Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv18681 Davidia involucrata HOM05D003691 ORTHO05D004288 6.3e-45 183.7 92 100.0
Dinv01749 Davidia involucrata HOM05D003691 ORTHO05D004288 3.8e-34 147.9 77 94.8
Dinv17119 Davidia involucrata HOM05D003691 ORTHO05D004288 7.0e-20 100.5 54 92.6
Dinv39731 Davidia involucrata HOM05D003691 ORTHO05D004288 2.5e-17 92.0 48 89.6
TAR624G0007 Trochodendron aralioides HOM05D003691 ORTHO05D004288 1.5e-14 82.8 48 77.1
QL08p031532 Quercus lobata HOM05D003691 ORTHO05D004288 5.7e-14 80.9 48 77.1
Haze_12800 Corylus avellana HOM05D003691 ORTHO05D004288 9.8e-14 80.1 48 75.0
CiPaw.03G157800 Carya illinoinensis HOM05D003691 ORTHO05D004288 8.3e-13 77.0 48 72.9
Lj8A127T48 Lonicera japonica HOM05D003691 ORTHO05D004288 8.3e-13 77.0 48 68.8
Dinv08745 Davidia involucrata HOM05D003691 ORTHO05D004288 1.4e-12 76.3 48 75.0
Manes.04G099700 Manihot esculenta HOM05D003691 ORTHO05D004288 1.4e-12 76.3 48 68.8
CSS0013476 Camellia sinensis var. sinensis HOM05D003691 ORTHO05D004288 7.0e-12 73.9 48 68.8
Hma1.2p1_0895F.1_g233770 Hydrangea macrophylla HOM05D003691 ORTHO05D004288 9.2e-12 73.6 48 66.7
Oeu027232.1 Olea europaea HOM05D003691 ORTHO05D004288 1.2e-11 73.2 48 66.7
Rhsim04G0052200 Rhododendron simsii HOM05D003691 ORTHO05D004288 1.6e-11 72.8 48 66.7
ClCG02G009060 Citrullus lanatus HOM05D003691 ORTHO05D004288 2.0e-11 72.4 48 64.6
TAR626G1388 Trochodendron aralioides HOM05D003691 ORTHO05D004288 2.7e-11 72.0 46 71.7
vmacro09345 Vaccinium macrocarpon HOM05D003691 ORTHO05D004288 2.7e-11 72.0 48 66.7
Sed0022442 Sechium edule HOM05D003691 ORTHO05D004288 3.5e-11 71.6 47 63.8
MD09G1071300 Malus domestica HOM05D003691 ORTHO05D004288 5.9e-11 70.9 48 68.8
GSVIVG01030475001 Vitis vinifera HOM05D003691 ORTHO05D004288 5.9e-11 70.9 48 68.8
Peaxi162Scf00007g00129 Petunia axillaris HOM05D003691 ORTHO05D004288 1.0e-10 70.1 47 66.0
Prupe.3G213700 Prunus persica HOM05D003691 ORTHO05D004288 1.0e-10 70.1 48 66.7
Potri.014G155900 Populus trichocarpa HOM05D003691 ORTHO05D004288 1.3e-10 69.7 48 64.6
Oeu036739.1 Olea europaea HOM05D003691 ORTHO05D004288 5.0e-10 67.8 50 64.0
Sabra14G0117900 Salix brachista HOM05D003691 ORTHO05D004288 5.0e-10 67.8 48 64.6
Solyc07g049680.4 Solanum lycopersicum HOM05D003691 ORTHO05D004288 5.0e-10 67.8 48 62.5
Sopen07g025100 Solanum pennellii HOM05D003691 ORTHO05D004288 5.0e-10 67.8 48 62.5
TWI75G0495 Tripterygium wilfordii HOM05D003691 ORTHO05D004288 1.1e-09 66.6 48 64.6
Nitab4.5_0015742g0010 Nicotiana tabacum HOM05D003691 ORTHO05D004288 2.5e-09 65.5 52 59.6
Nitab4.5_0000130g0240 Nicotiana tabacum HOM05D003691 ORTHO05D004288 3.3e-09 65.1 52 59.6
CAN.G290.10 Capsicum annuum HOM05D003691 ORTHO05D004288 4.3e-09 64.7 48 60.4
MELO3C019300.2 Cucumis melo HOM05D003691 ORTHO05D004288 4.3e-09 64.7 48 58.3
Nn1g03443 Nelumbo nucifera HOM05D003691 ORTHO05D004288 5.6e-09 64.3 48 60.4
Aqoxy1G03453 Aquilegia oxysepala HOM05D003691 ORTHO05D004288 7.3e-09 63.9 48 66.7
CANSAT64G0165 Cannabis sativa HOM05D003691 ORTHO05D004288 9.5e-09 63.5 47 59.6
