Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv18455 Davidia involucrata HOM05D006402 ORTHO05D008099 2.4e-82 308.9 167 100.0
Hma1.2p1_0023F.1_g015780 Hydrangea macrophylla HOM05D006402 ORTHO05D008099 3.4e-57 225.3 156 74.4
CSS0047659 Camellia sinensis var. sinensis HOM05D006402 ORTHO05D008099 2.9e-56 222.2 150 78.0
COL.COLO4_26087 Corchorus olitorius HOM05D006402 ORTHO05D008099 2.7e-54 215.7 130 85.4
Rhsim07G0248600 Rhododendron simsii HOM05D006402 ORTHO05D008099 1.3e-53 213.4 156 73.7
Cc10_g01150 Coffea canephora HOM05D006402 ORTHO05D008099 1.8e-53 213.0 160 71.9
Lj4C17T8 Lonicera japonica HOM05D006402 ORTHO05D008099 2.3e-53 212.6 145 72.4
TAR628G1405 Trochodendron aralioides HOM05D006402 ORTHO05D008099 3.9e-53 211.8 156 70.5
Sed0012705 Sechium edule HOM05D006402 ORTHO05D008099 1.9e-52 209.5 154 71.4
Manes.05G142900 Manihot esculenta HOM05D006402 ORTHO05D008099 3.3e-52 208.8 132 84.8
AUR62016156 Chenopodium quinoa HOM05D006402 ORTHO05D008099 4.3e-52 208.4 123 82.9
Duzib093G1673 Durio zibethinus HOM05D006402 ORTHO05D008099 5.6e-52 208.0 131 81.7
Sc02g0008870 Simmondsia chinensis HOM05D006402 ORTHO05D008099 7.4e-52 207.6 123 83.7
Gohir.A06G001000 Gossypium hirsutum HOM05D006402 ORTHO05D008099 9.6e-52 207.2 126 81.7
AUR62036301 Chenopodium quinoa HOM05D006402 ORTHO05D008099 1.3e-51 206.8 123 82.9
Nitab4.5_0003030g0100 Nicotiana tabacum HOM05D006402 ORTHO05D008099 1.3e-51 206.8 159 68.6
MSTRG.1145 Avicennia marina HOM05D006402 ORTHO05D008099 1.6e-51 206.5 154 70.1
Gorai.006G031900 Gossypium raimondii HOM05D006402 ORTHO05D008099 6.2e-51 204.5 140 76.4
Peaxi162Scf00174g00075 Petunia axillaris HOM05D006402 ORTHO05D008099 6.2e-51 204.5 150 69.3
Sed0017306 Sechium edule HOM05D006402 ORTHO05D008099 1.1e-50 203.8 129 77.5
DCAR_007723 Daucus carota HOM05D006402 ORTHO05D008099 1.4e-50 203.4 153 66.0
SalBow6G2408 Salvia bowleyana HOM05D006402 ORTHO05D008099 1.4e-50 203.4 129 77.5
Nn6g34597 Nelumbo nucifera HOM05D006402 ORTHO05D008099 1.8e-50 203.0 167 65.9
PGR142G1353 Punica granatum HOM05D006402 ORTHO05D008099 1.8e-50 203.0 125 83.2
Gohir.A09G028000 Gossypium hirsutum HOM05D006402 ORTHO05D008099 2.4e-50 202.6 126 81.0
HanXRQChr14g0429471 Helianthus annuus HOM05D006402 ORTHO05D008099 3.1e-50 202.2 154 67.5
Ciclev10002722m.g Citrus clementina HOM05D006402 ORTHO05D008099 4.0e-50 201.8 128 78.9
MELO3C011341.2 Cucumis melo HOM05D006402 ORTHO05D008099 4.0e-50 201.8 141 71.6
ECA238G1428 Erigeron canadensis HOM05D006402 ORTHO05D008099 6.9e-50 201.1 129 76.7
Gorai.010G001200 Gossypium raimondii HOM05D006402 ORTHO05D008099 6.9e-50 201.1 126 80.2
