Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv18253 Davidia involucrata HOM05D004897 ORTHO05D005928 2.0e-298 1028.5 569 100.0
Hma1.2p1_0669F.1_g200180 Hydrangea macrophylla HOM05D004897 ORTHO05D005928 3.2e-163 579.3 542 67.2
CSS0030961 Camellia sinensis var. sinensis HOM05D004897 ORTHO05D005928 1.6e-154 550.4 544 65.8
Actinidia35124 Actinidia chinensis HOM05D004897 ORTHO05D005928 3.2e-139 499.6 545 60.6
Actinidia18901 Actinidia chinensis HOM05D004897 ORTHO05D005928 1.3e-137 494.2 543 60.4
Lj9C421G3 Lonicera japonica HOM05D004897 ORTHO05D005928 2.9e-132 476.5 544 59.2
Dinv10174 Davidia involucrata HOM05D004897 ORTHO05D005928 4.9e-132 475.7 373 79.9
RcHm_v2.0_Chr7g0178571 Rosa chinensis HOM05D004897 ORTHO05D005928 2.3e-129 466.8 539 59.0
Rhsim12G0138900 Rhododendron simsii HOM05D004897 ORTHO05D005928 3.0e-129 466.5 550 58.7
TAR622G0961 Trochodendron aralioides HOM05D004897 ORTHO05D005928 1.6e-127 460.7 550 57.6
Cfa019677 Carpinus fangiana HOM05D004897 ORTHO05D005928 2.8e-127 459.9 548 57.7
Duzib084G0246 Durio zibethinus HOM05D004897 ORTHO05D005928 8.2e-127 458.4 546 56.4
MD06G1230800 Malus domestica HOM05D004897 ORTHO05D005928 1.2e-125 454.5 539 57.5
Prupe.5G232100 Prunus persica HOM05D004897 ORTHO05D005928 1.2e-125 454.5 538 58.4
Oeu014377.2 Olea europaea HOM05D004897 ORTHO05D005928 1.5e-125 454.1 550 53.8
MSTRG.4571 Avicennia marina HOM05D004897 ORTHO05D005928 1.0e-124 451.4 542 56.6
QL10p028331 Quercus lobata HOM05D004897 ORTHO05D005928 2.2e-124 450.3 546 57.7
QL10p028216 Quercus lobata HOM05D004897 ORTHO05D005928 2.9e-124 449.9 546 57.7
Migut.D01558 Erythranthe guttata HOM05D004897 ORTHO05D005928 8.5e-124 448.4 476 59.0
FAN13G1819 Fragaria x ananassa HOM05D004897 ORTHO05D005928 7.2e-123 445.3 537 56.1
FAN04G2242 Fragaria x ananassa HOM05D004897 ORTHO05D005928 2.7e-122 443.4 538 55.9
Thecc.03G053700 Theobroma cacao HOM05D004897 ORTHO05D005928 2.7e-122 443.4 548 56.0
CiPaw.15G140900 Carya illinoinensis HOM05D004897 ORTHO05D005928 3.6e-122 443.0 549 57.6
MD14G1235400 Malus domestica HOM05D004897 ORTHO05D005928 3.6e-122 443.0 538 56.3
Potri.015G039800 Populus trichocarpa HOM05D004897 ORTHO05D005928 3.9e-121 439.5 538 56.1
FAN18G0124 Fragaria x ananassa HOM05D004897 ORTHO05D005928 6.7e-121 438.7 537 55.3
Glyma.05G244800 Glycine max HOM05D004897 ORTHO05D005928 3.3e-120 436.4 546 56.8
Sabra15G0057300 Salix brachista HOM05D004897 ORTHO05D005928 4.8e-119 432.6 538 56.1
Glyma.08G053300 Glycine max HOM05D004897 ORTHO05D005928 1.1e-118 431.4 548 56.4
Ciclev10007731m.g Citrus clementina HOM05D004897 ORTHO05D005928 3.1e-118 429.9 548 56.0
Haze_18817 Corylus avellana HOM05D004897 ORTHO05D005928 6.9e-118 428.7 609 51.6
FAN08G3076 Fragaria x ananassa HOM05D004897 ORTHO05D005928 6.9e-118 428.7 535 55.0
Gohir.A12G268700 Gossypium hirsutum HOM05D004897 ORTHO05D005928 3.4e-117 426.4 548 54.6
Nn4g24194 Nelumbo nucifera HOM05D004897 ORTHO05D005928 5.9e-117 425.6 555 51.4
DCAR_014009 Daucus carota HOM05D004897 ORTHO05D005928 1.3e-116 424.5 460 60.4
