Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv18359 Davidia involucrata HOM05D005597 ORTHO05D007304 8.9e-207 723.4 372 100.0
Dinv14987 Davidia involucrata HOM05D005597 ORTHO05D007304 6.2e-176 620.9 372 87.1
CSS0014594 Camellia sinensis var. sinensis HOM05D005597 ORTHO05D007304 2.0e-166 589.3 369 82.1
Rhsim06G0207300 Rhododendron simsii HOM05D005597 ORTHO05D007304 2.5e-164 582.4 372 80.4
Hma1.2p1_1016F.1_g248140 Hydrangea macrophylla HOM05D005597 ORTHO05D007304 7.9e-163 577.4 372 80.6
Hma1.2p1_1016F.1_g248150 Hydrangea macrophylla HOM05D005597 ORTHO05D007304 1.5e-161 573.2 369 80.8
Actinidia12571 Actinidia chinensis HOM05D005597 ORTHO05D007304 5.7e-161 571.2 372 78.2
TAR624G0947 Trochodendron aralioides HOM05D005597 ORTHO05D007304 2.1e-160 569.3 372 79.3
Manes.03G102000 Manihot esculenta HOM05D005597 ORTHO05D007304 1.8e-159 566.2 372 78.2
TAR626G0744 Trochodendron aralioides HOM05D005597 ORTHO05D007304 2.4e-159 565.8 372 78.5
Lj8A149T49 Lonicera japonica HOM05D005597 ORTHO05D007304 5.3e-159 564.7 374 79.7
CiPaw.11G160900 Carya illinoinensis HOM05D005597 ORTHO05D007304 1.2e-158 563.5 374 77.8
Atru.chr2.2174 Acer truncatum HOM05D005597 ORTHO05D007304 1.5e-158 563.1 377 78.0
Thecc.07G110000 Theobroma cacao HOM05D005597 ORTHO05D007304 3.4e-158 562.0 380 77.6
Gohir.A13G149000 Gossypium hirsutum HOM05D005597 ORTHO05D007304 5.9e-158 561.2 377 77.5
Duzib213G0141 Durio zibethinus HOM05D005597 ORTHO05D007304 2.9e-157 558.9 380 77.4
TWI39G1070 Tripterygium wilfordii HOM05D005597 ORTHO05D007304 2.9e-157 558.9 373 78.0
Gorai.013G173400 Gossypium raimondii HOM05D005597 ORTHO05D007304 3.8e-157 558.5 377 77.5
COL.COLO4_17568 Corchorus olitorius HOM05D005597 ORTHO05D007304 5.0e-157 558.1 355 80.0
FAN21G1763 Fragaria x ananassa HOM05D005597 ORTHO05D007304 8.5e-157 557.4 372 78.0
FAN11G3052 Fragaria x ananassa HOM05D005597 ORTHO05D007304 1.9e-156 556.2 372 78.0
FvH4_3g18450 Fragaria vesca HOM05D005597 ORTHO05D007304 3.2e-156 555.4 372 78.0
TWI38G1600 Tripterygium wilfordii HOM05D005597 ORTHO05D007304 7.2e-156 554.3 372 77.2
Duzib187G0678 Durio zibethinus HOM05D005597 ORTHO05D007304 1.6e-155 553.1 379 76.8
Nn1g09131 Nelumbo nucifera HOM05D005597 ORTHO05D007304 2.1e-155 552.7 372 77.4
Cfa019573 Carpinus fangiana HOM05D005597 ORTHO05D007304 3.6e-155 552.0 375 77.9
arahy.Tifrunner.gnm1.ann1.06PSEJ Arachis hypogaea HOM05D005597 ORTHO05D007304 2.3e-154 549.3 374 75.9
SGA_v2.0_scaffold47G17797 Striga asiatica HOM05D005597 ORTHO05D007304 3.0e-154 548.9 372 76.3
Ciclev10019496m.g Citrus clementina HOM05D005597 ORTHO05D007304 3.9e-154 548.5 376 75.3
CANSAT35G0471 Cannabis sativa HOM05D005597 ORTHO05D007304 5.1e-154 548.1 375 76.5
THA.LOC104812323 Tarenaya hassleriana HOM05D005597 ORTHO05D007304 8.7e-154 547.4 374 75.4
CsaV3_4G033140 Cucumis sativus L. HOM05D005597 ORTHO05D007304 1.1e-153 547.0 372 74.7