SalBow7G2419 Salvia bowleyana HOM05D006402 ORTHO05D008099 6.9e-50 201.1 129 76.7
Haze_22699 Corylus avellana HOM05D006402 ORTHO05D008099 1.2e-49 200.3 131 80.2
EL10Ac1g02084 Beta vulgaris HOM05D006402 ORTHO05D008099 1.5e-49 199.9 123 78.0
Cfa014004 Carpinus fangiana HOM05D006402 ORTHO05D008099 2.0e-49 199.5 131 79.4
CiPaw.08G069100 Carya illinoinensis HOM05D006402 ORTHO05D008099 2.0e-49 199.5 130 78.5
Migut.C00897 Erythranthe guttata HOM05D006402 ORTHO05D008099 2.0e-49 199.5 147 72.1
Solyc04g081940.3 Solanum lycopersicum HOM05D006402 ORTHO05D008099 2.0e-49 199.5 153 66.7
ClCG08G014030 Citrullus lanatus HOM05D006402 ORTHO05D008099 2.6e-49 199.1 123 79.7
Sopen04g035580 Solanum pennellii HOM05D006402 ORTHO05D008099 2.6e-49 199.1 153 66.7
PGSC0003DMG400009954 Solanum tuberosum HOM05D006402 ORTHO05D008099 3.4e-49 198.7 153 67.3
CANSAT25G3089 Cannabis sativa HOM05D006402 ORTHO05D008099 4.5e-49 198.4 133 76.7
Potri.002G016600 Populus trichocarpa HOM05D006402 ORTHO05D008099 4.5e-49 198.4 139 70.5
Sopen02g030620 Solanum pennellii HOM05D006402 ORTHO05D008099 4.5e-49 198.4 153 66.7
CAN.G311.71 Capsicum annuum HOM05D006402 ORTHO05D008099 5.8e-49 198.0 153 67.3
MD08G1008000 Malus domestica HOM05D006402 ORTHO05D008099 5.8e-49 198.0 130 78.5
Aqoxy6G00455 Aquilegia oxysepala HOM05D006402 ORTHO05D008099 1.3e-48 196.8 129 75.2
Sc02g0008830 Simmondsia chinensis HOM05D006402 ORTHO05D008099 1.3e-48 196.8 123 80.5
unitig_32.g11245 Utricularia gibba HOM05D006402 ORTHO05D008099 1.3e-48 196.8 124 78.2
Solyc02g085937.1 Solanum lycopersicum HOM05D006402 ORTHO05D008099 6.5e-48 194.5 153 65.4
QL02p012927 Quercus lobata HOM05D006402 ORTHO05D008099 1.1e-47 193.7 131 75.6
Prupe.1G359800 Prunus persica HOM05D006402 ORTHO05D008099 1.9e-47 193.0 130 77.7
Sabra02G0013300 Salix brachista HOM05D006402 ORTHO05D008099 1.9e-47 193.0 122 77.0
PGSC0003DMG400012651 Solanum tuberosum HOM05D006402 ORTHO05D008099 1.9e-47 193.0 129 72.1
SGA_v2.0_scaffold292G47394 Striga asiatica HOM05D006402 ORTHO05D008099 2.5e-47 192.6 155 65.2
Carub.0002s2294 Capsella rubella HOM05D006402 ORTHO05D008099 3.2e-47 192.2 146 69.9
Thecc.08G051300 Theobroma cacao HOM05D006402 ORTHO05D008099 4.2e-47 191.8 131 77.1
arahy.Tifrunner.gnm1.ann1.KWDT0T Arachis hypogaea HOM05D006402 ORTHO05D008099 5.5e-47 191.4 125 74.4
AL2G36080 Arabidopsis lyrata HOM05D006402 ORTHO05D008099 9.3e-47 190.7 146 69.9
Aa31LG4G6170 Aethionema arabicum HOM05D006402 ORTHO05D008099 1.2e-46 190.3 147 66.7
Cpa.g.sc81.101 Carica papaya HOM05D006402 ORTHO05D008099 1.2e-46 190.3 128 77.3
A02p20400 Brassica napus HOM05D006402 ORTHO05D008099 3.5e-46 188.7 126 75.4
Sp5g31180 Schrenkiella parvula HOM05D006402 ORTHO05D008099 6.0e-46 188.0 128 74.2