Manes.14G170400 Manihot esculenta HOM05D004897 ORTHO05D005928 2.9e-116 423.3 548 53.3
Gohir.D12G269100 Gossypium hirsutum HOM05D004897 ORTHO05D005928 1.1e-115 421.4 550 54.0
Gorai.008G289400 Gossypium raimondii HOM05D004897 ORTHO05D005928 1.1e-115 421.4 550 54.0
Gohir.A09G175700 Gossypium hirsutum HOM05D004897 ORTHO05D005928 5.5e-115 419.1 539 53.6
Phvul.002G329100 Phaseolus vulgaris HOM05D004897 ORTHO05D005928 7.2e-115 418.7 549 53.4
TWI81G0456 Tripterygium wilfordii HOM05D004897 ORTHO05D005928 9.4e-115 418.3 545 52.7
TWI60G0918 Tripterygium wilfordii HOM05D004897 ORTHO05D005928 7.9e-114 415.2 546 54.8
Medtr8g107060 Medicago truncatula HOM05D004897 ORTHO05D005928 1.8e-113 414.1 494 55.7
PGSC0003DMG400005743 Solanum tuberosum HOM05D004897 ORTHO05D005928 1.8e-113 414.1 384 63.8
SalBow1G4576 Salvia bowleyana HOM05D004897 ORTHO05D005928 3.9e-113 412.9 385 62.6
CAN.G1129.49 Capsicum annuum HOM05D004897 ORTHO05D005928 4.4e-112 409.5 541 52.7
Cc04_g06380 Coffea canephora HOM05D004897 ORTHO05D005928 7.4e-112 408.7 542 53.7
VMungo0251G1788 Vigna mungo HOM05D004897 ORTHO05D005928 7.4e-112 408.7 552 53.1
Hund02326 Selenicereus undatus HOM05D004897 ORTHO05D005928 4.8e-111 406.0 386 61.4
Nitab4.5_0006894g0040 Nicotiana tabacum HOM05D004897 ORTHO05D005928 1.4e-110 404.4 542 53.9
Eucgr.B00942 Eucalyptus grandis HOM05D004897 ORTHO05D005928 1.8e-110 404.1 546 51.1
SGA_v2.0_scaffold168G38498 Striga asiatica HOM05D004897 ORTHO05D005928 2.4e-110 403.7 493 55.2
Ca_17200_v3 Cicer arietinum L. HOM05D004897 ORTHO05D005928 1.5e-109 401.0 546 52.2
vmacro16414 Vaccinium macrocarpon HOM05D004897 ORTHO05D005928 1.0e-108 398.3 688 46.5
Nitab4.5_0001456g0120 Nicotiana tabacum HOM05D004897 ORTHO05D005928 1.7e-108 397.5 385 62.3
Lalb_Chr05g0221751 Lupinus albus HOM05D004897 ORTHO05D005928 3.8e-108 396.4 543 51.9
arahy.Tifrunner.gnm1.ann1.Y8NJDB Arachis hypogaea HOM05D004897 ORTHO05D005928 8.5e-108 395.2 550 52.9
PSO017G1741 Papaver somniferum HOM05D004897 ORTHO05D005928 8.5e-108 395.2 388 61.1
MBI12_g30398_MAGBIO Magnolia biondii HOM05D004897 ORTHO05D005928 1.9e-107 394.0 551 51.2
Psat7g002120 Pisum sativum HOM05D004897 ORTHO05D005928 4.2e-107 392.9 552 53.1
Lj4g0010445 Lotus japonicus HOM05D004897 ORTHO05D005928 7.2e-107 392.1 385 60.5
ClCG06G014390 Citrullus lanatus HOM05D004897 ORTHO05D005928 1.6e-106 391.0 531 49.3
arahy.Tifrunner.gnm1.ann1.QTT902 Arachis hypogaea HOM05D004897 ORTHO05D005928 2.7e-106 390.2 547 52.5
ECA233G2541 Erigeron canadensis HOM05D004897 ORTHO05D005928 3.6e-106 389.8 381 60.9
COL.COLO4_16135 Corchorus olitorius HOM05D004897 ORTHO05D005928 6.1e-106 389.0 546 52.7
Lalb_Chr16g0387081 Lupinus albus HOM05D004897 ORTHO05D005928 1.0e-105 388.3 549 51.5
Atru.chr9.1748 Acer truncatum HOM05D004897 ORTHO05D005928 3.0e-105 386.7 543 54.3
PSO478G0546 Papaver somniferum HOM05D004897 ORTHO05D005928 5.2e-105 386.0 388 60.3
Aqoxy3G00106 Aquilegia oxysepala HOM05D004897 ORTHO05D005928 4.1e-102 376.3 387 59.4
CsaV3_1G004270 Cucumis sativus L. HOM05D004897 ORTHO05D005928 9.1e-102 375.2 527 50.7