arahy.Tifrunner.gnm1.ann1.Z1JPC4 Arachis hypogaea HOM05D005597 ORTHO05D007304 1.9e-153 546.2 374 75.4
QL08p026520 Quercus lobata HOM05D005597 ORTHO05D007304 1.9e-153 546.2 377 75.3
MD03G1241900 Malus domestica HOM05D005597 ORTHO05D007304 4.3e-153 545.0 377 76.1
ClCG11G017480 Citrullus lanatus HOM05D005597 ORTHO05D007304 5.7e-153 544.7 372 74.5
Potri.011G110800 Populus trichocarpa HOM05D005597 ORTHO05D007304 3.7e-152 542.0 372 75.5
CAN.G162.8 Capsicum annuum HOM05D005597 ORTHO05D007304 8.2e-152 540.8 370 74.3
FAN16G1691 Fragaria x ananassa HOM05D005597 ORTHO05D007304 8.2e-152 540.8 380 75.3
Sabra11G0098300 Salix brachista HOM05D005597 ORTHO05D007304 1.1e-151 540.4 351 79.2
MSTRG.12867 Avicennia marina HOM05D005597 ORTHO05D007304 4.1e-151 538.5 350 77.4
SalBow7G0883 Salvia bowleyana HOM05D005597 ORTHO05D007304 2.0e-150 536.2 372 74.2
Prupe.4G166500 Prunus persica HOM05D005597 ORTHO05D007304 2.6e-150 535.8 372 74.7
PGR083G2138 Punica granatum HOM05D005597 ORTHO05D007304 2.6e-150 535.8 372 73.9
PGSC0003DMG400012388 Solanum tuberosum HOM05D005597 ORTHO05D007304 1.7e-149 533.1 371 73.6
Phvul.005G066500 Phaseolus vulgaris HOM05D005597 ORTHO05D007304 2.2e-149 532.7 373 74.0
Solyc07g062540.3 Solanum lycopersicum HOM05D005597 ORTHO05D007304 2.2e-149 532.7 371 73.3
VMungo1080G1355 Vigna mungo HOM05D005597 ORTHO05D007304 2.2e-149 532.7 373 73.5
Lj3g0024865 Lotus japonicus HOM05D005597 ORTHO05D007304 2.9e-149 532.3 373 73.7
Sopen07g030770 Solanum pennellii HOM05D005597 ORTHO05D007304 3.8e-149 531.9 371 73.6
MD11G1261800 Malus domestica HOM05D005597 ORTHO05D007304 5.0e-149 531.6 374 74.6
CARHR017370 Cardamine hirsuta HOM05D005597 ORTHO05D007304 6.5e-149 531.2 375 73.1
Hund10564 Selenicereus undatus HOM05D005597 ORTHO05D007304 6.5e-149 531.2 374 74.1
RcHm_v2.0_Chr5g0031201 Rosa chinensis HOM05D005597 ORTHO05D007304 8.5e-149 530.8 375 74.7
Ca_03990_v3 Cicer arietinum L. HOM05D005597 ORTHO05D007304 1.4e-148 530.0 367 74.7
Aqoxy1G02067 Aquilegia oxysepala HOM05D005597 ORTHO05D007304 4.2e-148 528.5 373 72.4
Sc03g0010510 Simmondsia chinensis HOM05D005597 ORTHO05D007304 1.2e-147 526.9 375 73.1
Migut.H01992 Erythranthe guttata HOM05D005597 ORTHO05D007304 2.1e-147 526.2 372 72.8
Medtr2g076680 Medicago truncatula HOM05D005597 ORTHO05D007304 2.1e-147 526.2 368 73.6
AT1G16900 Arabidopsis thaliana HOM05D005597 ORTHO05D007304 2.7e-147 525.8 369 72.1
BcaC05g25546 Brassica carinata HOM05D005597 ORTHO05D007304 3.6e-147 525.4 369 72.1
BolC5t30227H Brassica oleracea HOM05D005597 ORTHO05D007304 3.6e-147 525.4 369 72.1
Carub.0001s1664 Capsella rubella HOM05D005597 ORTHO05D007304 3.6e-147 525.4 369 72.6
BraA06t24441Z Brassica rapa HOM05D005597 ORTHO05D007304 4.6e-147 525.0 369 72.1
A06p12800 Brassica napus HOM05D005597 ORTHO05D007304 6.1e-147 524.6 369 71.5
AL1G29070 Arabidopsis lyrata HOM05D005597 ORTHO05D007304 7.9e-147 524.2 369 72.9
C05p15120 Brassica napus HOM05D005597 ORTHO05D007304 7.9e-147 524.2 369 72.1