PSO675G2459 Papaver somniferum HOM05D006402 ORTHO05D008099 7.9e-46 187.6 129 72.9
CARHR069600 Cardamine hirsuta HOM05D006402 ORTHO05D008099 1.8e-45 186.4 146 65.8
Atru.chr13.220 Acer truncatum HOM05D006402 ORTHO05D008099 2.3e-45 186.0 131 74.0
BcaC08g47098 Brassica carinata HOM05D006402 ORTHO05D008099 2.3e-45 186.0 146 65.8
Thhalv10019271m.g Eutrema salsugineum HOM05D006402 ORTHO05D008099 3.0e-45 185.7 146 68.5
arahy.Tifrunner.gnm1.ann1.R93WT9 Arachis hypogaea HOM05D006402 ORTHO05D008099 3.9e-45 185.3 125 72.8
AT1G76060 Arabidopsis thaliana HOM05D006402 ORTHO05D008099 5.1e-45 184.9 146 67.8
MBI03_g11314_MAGBIO Magnolia biondii HOM05D006402 ORTHO05D008099 5.1e-45 184.9 129 69.8
TWI14G1330 Tripterygium wilfordii HOM05D006402 ORTHO05D008099 5.1e-45 184.9 131 73.3
PSO541G5119 Papaver somniferum HOM05D006402 ORTHO05D008099 1.1e-44 183.7 126 72.2
Ca_13483_v3 Cicer arietinum L. HOM05D006402 ORTHO05D008099 9.7e-44 180.6 123 71.5
A07p41620 Brassica napus HOM05D006402 ORTHO05D008099 1.3e-43 180.3 142 66.2
BraA07t31691Z Brassica rapa HOM05D006402 ORTHO05D008099 1.3e-43 180.3 142 66.2
BolC6t40039H Brassica oleracea HOM05D006402 ORTHO05D008099 2.2e-43 179.5 124 74.2
THA.LOC104811442 Tarenaya hassleriana HOM05D006402 ORTHO05D008099 2.2e-43 179.5 126 73.0
C06p50000 Brassica napus HOM05D006402 ORTHO05D008099 6.3e-43 177.9 124 73.4
CDE05G2406 Ceratophyllum demersum HOM05D000228 ORTHO05D001122 8.2e-43 177.6 128 69.5
Eucgr.F01698 Eucalyptus grandis HOM05D006402 ORTHO05D008099 1.1e-42 177.2 126 71.4
CsaV3_2G024420 Cucumis sativus L. HOM05D006402 ORTHO05D008099 1.4e-42 176.8 129 70.5
ATR0580G246 Amborella trichopoda HOM05D006402 ORTHO05D008099 1.8e-42 176.4 133 70.7
Lalb_Chr23g0266011 Lupinus albus HOM05D006402 ORTHO05D008099 2.4e-42 176.0 133 65.4
RcHm_v2.0_Chr6g0303641 Rosa chinensis HOM05D006402 ORTHO05D008099 2.4e-42 176.0 130 73.1
HPP92_013449 Vanilla planifolia HOM05D006402 ORTHO05D008099 2.4e-42 176.0 122 70.5
FAN20G3208 Fragaria x ananassa HOM05D006402 ORTHO05D008099 4.1e-42 175.3 142 68.3
ATR0680G026 Amborella trichopoda HOM05D006402 ORTHO05D008099 6.9e-42 174.5 133 69.9
FAN27G3062 Fragaria x ananassa HOM05D006402 ORTHO05D008099 3.4e-41 172.2 141 67.4
FvH4_2g37980 Fragaria vesca HOM05D006402 ORTHO05D008099 4.5e-41 171.8 141 66.7
Gohir.D09G027401 Gossypium hirsutum HOM05D006402 ORTHO05D008099 7.6e-41 171.0 126 70.6
Lsat_1_v5_gn_2_6761 Lactuca sativa HOM05D006402 ORTHO05D008099 1.3e-40 170.2 154 60.4
Actinidia29765 Actinidia chinensis HOM05D006402 ORTHO05D008099 1.7e-40 169.9 156 60.9
Phvul.001G003000 Phaseolus vulgaris HOM05D006402 ORTHO05D008099 1.7e-40 169.9 120 70.0
