Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv18563 Davidia involucrata HOM05D000860 ORTHO05D006064 2.8e-73 278.5 137 100.0
Dinv10889 Davidia involucrata HOM05D000860 ORTHO05D006064 2.8e-49 198.7 118 85.6
Dinv13864 Davidia involucrata HOM05D000860 ORTHO05D006064 2.8e-49 198.7 118 85.6
Actinidia12480 Actinidia chinensis HOM05D000860 ORTHO05D006064 7.2e-37 157.5 118 67.8
Hma1.2p1_0712F.1_g207590 Hydrangea macrophylla HOM05D000860 ORTHO05D006064 5.1e-35 151.4 119 63.9
TAR627G1143 Trochodendron aralioides HOM05D000860 ORTHO05D006064 4.8e-33 144.8 123 62.6
Cfa014481 Carpinus fangiana HOM05D000860 ORTHO05D006064 1.2e-31 140.2 123 60.2
CiPaw.04G120200 Carya illinoinensis HOM05D000860 ORTHO05D006064 1.5e-31 139.8 123 61.0
QL01p000412 Quercus lobata HOM05D000860 ORTHO05D006064 2.6e-31 139.0 123 60.2
ClCG02G001460 Citrullus lanatus HOM05D000860 ORTHO05D006064 3.8e-30 135.2 123 56.1
Haze_12996 Corylus avellana HOM05D000860 ORTHO05D006064 6.5e-30 134.4 123 56.9
CsaV3_7G003950 Cucumis sativus L. HOM05D000860 ORTHO05D006064 6.5e-30 134.4 125 57.6
Prupe.3G223700 Prunus persica HOM05D000860 ORTHO05D006064 6.1e-28 127.9 123 56.9
Rhsim06G0154700 Rhododendron simsii HOM05D000860 ORTHO05D006064 1.4e-27 126.7 113 62.8
Thecc.08G153000 Theobroma cacao HOM05D000860 ORTHO05D006064 1.4e-27 126.7 123 56.1
Lalb_Chr19g0135621 Lupinus albus HOM05D000860 ORTHO05D006064 2.3e-27 125.9 108 62.0
MSTRG.12291 Avicennia marina HOM05D000860 ORTHO05D006064 3.0e-27 125.6 124 52.4
Migut.H01212 Erythranthe guttata HOM05D000860 ORTHO05D006064 3.0e-27 125.6 108 55.6
Aqoxy1G03983 Aquilegia oxysepala HOM05D000860 ORTHO05D006064 5.2e-27 124.8 107 57.9
COL.COLO4_08562 Corchorus olitorius HOM05D000860 ORTHO05D006064 6.7e-27 124.4 123 55.3
PSO017G4595 Papaver somniferum HOM05D000860 ORTHO05D006064 8.8e-27 124.0 128 53.1
MELO3C004860.2 Cucumis melo HOM05D000860 ORTHO05D006064 1.1e-26 123.6 111 56.8
MELO3C008658.2 Cucumis melo HOM05D000860 ORTHO05D006064 1.5e-26 123.2 111 55.9
Oeu040640.1 Olea europaea HOM05D000860 ORTHO05D006064 2.0e-26 122.9 108 56.5
FAN09G3393 Fragaria x ananassa HOM05D000860 ORTHO05D006064 2.6e-26 122.5 123 51.2
Aqoxy2G01929 Aquilegia oxysepala HOM05D000860 ORTHO05D006064 5.7e-26 121.3 107 57.0
TWI75G0472 Tripterygium wilfordii HOM05D000860 ORTHO05D006064 7.4e-26 120.9 118 55.9
MD09G1102000 Malus domestica HOM05D000860 ORTHO05D006064 1.7e-25 119.8 118 55.1
SGA_v2.0_scaffold49G18328 Striga asiatica HOM05D000860 ORTHO05D006064 6.3e-25 117.9 119 52.1
MELO3C029864.2 Cucumis melo HOM05D000860 ORTHO05D006064 8.2e-25 117.5 112 54.5
SGA_v2.0_scaffold159G37586 Striga asiatica HOM05D000860 ORTHO05D006064 8.2e-25 117.5 119 53.8
MELO3C027253.2 Cucumis melo HOM05D000860 ORTHO05D006064 1.1e-24 117.1 125 52.8
Duzib116G0686 Durio zibethinus HOM05D000860 ORTHO05D006064 1.1e-24 117.1 123 53.7
Cpa.g.sc34.49 Carica papaya HOM05D000860 ORTHO05D006064 2.4e-24 115.9 118 52.5
CANSAT64G2191 Cannabis sativa HOM05D000860 ORTHO05D006064 4.1e-24 115.2 107 55.1
MD09G1127700 Malus domestica HOM05D000860 ORTHO05D006064 4.1e-24 115.2 118 52.5
RcHm_v2.0_Chr2g0160701 Rosa chinensis HOM05D000860 ORTHO05D006064 4.1e-24 115.2 118 51.7