A08p31230 Brassica napus HOM05D005597 ORTHO05D007304 1.0e-146 523.9 369 71.8
BraA08t35046Z Brassica rapa HOM05D005597 ORTHO05D007304 1.0e-146 523.9 369 71.8
Glyma.13G270500 Glycine max HOM05D005597 ORTHO05D007304 3.0e-146 522.3 334 77.2
BcaC07g38821 Brassica carinata HOM05D005597 ORTHO05D007304 3.9e-146 521.9 372 71.0
C08p17610 Brassica napus HOM05D005597 ORTHO05D007304 3.9e-146 521.9 372 71.0
BcaB02g06666 Brassica carinata HOM05D005597 ORTHO05D007304 5.1e-146 521.5 370 71.1
Glyma.12G229300 Glycine max HOM05D005597 ORTHO05D007304 6.7e-146 521.2 334 76.9
Sp1g15040 Schrenkiella parvula HOM05D005597 ORTHO05D007304 1.1e-145 520.4 369 71.3
Thhalv10007218m.g Eutrema salsugineum HOM05D005597 ORTHO05D007304 2.6e-145 519.2 369 71.5
Lalb_Chr01g0006811 Lupinus albus HOM05D005597 ORTHO05D007304 3.3e-145 518.8 370 71.4
Psat5g238320 Pisum sativum HOM05D005597 ORTHO05D007304 4.4e-145 518.5 372 73.1
MBI07_g03181_MAGBIO Magnolia biondii HOM05D005597 ORTHO05D007304 1.3e-144 516.9 361 74.5
CSS0003229 Camellia sinensis var. sinensis HOM05D005597 ORTHO05D007304 1.7e-144 516.5 368 75.0
TPR.G19385 Trifolium pratense HOM05D005597 ORTHO05D007304 2.8e-144 515.8 367 72.5
EL10Ac4g08334 Beta vulgaris HOM05D005597 ORTHO05D007304 5.3e-143 511.5 375 72.5
Eucgr.F01228 Eucalyptus grandis HOM05D005597 ORTHO05D007304 5.3e-143 511.5 376 72.1
AUR62043187 Chenopodium quinoa HOM05D005597 ORTHO05D007304 2.0e-142 509.6 353 74.5
Sed0009860 Sechium edule HOM05D005597 ORTHO05D007304 4.5e-142 508.4 330 76.7
BcaB03g13027 Brassica carinata HOM05D005597 ORTHO05D007304 7.7e-142 507.7 347 72.3
ECA240G4584 Erigeron canadensis HOM05D000832 ORTHO05D000982 3.8e-141 505.4 376 71.5
BolC8t49386H Brassica oleracea HOM05D005597 ORTHO05D007304 5.0e-141 505.0 372 69.1
HanXRQChr14g0442721 Helianthus annuus HOM05D005597 ORTHO05D007304 5.0e-141 505.0 378 71.4
GSVIVG01014208001 Vitis vinifera HOM05D005597 ORTHO05D007304 1.9e-140 503.1 313 80.8
FAN25G0069 Fragaria x ananassa HOM05D005597 ORTHO05D007304 2.7e-139 499.2 355 74.4
CDE02G4663 Ceratophyllum demersum HOM05D005597 ORTHO05D007304 1.0e-138 497.3 371 69.8
Lsat_1_v5_gn_9_100260 Lactuca sativa HOM05D005597 ORTHO05D007304 1.8e-138 496.5 375 68.3
vmacro11932 Vaccinium macrocarpon HOM05D005597 ORTHO05D007304 8.8e-138 494.2 393 66.2
PSO500G0209 Papaver somniferum HOM05D005597 ORTHO05D007304 1.7e-136 490.0 378 67.2
PSO675G3712 Papaver somniferum HOM05D005597 ORTHO05D007304 2.8e-136 489.2 378 67.2
Cc05_g11200 Coffea canephora HOM05D005597 ORTHO05D007304 8.2e-136 487.6 313 78.3
ATR0602G238 Amborella trichopoda HOM05D005597 ORTHO05D007304 3.1e-135 485.7 375 67.7
Os01g0209000 Oryza sativa ssp. japonica HOM05D005597 ORTHO05D007304 3.0e-130 469.2 331 72.5
Ah.06g185290 Amaranthus hybridus HOM05D005597 ORTHO05D007304 5.2e-130 468.4 379 67.0
Zm00001eb120330 Zea mays HOM05D005597 ORTHO05D007304 1.1e-127 460.7 348 69.0