VMungo0647G0728 Vigna mungo HOM05D006402 ORTHO05D008099 2.2e-40 169.5 122 69.7
Glyma.17G261100 Glycine max HOM05D006402 ORTHO05D008099 3.8e-40 168.7 119 68.9
TPR.G26406 Trifolium pratense HOM05D006402 ORTHO05D008099 8.5e-40 167.5 143 61.5
Lj5g0026723 Lotus japonicus HOM05D006402 ORTHO05D008099 1.4e-39 166.8 128 65.6
Psat6g001160 Pisum sativum HOM05D006402 ORTHO05D008099 5.5e-39 164.9 128 65.6
Glyma.09G042800 Glycine max HOM05D006402 ORTHO05D008099 1.2e-38 163.7 119 66.4
SEGI_22650 Sequoiadendron giganteum HOM05D006402 ORTHO05D008099 7.9e-38 161.0 130 64.6
Medtr1g026078 Medicago truncatula HOM05D006402 ORTHO05D008099 1.0e-37 160.6 136 61.0
SHI08020 Sapria himalayana HOM05D006402 ORTHO05D008099 8.8e-37 157.5 122 64.8
Zm00001eb002920 Zea mays HOM05D006402 ORTHO05D008099 1.1e-34 150.6 124 61.3
BcaC03g15641 Brassica carinata HOM05D006402 ORTHO05D008099 3.1e-34 149.1 130 63.1
Os03g0136600 Oryza sativa ssp. japonica HOM05D006402 ORTHO05D008099 6.9e-34 147.9 128 57.8
Pp3c14_25160 Physcomitrium patens HOM05D006402 ORTHO05D008099 4.4e-28 128.6 122 52.5
BolC2t09355H Brassica oleracea HOM05D006402 ORTHO05D008099 5.7e-28 128.3 128 56.2
C02p33500 Brassica napus HOM05D006402 ORTHO05D008099 7.4e-28 127.9 128 56.2
BraA02t07072Z Brassica rapa HOM05D006402 ORTHO05D008099 2.2e-27 126.3 80 78.8
SMO358G0213 Selaginella moellendorffii HOM05D006402 ORTHO05D008099 4.1e-26 122.1 124 47.6
Mapoly0186s0006 Marchantia polymorpha HOM05D006402 ORTHO05D008099 1.5e-25 120.2 131 51.1
AagrBONN_evm.TU.Sc2ySwM_228.4698 Anthoceros agrestis HOM05D006402 ORTHO05D008099 1.7e-24 116.7 125 52.0
BcaC08g47099 Brassica carinata HOM05D006402 ORTHO05D008099 1.7e-24 116.7 94 62.8
CBR_g51533 Chara braunii HOM05D006402 ORTHO05D008099 2.1e-22 109.8 132 44.7
PRCOL_00001167 Prasinoderma coloniale HOM05D006402 ORTHO05D008099 3.6e-22 109.0 119 50.4
QL08p014343 Quercus lobata HOM05D006402 ORTHO05D008099 1.4e-21 107.1 137 46.7
MD15G1006900 Malus domestica HOM05D006402 ORTHO05D008099 3.7e-19 99.0 94 61.7
Eucgr.F01697 Eucalyptus grandis HOM05D006402 ORTHO05D008099 5.3e-18 95.1 98 51.0
MCO02G370 Micromonas commoda HOM05D006402 ORTHO05D008099 2.0e-17 93.2 80 55.0
Cre01.g028150 Chlamydomonas reinhardtii HOM05D006402 ORTHO05D008099 3.5e-17 92.4 111 45.0
BcaC08g47297 Brassica carinata HOM05D006402 ORTHO05D008099 1.2e-14 84.0 123 42.3
Sed0026898 Sechium edule HOM05D006402 ORTHO05D008099 1.6e-14 83.6 120 41.7
Glyma.14G222200 Glycine max HOM05D006402 ORTHO05D008099 2.8e-11 72.8 58 67.2
BcaB05g24967 Brassica carinata HOM05D000901 ORTHO05D001160 3.8e-08 62.4 49 69.4


User provided reference genes

Program Settings