Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv18747 Davidia involucrata HOM05D007467 ORTHO05D009441 3.4e-134 481.9 280 100.0
CSS0030138 Camellia sinensis var. sinensis HOM05D007467 ORTHO05D009441 1.5e-73 280.4 297 64.3
Duzib084G1076 Durio zibethinus HOM05D007467 ORTHO05D009441 7.2e-68 261.5 308 53.6
QL02p027667 Quercus lobata HOM05D007467 ORTHO05D009441 2.1e-67 260.0 344 55.2
Duzib205G1912 Durio zibethinus HOM05D007467 ORTHO05D009441 4.7e-67 258.8 316 58.2
Peaxi162Scf00074g00113 Petunia axillaris HOM05D007467 ORTHO05D009441 4.0e-66 255.8 299 60.5
Oeu013372.1 Olea europaea HOM05D007467 ORTHO05D009441 8.8e-66 254.6 294 60.2
Thecc.03G219300 Theobroma cacao HOM05D007467 ORTHO05D009441 1.5e-65 253.8 321 55.8
CAN.G567.94 Capsicum annuum HOM05D007467 ORTHO05D009441 2.2e-64 250.0 289 61.6
Oeu042839.1 Olea europaea HOM05D007467 ORTHO05D009441 1.6e-62 243.8 292 59.6
Prupe.5G131500 Prunus persica HOM05D007467 ORTHO05D009441 3.8e-61 239.2 344 52.6
MSTRG.13707 Avicennia marina HOM05D007467 ORTHO05D009441 8.5e-61 238.0 314 56.1
PGSC0003DMG400012234 Solanum tuberosum HOM05D007467 ORTHO05D009441 1.5e-60 237.3 287 61.0
Potri.001G082600 Populus trichocarpa HOM05D007467 ORTHO05D009441 6.1e-59 231.9 321 56.1
Cfa011912 Carpinus fangiana HOM05D007467 ORTHO05D009441 1.0e-58 231.1 325 55.1
HanXRQChr07g0192371 Helianthus annuus HOM05D007467 ORTHO05D009441 2.3e-58 229.9 256 62.5
Hma1.2p1_0456F.1_g156740 Hydrangea macrophylla HOM05D007467 ORTHO05D009441 1.5e-57 227.3 274 59.9
Ciclev10020958m.g Citrus clementina HOM05D007467 ORTHO05D009441 2.6e-57 226.5 312 54.5
MD06G1120900 Malus domestica HOM05D007467 ORTHO05D009441 2.6e-57 226.5 322 52.5
Cc08_g16860 Coffea canephora HOM05D007467 ORTHO05D009441 7.5e-57 224.9 268 60.4
Haze_09186 Corylus avellana HOM05D007467 ORTHO05D009441 7.5e-57 224.9 327 54.4
TAR636G1420 Trochodendron aralioides HOM05D007467 ORTHO05D009441 9.8e-57 224.6 257 54.5
FAN04G1879 Fragaria x ananassa HOM05D007467 ORTHO05D009441 1.3e-56 224.2 285 57.2
Sabra03G0107500 Salix brachista HOM05D007467 ORTHO05D009441 1.7e-56 223.8 309 53.1
RcHm_v2.0_Chr7g0187371 Rosa chinensis HOM05D007467 ORTHO05D009441 1.1e-55 221.1 258 58.5
Sabra01G0059300 Salix brachista HOM05D007467 ORTHO05D009441 1.8e-55 220.3 323 53.9
TAR629G1879 Trochodendron aralioides HOM05D007467 ORTHO05D009441 5.4e-55 218.8 273 60.8
Manes.02G001700 Manihot esculenta HOM05D007467 ORTHO05D009441 7.0e-55 218.4 298 50.0
Lsat_1_v5_gn_6_10100 Lactuca sativa HOM05D007467 ORTHO05D009441 2.0e-54 216.9 251 53.4
Nn1g00417 Nelumbo nucifera HOM05D007467 ORTHO05D009441 2.7e-54 216.5 284 49.6
FvH4_5g10770 Fragaria vesca HOM05D007467 ORTHO05D009441 3.5e-54 216.1 258 59.7
FAN18G0937 Fragaria x ananassa HOM05D007467 ORTHO05D009441 3.5e-54 216.1 258 59.7
