca sativa HOM05D002893 ORTHO05D003387 7.5e-06 55.1 101 28.7
Potri.001G333600 Populus trichocarpa HOM05D002893 ORTHO05D003387 7.5e-06 55.1 70 40.0
Eucgr.H04660 Eucalyptus grandis HOM05D002893 ORTHO05D003387 9.8e-06 54.7 101 31.7
Sed0012732 Sechium edule HOM05D002893 ORTHO05D003387 9.8e-06 54.7 75 38.7
GSVIVG01001817001 Vitis vinifera HOM05D002893 ORTHO05D003387 9.8e-06 54.7 70 38.6


User provided reference genes

Program Settings