Atru.chr6.3228 Acer truncatum HOM05D003691 ORTHO05D004288 1.2e-08 63.2 47 63.8
Eucgr.A01107 Eucalyptus grandis HOM05D003691 ORTHO05D004288 1.2e-08 63.2 44 63.6
CsaV3_2G034670 Cucumis sativus L. HOM05D003691 ORTHO05D004288 2.8e-08 62.0 48 54.2
Ciclev10014542m.g Citrus clementina HOM05D003691 ORTHO05D004288 3.6e-08 61.6 44 63.6
MD11G1212100 Malus domestica HOM05D003691 ORTHO05D004288 4.7e-08 61.2 57 54.4
Gohir.A07G081900 Gossypium hirsutum HOM05D003691 ORTHO05D004288 6.1e-08 60.8 48 60.4
Gohir.D07G088400 Gossypium hirsutum HOM05D003691 ORTHO05D004288 6.1e-08 60.8 48 60.4
Gorai.001G094600 Gossypium raimondii HOM05D003691 ORTHO05D004288 6.1e-08 60.8 48 60.4
PGR042G1566 Punica granatum HOM05D003691 ORTHO05D004288 6.1e-08 60.8 51 62.7
ECA240G1119 Erigeron canadensis HOM05D003691 ORTHO05D004288 1.4e-07 59.7 48 58.3
SGA_v2.0_scaffold70G23393 Striga asiatica HOM05D003691 ORTHO05D004288 1.4e-07 59.7 51 54.9
MSTRG.14857 Avicennia marina HOM05D003691 ORTHO05D004288 1.8e-07 59.3 48 56.2
LjContig00274_ERROPOS1100000g0006521 Lotus japonicus HOM05D003691 ORTHO05D004288 1.8e-07 59.3 51 54.9
DCAR_019753 Daucus carota HOM05D003691 ORTHO05D004288 2.3e-07 58.9 47 53.2
MD03G1195700 Malus domestica HOM05D003691 ORTHO05D004288 2.3e-07 58.9 54 55.6
PSO210G5093 Papaver somniferum HOM05D003691 ORTHO05D004288 3.0e-07 58.5 33 78.8
QL08p006881 Quercus lobata HOM05D003691 ORTHO05D004288 4.0e-07 58.2 45 60.0
Thecc.01G178100 Theobroma cacao HOM05D003691 ORTHO05D004288 4.0e-07 58.2 48 54.2
Lalb_Chr19g0136061 Lupinus albus HOM05D003691 ORTHO05D004288 5.2e-07 57.8 48 56.2
Prupe.4G220400 Prunus persica HOM05D003691 ORTHO05D004288 5.2e-07 57.8 49 57.1
TWI36G1355 Tripterygium wilfordii HOM05D003691 ORTHO05D004288 5.2e-07 57.8 49 59.2
Duzib138G0684 Durio zibethinus HOM05D003691 ORTHO05D004288 6.8e-07 57.4 48 58.3
MBI07_g01730_MAGBIO Magnolia biondii HOM05D003691 ORTHO05D004288 6.8e-07 57.4 48 58.3
VMungo1127G0496 Vigna mungo HOM05D003691 ORTHO05D004288 6.8e-07 57.4 50 54.0
Phvul.011G101300 Phaseolus vulgaris HOM05D003691 ORTHO05D004288 8.9e-07 57.0 50 54.0
Glyma.06G308100 Glycine max HOM05D003691 ORTHO05D004288 2.6e-06 55.5 50 54.0
Lj8A171G43 Lonicera japonica HOM05D003691 ORTHO05D004288 2.6e-06 55.5 44 59.1
Lalb_Chr03g0028581 Lupinus albus HOM05D003691 ORTHO05D004288 2.6e-06 55.5 50 58.0
Haze_09719 Corylus avellana HOM05D003691 ORTHO05D004288 3.4e-06 55.1 51 54.9
Cfa020301 Carpinus fangiana HOM05D003691 ORTHO05D004288 4.4e-06 54.7 50 56.0
SalBow7G1078 Salvia bowleyana HOM05D003691 ORTHO05D004288 5.7e-06 54.3 48 54.2
arahy.Tifrunner.gnm1.ann1.4D79G7 Arachis hypogaea HOM05D003691 ORTHO05D004288 7.5e-06 53.9 50 62.0
arahy.Tifrunner.gnm1.ann1.AS5DTW Arachis hypogaea HOM05D003691 ORTHO05D004288 7.5e-06 53.9 50 62.0
PGSC0003DMG400001077 Solanum tuberosum HOM05D003691 ORTHO05D004288 7.5e-06 53.9 48 52.1
ECA236G1051 Erigeron canadensis HOM05D003691 ORTHO05D004288 9.8e-06 53.5 49 57.1


User provided reference genes

Program Settings