Atru.chr9.1852 Acer truncatum HOM05D007467 ORTHO05D009441 1.0e-53 214.5 313 52.7
FAN13G1608 Fragaria x ananassa HOM05D007467 ORTHO05D009441 1.3e-53 214.2 263 58.9
FAN08G2920 Fragaria x ananassa HOM05D007467 ORTHO05D009441 2.9e-53 213.0 258 60.5
DCAR_006558 Daucus carota HOM05D007467 ORTHO05D009441 5.5e-52 208.8 298 48.3
MD14G1137500 Malus domestica HOM05D007467 ORTHO05D009441 9.5e-52 208.0 319 46.1
Lj2P155T22 Lonicera japonica HOM05D007467 ORTHO05D009441 6.1e-51 205.3 258 60.1
Gohir.A12G240800 Gossypium hirsutum HOM05D007467 ORTHO05D009441 2.6e-49 199.9 255 49.0
ECA233G1457 Erigeron canadensis HOM05D007467 ORTHO05D009441 4.4e-49 199.1 283 53.7
Gohir.D12G242100 Gossypium hirsutum HOM05D007467 ORTHO05D009441 2.2e-48 196.8 284 46.5
Gorai.008G259400 Gossypium raimondii HOM05D007467 ORTHO05D009441 6.3e-48 195.3 251 48.6
Sopen08g031410 Solanum pennellii HOM05D007467 ORTHO05D009441 7.0e-47 191.8 246 56.1
GSVIVG01019666001 Vitis vinifera HOM05D007467 ORTHO05D009441 7.0e-47 191.8 187 73.3
Solyc08g083220.1 Solanum lycopersicum HOM05D007467 ORTHO05D009441 9.2e-47 191.4 246 56.5
Aqoxy7G00009 Aquilegia oxysepala HOM05D007467 ORTHO05D009441 1.0e-45 188.0 273 56.4
CANSAT21G0614 Cannabis sativa HOM05D007467 ORTHO05D009441 3.9e-45 186.0 284 51.4
TWI60G0745 Tripterygium wilfordii HOM05D007467 ORTHO05D009441 5.0e-45 185.7 307 50.2
Rhsim02G0253000 Rhododendron simsii HOM05D007467 ORTHO05D009441 4.3e-44 182.6 233 62.2
vmacro11497 Vaccinium macrocarpon HOM05D007467 ORTHO05D009441 9.5e-44 181.4 222 63.1
SGA_v2.0_scaffold267G46175 Striga asiatica HOM05D007467 ORTHO05D009441 6.1e-43 178.7 284 48.6
Gohir.A09G188250 Gossypium hirsutum HOM05D007467 ORTHO05D009441 1.0e-42 177.9 247 57.9
TWI15G0957 Tripterygium wilfordii HOM05D007467 ORTHO05D009441 1.8e-42 177.2 314 41.7
Gorai.006G205400 Gossypium raimondii HOM05D007467 ORTHO05D009441 5.2e-42 175.6 243 58.0
Gohir.D09G183100 Gossypium hirsutum HOM05D007467 ORTHO05D009441 1.5e-41 174.1 243 57.6
Nn3g18852 Nelumbo nucifera HOM05D007467 ORTHO05D009441 2.6e-41 173.3 296 47.6
PGR042G1595 Punica granatum HOM05D007467 ORTHO05D009441 9.8e-41 171.4 325 49.5
Aa31LG2G1740 Aethionema arabicum HOM05D007467 ORTHO05D009441 1.7e-40 170.6 249 52.2
COL.COLO4_10812 Corchorus olitorius HOM05D007467 ORTHO05D009441 1.4e-39 167.5 187 55.6
CiPaw.11G111200 Carya illinoinensis HOM05D007467 ORTHO05D009441 7.0e-39 165.2 187 66.8
Eucgr.E01052 Eucalyptus grandis HOM05D007467 ORTHO05D009441 6.0e-38 162.2 360 44.7
Nitab4.5_0008141g0040 Nicotiana tabacum HOM05D007467 ORTHO05D009441 3.0e-37 159.8 215 60.9
PSO478G5135 Papaver somniferum HOM05D007467 ORTHO05D009441 7.3e-36 155.2 290 42.1