Gohir.A03G029000 Gossypium hirsutum HOM05D000860 ORTHO05D006064 5.3e-24 114.8 118 52.5
Gorai.003G146300 Gossypium raimondii HOM05D000860 ORTHO05D006064 5.3e-24 114.8 107 54.2
PGR042G0516 Punica granatum HOM05D000860 ORTHO05D006064 5.3e-24 114.8 118 56.8
Ciclev10016548m.g Citrus clementina HOM05D000860 ORTHO05D006064 7.0e-24 114.4 118 55.1
Gohir.D03G139600 Gossypium hirsutum HOM05D000860 ORTHO05D006064 7.0e-24 114.4 118 51.7
MELO3C027993.2 Cucumis melo HOM05D000860 ORTHO05D006064 9.1e-24 114.0 125 50.4
Manes.12G078700 Manihot esculenta HOM05D000860 ORTHO05D006064 1.6e-23 113.2 125 52.8
Aqoxy4G01788 Aquilegia oxysepala HOM05D000860 ORTHO05D006064 2.6e-23 112.5 107 52.3
GSVIVG01000419001 Vitis vinifera HOM05D000860 ORTHO05D006064 2.6e-23 112.5 124 51.6
Atru.chr6.3106 Acer truncatum HOM05D000860 ORTHO05D006064 3.5e-23 112.1 123 52.0
DCAR_009702 Daucus carota HOM05D000860 ORTHO05D006064 3.5e-23 112.1 123 48.8
MELO3C000317.2 Cucumis melo HOM05D000860 ORTHO05D006064 4.5e-23 111.7 112 54.5
Phvul.011G108000 Phaseolus vulgaris HOM05D000860 ORTHO05D006064 1.3e-22 110.2 123 52.8
SHI10287 Sapria himalayana HOM05D000860 ORTHO05D006064 1.7e-22 109.8 120 53.3
Psat7g163240 Pisum sativum HOM05D000860 ORTHO05D006064 2.9e-22 109.0 124 50.0
Gohir.A05G243700 Gossypium hirsutum HOM05D000860 ORTHO05D006064 6.5e-22 107.8 123 49.6
Nitab4.5_0007512g0030 Nicotiana tabacum HOM05D000860 ORTHO05D006064 6.5e-22 107.8 119 48.7
Solyc02g091600.1 Solanum lycopersicum HOM05D000860 ORTHO05D006064 1.1e-21 107.1 126 48.4
FAN16G3168 Fragaria x ananassa HOM05D000860 ORTHO05D006064 1.9e-21 106.3 107 48.6
Cc05_g05560 Coffea canephora HOM05D000860 ORTHO05D006064 3.2e-21 105.5 130 50.8
PGSC0003DMG400030659 Solanum tuberosum HOM05D000860 ORTHO05D006064 3.2e-21 105.5 126 47.6
Gorai.009G254500 Gossypium raimondii HOM05D000860 ORTHO05D006064 4.2e-21 105.1 123 49.6
Nitab4.5_0000291g0080 Nicotiana tabacum HOM05D000860 ORTHO05D006064 4.2e-21 105.1 126 46.8
Sed0003367 Sechium edule HOM05D000860 ORTHO05D006064 4.2e-21 105.1 118 48.3
Solyc02g063460.1 Solanum lycopersicum HOM05D000860 ORTHO05D006064 5.5e-21 104.8 119 47.9
Lj3g0007411 Lotus japonicus HOM05D000860 ORTHO05D006064 7.2e-21 104.4 119 51.3
MELO3C032914.2 Cucumis melo HOM05D000860 ORTHO05D006064 9.4e-21 104.0 94 57.4
Sopen02g036220 Solanum pennellii HOM05D000860 ORTHO05D006064 9.4e-21 104.0 126 46.8
Sopen02g014550 Solanum pennellii HOM05D000860 ORTHO05D006064 1.2e-20 103.6 119 47.9
VMungo1127G0801 Vigna mungo HOM05D000860 ORTHO05D006064 1.6e-20 103.2 123 48.8
unitig_26.g9929 Utricularia gibba HOM05D000860 ORTHO05D006064 2.1e-20 102.8 108 48.1
PGSC0003DMG400010404 Solanum tuberosum HOM05D000860 ORTHO05D006064 2.7e-20 102.4 119 47.9
Sp7g24690 Schrenkiella parvula HOM05D000860 ORTHO05D006064 6.1e-20 101.3 107 44.9
Thhalv10027187m.g Eutrema salsugineum HOM05D000860 ORTHO05D006064 8.0e-20 100.9 107 44.9
BraA03t14755Z Brassica rapa HOM05D000860 ORTHO05D006064 3.0e-19 99.0 107 45.8
Aa31LG5G12200 Aethionema arabicum HOM05D000860 ORTHO05D006064 4.0e-19 98.6 107 45.8