Aa31LG7G1320 Aethionema arabicum HOM05D005597 ORTHO05D007304 2.0e-126 456.4 372 66.1
unitig_749.g13539 Utricularia gibba HOM05D005597 ORTHO05D007304 1.0e-125 454.1 374 65.5
SHI21382 Sapria himalayana HOM05D005597 ORTHO05D007304 1.2e-123 447.2 381 63.3
Haze_09335 Corylus avellana HOM05D005597 ORTHO05D007304 8.0e-123 444.5 460 58.7
HPP92_004052 Vanilla planifolia HOM05D005597 ORTHO05D007304 5.2e-114 415.2 399 58.4
DCAR_013152 Daucus carota HOM05D005597 ORTHO05D007304 5.9e-110 401.7 282 75.2
AUR62019570 Chenopodium quinoa HOM05D005597 ORTHO05D007304 3.6e-107 392.5 284 72.9
Mapoly0059s0091 Marchantia polymorpha HOM05D005597 ORTHO05D007304 2.0e-102 376.7 334 57.8
Nitab4.5_0001145g0050 Nicotiana tabacum HOM05D005597 ORTHO05D007304 4.6e-102 375.6 282 72.0
Duzib213G0888 Durio zibethinus HOM05D005597 ORTHO05D007304 2.8e-99 366.3 248 77.4
SMO143G0166 Selaginella moellendorffii HOM05D005597 ORTHO05D007304 3.6e-91 339.3 338 54.1
Cpa.g.sc97.103 Carica papaya HOM05D005597 ORTHO05D007304 4.0e-90 335.9 221 77.8
Pp3c6_16240 Physcomitrium patens HOM05D005597 ORTHO05D007304 6.8e-90 335.1 332 56.6
MELO3C025637.2 Cucumis melo HOM05D005597 ORTHO05D007304 3.4e-89 332.8 233 73.4
Peaxi162Scf00069g02235 Petunia axillaris HOM05D005597 ORTHO05D007304 7.5e-89 331.6 372 52.2
Nitab4.5_0000246g0240 Nicotiana tabacum HOM05D005597 ORTHO05D007304 2.4e-87 326.6 256 70.3
AagrBONN_evm.TU.Sc2ySwM_228.833 Anthoceros agrestis HOM05D005597 ORTHO05D007304 1.1e-82 311.2 364 50.5
Gohir.D13G153500 Gossypium hirsutum HOM05D005597 ORTHO05D007304 1.5e-81 307.4 208 77.4
CBR_g38668 Chara braunii HOM05D005597 ORTHO05D007304 1.2e-75 287.7 331 47.4
Oeu059263.1 Olea europaea HOM05D005597 ORTHO05D007304 7.4e-60 235.3 165 70.9
Gohir.A07G160600 Gossypium hirsutum HOM05D005597 ORTHO05D007304 1.7e-56 224.2 150 76.7
Gohir.A04G098250 Gossypium hirsutum HOM05D005597 ORTHO05D007304 6.4e-56 222.2 153 73.9
Gohir.A03G066250 Gossypium hirsutum HOM05D005597 ORTHO05D007304 1.1e-52 211.5 141 76.6
Lsat_1_v5_gn_9_21740 Lactuca sativa HOM05D005597 ORTHO05D007174 5.3e-42 176.0 193 58.0
COL.COLO4_17572 Corchorus olitorius HOM05D005597 ORTHO05D007304 1.3e-40 171.4 138 67.4
Cfa025275 Carpinus fangiana HOM05D005597 ORTHO05D028637 1.0e-37 161.8 321 36.8
MCO07G083 Micromonas commoda HOM05D005597 ORTHO05D007304 9.1e-34 148.7 369 35.8
PRCOL_00005636 Prasinoderma coloniale HOM05D005597 ORTHO05D007304 4.5e-33 146.4 349 31.8
Actinidia24363 Actinidia chinensis HOM05D005597 ORTHO05D007304 1.1e-31 141.7 91 76.9
SEGI_23731 Sequoiadendron giganteum HOM05D005597 ORTHO05D007304 5.3e-18 96.3 71 60.6
MBI01_g45400_MAGBIO Magnolia biondii HOM05D005597 ORTHO05D010488 2.9e-16 90.5 50 76.0
MBI01_g45631_MAGBIO Magnolia biondii HOM05D005597 ORTHO05D010488 3.8e-16 90.1 63 61.9
Lsat_1_v5_gn_3_114580 Lactuca sativa HOM05D002100 ORTHO05D002310 8.8e-13 79.0 59 74.6


User provided reference genes

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