Nitab4.5_0002720g0040 Nicotiana tabacum HOM05D007467 ORTHO05D009441 9.5e-36 154.8 211 61.6
PSO782G5165 Papaver somniferum HOM05D007467 ORTHO05D009441 1.6e-35 154.1 288 44.8
Potri.003G147900 Populus trichocarpa HOM05D007467 ORTHO05D009441 1.6e-35 154.1 230 55.2
CARHR046220 Cardamine hirsuta HOM05D007467 ORTHO05D009441 1.8e-34 150.6 242 41.7
Sed0003485 Sechium edule HOM05D007467 ORTHO05D009441 1.5e-33 147.5 266 48.9
BcaC04g22507 Brassica carinata HOM05D007467 ORTHO05D009441 5.8e-33 145.6 258 45.7
Thhalv10023631m.g Eutrema salsugineum HOM05D007467 ORTHO05D009441 1.7e-32 144.1 249 39.0
Carub.0002s0004 Capsella rubella HOM05D007467 ORTHO05D009441 6.4e-32 142.1 267 47.9
MBI04_g43054_MAGBIO Magnolia biondii HOM05D007467 ORTHO05D009441 6.4e-32 142.1 187 48.1
MBI04_g15581_MAGBIO Magnolia biondii HOM05D007467 ORTHO05D009441 1.9e-31 140.6 187 47.6
MBI12_g21574_MAGBIO Magnolia biondii HOM05D007467 ORTHO05D009441 4.1e-31 139.4 281 48.8
CsaV3_5G001620 Cucumis sativus L. HOM05D007467 ORTHO05D009441 1.0e-29 134.8 290 44.5
Sp2g00870 Schrenkiella parvula HOM05D007467 ORTHO05D009441 1.7e-29 134.0 267 44.2
THA.LOC104823626 Tarenaya hassleriana HOM05D007467 ORTHO05D009441 1.4e-26 124.4 263 42.6
A09p15270 Brassica napus HOM05D007467 ORTHO05D009441 3.1e-26 123.2 257 42.8
BraA09t37173Z Brassica rapa HOM05D007467 ORTHO05D009441 3.1e-26 123.2 257 42.8
C09p18550 Brassica napus HOM05D007467 ORTHO05D009441 4.0e-26 122.9 258 41.9
BolC9t54751H Brassica oleracea HOM05D007467 ORTHO05D009441 4.0e-26 122.9 258 41.9
MELO3C005789.2 Cucumis melo HOM05D007467 ORTHO05D009441 4.4e-25 119.4 213 51.2
ClCG01G001480 Citrullus lanatus HOM05D007467 ORTHO05D009441 1.3e-24 117.9 219 50.2
CDE02G3312 Ceratophyllum demersum HOM05D007467 ORTHO05D009441 3.2e-23 113.2 245 38.8
AT1G64690 Arabidopsis thaliana HOM05D007467 ORTHO05D009441 8.6e-21 105.1 243 45.3
AUR62007067 Chenopodium quinoa HOM05D007467 ORTHO05D009441 1.9e-20 104.0 180 38.9
AUR62019932 Chenopodium quinoa HOM05D007467 ORTHO05D009441 1.9e-20 104.0 183 43.2
BcaB07g31413 Brassica carinata HOM05D007467 ORTHO05D009441 7.3e-20 102.1 246 42.3
AL2G10070 Arabidopsis lyrata HOM05D007467 ORTHO05D009441 1.2e-19 101.3 272 42.3
Oeu022032.1 Olea europaea HOM05D007467 ORTHO05D009441 1.6e-19 100.9 113 55.8
EL10Ac5g12411 Beta vulgaris HOM05D007467 ORTHO05D009441 8.1e-19 98.6 185 41.1
ATR0579G156 Amborella trichopoda HOM05D007467 ORTHO05D009441 5.8e-17 92.4 242 33.1
Zm00001eb023700 Zea mays HOM05D007467 ORTHO05D009441 3.8e-16 89.7 245 39.2
ClCG00G001110 Citrullus lanatus HOM05D007467 ORTHO05D009441 3.2e-15 86.7 151 51.7
Ah.12g053280 Amaranthus hybridus HOM05D007467 ORTHO05D009441 1.3e-13 81.3 284 31.0
Actinidia22211 Actinidia chinensis HOM05D007467 ORTHO05D009441 2.1e-11 73.9 85 48.2