A03p56870 Brassica napus HOM05D000860 ORTHO05D006064 5.2e-19 98.2 107 45.8
Eucgr.A01742 Eucalyptus grandis HOM05D000860 ORTHO05D006064 5.2e-19 98.2 125 47.2
Potri.013G152100 Populus trichocarpa HOM05D000860 ORTHO05D006064 5.2e-19 98.2 125 49.6
BolC7t45993H Brassica oleracea HOM05D000860 ORTHO05D006064 8.8e-19 97.4 107 45.8
CARHR234350 Cardamine hirsuta HOM05D000860 ORTHO05D006064 1.2e-18 97.1 107 43.9
BcaC06g32732 Brassica carinata HOM05D000860 ORTHO05D006064 1.5e-18 96.7 123 43.1
CAN.G1061.28 Capsicum annuum HOM05D000860 ORTHO05D006064 2.0e-18 96.3 108 46.3
Potri.019G125300 Populus trichocarpa HOM05D000860 ORTHO05D006064 2.6e-18 95.9 125 49.6
Sabra13G0122200 Salix brachista HOM05D000860 ORTHO05D006064 2.6e-18 95.9 120 50.0
C07p55200 Brassica napus HOM05D000860 ORTHO05D006064 4.4e-18 95.1 107 44.9
AT2G16030 Arabidopsis thaliana HOM05D000860 ORTHO05D006064 7.5e-18 94.4 107 42.1
AL7G26100 Arabidopsis lyrata HOM05D000860 ORTHO05D006064 9.7e-18 94.0 107 43.0
Medtr4g046723 Medicago truncatula HOM05D000860 ORTHO05D006064 1.7e-17 93.2 107 51.4
Carub.0007s1411 Capsella rubella HOM05D000860 ORTHO05D006064 2.8e-17 92.4 107 41.1
Ah.04g159810 Amaranthus hybridus HOM05D000735 ORTHO05D000838 3.1e-16 89.0 116 41.4
Medtr4g063440 Medicago truncatula HOM05D000860 ORTHO05D006064 4.1e-16 88.6 97 48.5
AUR62000872 Chenopodium quinoa HOM05D000860 ORTHO05D006064 9.1e-16 87.4 115 45.2
AUR62005104 Chenopodium quinoa HOM05D000860 ORTHO05D006064 9.1e-16 87.4 115 45.2
HanXRQChr12g0361971 Helianthus annuus HOM05D000860 ORTHO05D006064 2.0e-15 86.3 109 44.0
Glyma.12G103300 Glycine max HOM05D000860 ORTHO05D006064 2.7e-15 85.9 127 46.5
CDE02G4720 Ceratophyllum demersum HOM05D000860 ORTHO05D006064 3.5e-15 85.5 122 42.6
Nitab4.5_0000036g0430 Nicotiana tabacum HOM05D000860 ORTHO05D006064 4.5e-15 85.1 114 41.2
Gohir.D05G244866 Gossypium hirsutum HOM05D000860 ORTHO05D006064 1.3e-14 83.6 123 43.1
FAN05G2158 Fragaria x ananassa HOM05D000860 ORTHO05D006064 8.5e-14 80.9 102 46.1
EL10Ac4g09314 Beta vulgaris HOM05D000860 ORTHO05D006064 2.5e-13 79.3 115 41.7
ATR0804G076 Amborella trichopoda HOM05D000860 ORTHO05D006064 1.2e-12 77.0 118 41.5
HPP92_001790 Vanilla planifolia HOM05D000860 ORTHO05D006064 3.0e-11 72.4 126 37.3
MBI02_g37279_MAGBIO Magnolia biondii HOM05D000860 ORTHO05D006064 5.2e-11 71.6 105 41.9
Sabra19G0131100 Salix brachista HOM05D000860 ORTHO05D006064 6.8e-11 71.2 125 40.0
MELO3C029959.2 Cucumis melo HOM05D000860 ORTHO05D006064 8.8e-11 70.9 66 59.1
Thhalv10022104m.g Eutrema salsugineum HOM05D000860 ORTHO05D006064 1.7e-09 66.6 71 46.5
Dinv14296 Davidia involucrata HOM05D000674 ORTHO05D001370 3.7e-09 65.5 33 87.9
AL8G39340 Arabidopsis lyrata HOM05D000860 ORTHO05D006064 7.0e-08 61.2 76 42.1
Dinv22242 Davidia involucrata HOM05D000860 ORTHO05D006064 7.0e-08 61.2 33 84.8
AL3G51450 Arabidopsis lyrata HOM05D000860 ORTHO05D006064 2.0e-07 59.7 76 40.8
Sc12g0002490 Simmondsia chinensis HOM05D000860 ORTHO05D006064 2.0e-07 59.7 77 42.9
Actinidia27025 Actinidia chinensis HOM05D000860 ORTHO05D006064 1.7e-06 56.6 44 68.2


User provided reference genes

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