BcaB07g31547 Brassica carinata HOM05D007467 ORTHO05D009441 1.8e-10 70.9 170 34.7
SEGI_00451 Sequoiadendron giganteum HOM05D002319 ORTHO05D002374 6.4e-08 62.4 125 60.8
PGSC0003DMG400013732 Solanum tuberosum HOM05D007467 ORTHO05D009441 8.4e-08 62.0 116 41.4
CDE11G0649 Ceratophyllum demersum HOM05D007467 ORTHO05D009441 1.4e-07 61.2 232 30.6
AagrBONN_evm.TU.Sc2ySwM_369.392 Anthoceros agrestis HOM05D002166 ORTHO05D002374 4.2e-07 59.7 125 54.4
SEGI_05627 Sequoiadendron giganteum HOM05D002166 ORTHO05D002634 5.4e-07 59.3 134 54.5
Os10g0562600 Oryza sativa ssp. japonica HOM05D007467 ORTHO05D009441 1.2e-06 58.2 135 34.1
Pp3c9_16460 Physcomitrium patens HOM05D002319 ORTHO05D002374 1.2e-06 58.2 115 40.0
PGR119G1567 Punica granatum HOM05D002319 ORTHO05D002374 1.2e-06 58.2 143 36.4
Pp3c18_10070 Physcomitrium patens HOM05D002166 ORTHO05D002634 1.6e-06 57.8 172 44.2
Zm00001eb298080 Zea mays HOM05D002166 ORTHO05D002634 1.6e-06 57.8 117 42.7
Duzib093G1299 Durio zibethinus HOM05D002319 ORTHO05D002374 2.7e-06 57.0 151 41.1
arahy.Tifrunner.gnm1.ann1.2WUV3V Arachis hypogaea HOM05D002166 ORTHO05D002634 3.5e-06 56.6 126 54.8
arahy.Tifrunner.gnm1.ann1.MVDX5J Arachis hypogaea HOM05D002166 ORTHO05D002634 3.5e-06 56.6 126 54.8
Dinv21153 Davidia involucrata HOM05D002319 ORTHO05D002374 3.5e-06 56.6 167 29.9
Zm00001eb070190 Zea mays HOM05D002166 ORTHO05D002634 3.5e-06 56.6 180 33.3
Glyma.02G290700 Glycine max HOM05D002166 ORTHO05D002634 4.6e-06 56.2 143 38.5
Glyma.14G024000 Glycine max HOM05D002166 ORTHO05D002634 4.6e-06 56.2 143 47.6
PGSC0003DMG400027878 Solanum tuberosum HOM05D002166 ORTHO05D002634 4.6e-06 56.2 124 37.9
TAR629G0586 Trochodendron aralioides HOM05D002166 ORTHO05D002634 4.6e-06 56.2 117 39.3
Gohir.A04G060700 Gossypium hirsutum HOM05D002319 ORTHO05D002374 6.0e-06 55.8 149 34.2
HanXRQChr05g0159381 Helianthus annuus HOM05D002166 ORTHO05D002634 6.0e-06 55.8 166 38.0
Nitab4.5_0001913g0130 Nicotiana tabacum HOM05D002166 ORTHO05D002634 6.0e-06 55.8 124 54.8
Pp3c22_1560 Physcomitrium patens HOM05D002166 ORTHO05D002634 6.0e-06 55.8 133 36.8
MSTRG.15149 Avicennia marina HOM05D002166 ORTHO05D002634 7.9e-06 55.5 125 38.4
CSS0030432 Camellia sinensis var. sinensis HOM05D002166 ORTHO05D002634 7.9e-06 55.5 124 46.8
CAN.G1404.1 Capsicum annuum HOM05D002166 ORTHO05D002634 7.9e-06 55.5 131 35.9
Ca_06318_v3 Cicer arietinum L. HOM05D002166 ORTHO05D002634 7.9e-06 55.5 120 54.2
Ca_30807_v3 Cicer arietinum L. HOM05D002166 ORTHO05D002634 7.9e-06 55.5 120 54.2
Dinv40752 Davidia involucrata HOM05D002166 ORTHO05D002634 7.9e-06 55.5 132 39.4
ECA246G2514 Erigeron canadensis HOM05D002166 ORTHO05D002634 7.9e-06 55.5 183 43.2


User provided reference genes

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