THA.LOC104812165 Tarenaya hassleriana HOM05D004897 ORTHO05D005928 1.2e-101 374.8 388 58.5
Lsat_1_v5_gn_8_144040 Lactuca sativa HOM05D004897 ORTHO05D005928 1.2e-98 364.8 370 58.4
Sed0018128 Sechium edule HOM05D004897 ORTHO05D005928 2.3e-97 360.5 383 56.4
AUR62042935 Chenopodium quinoa HOM05D004897 ORTHO05D005928 3.0e-97 360.1 383 55.6
PGR083G0946 Punica granatum HOM05D004897 ORTHO05D005928 3.3e-96 356.7 542 50.4
Ah.11g045250 Amaranthus hybridus HOM05D004897 ORTHO05D005928 4.4e-96 356.3 375 56.0
Sed0002019 Sechium edule HOM05D004897 ORTHO05D005928 2.2e-95 354.0 543 47.1
HanXRQChr08g0227441 Helianthus annuus HOM05D004897 ORTHO05D005928 4.8e-95 352.8 377 58.4
Sc10g0009320 Simmondsia chinensis HOM05D004897 ORTHO05D005928 8.2e-95 352.1 350 60.0
Peaxi162Scf00683g00441 Petunia axillaris HOM05D004897 ORTHO05D005928 2.4e-94 350.5 330 62.1
Carub.0001s1783 Capsella rubella HOM05D004897 ORTHO05D005928 5.3e-94 349.4 388 55.4
BcaB07g31825 Brassica carinata HOM05D004897 ORTHO05D005928 1.6e-93 347.8 388 55.7
Thhalv10007004m.g Eutrema salsugineum HOM05D004897 ORTHO05D005928 2.0e-93 347.4 388 55.2
AT1G18190 Arabidopsis thaliana HOM05D004897 ORTHO05D005928 4.5e-93 346.3 387 54.8
A06p14220 Brassica napus HOM05D004897 ORTHO05D005928 5.9e-93 345.9 388 55.9
C05p16500 Brassica napus HOM05D004897 ORTHO05D005928 5.9e-93 345.9 388 54.9
BraA06t24553Z Brassica rapa HOM05D004897 ORTHO05D005928 7.7e-93 345.5 388 55.2
BcaC05g25714 Brassica carinata HOM05D004897 ORTHO05D005928 2.2e-92 344.0 388 54.6
BolC5t30347H Brassica oleracea HOM05D004897 ORTHO05D005928 2.2e-92 344.0 388 54.6
AL1G30560 Arabidopsis lyrata HOM05D004897 ORTHO05D005928 2.5e-91 340.5 388 54.6
Sp1g16170 Schrenkiella parvula HOM05D004897 ORTHO05D005928 2.5e-91 340.5 388 54.4
CDE05G2998 Ceratophyllum demersum HOM05D004897 ORTHO05D005928 6.1e-90 335.9 389 51.4
MELO3C017351.2 Cucumis melo HOM05D004897 ORTHO05D005928 1.4e-89 334.7 525 45.1
A08p30510 Brassica napus HOM05D004897 ORTHO05D005928 1.8e-89 334.3 388 53.6
TPR.G1406 Trifolium pratense HOM05D004897 ORTHO05D005928 8.3e-87 325.5 495 51.3
Aa31LG7G2880 Aethionema arabicum HOM05D004897 ORTHO05D005928 1.1e-86 325.1 418 49.8
Cpa.g.sc3.408 Carica papaya HOM05D004897 ORTHO05D005928 3.8e-84 316.6 437 55.1
BcaC07g38902 Brassica carinata HOM05D004897 ORTHO05D005928 2.4e-78 297.4 366 50.0
BraA08t34983Z Brassica rapa HOM05D004897 ORTHO05D005928 7.0e-78 295.8 377 49.3
FvH4_5g17221 Fragaria vesca HOM05D004897 ORTHO05D005928 9.2e-78 295.4 376 55.9
C08p18450 Brassica napus HOM05D004897 ORTHO05D005928 1.2e-77 295.0 380 47.9
HPP92_013368 Vanilla planifolia HOM05D004897 ORTHO05D005928 2.7e-77 293.9 386 49.0
Os04g0652500 Oryza sativa ssp. japonica HOM05D004897 ORTHO05D005928 2.6e-72 277.3 343 47.5
GSVIVG01008417001 Vitis vinifera HOM05D004897 ORTHO05D005928 8.9e-65 252.3 262 58.4
Zm00001eb068130 Zea mays HOM05D004897 ORTHO05D005928 8.9e-65 252.3 335 47.2
BcaNung05436 Brassica carinata HOM05D004897 ORTHO05D005928 6.0e-61 239.6 340 46.8
CARHR018760 Cardamine hirsuta HOM05D004897 ORTHO05D005928 5.8e-56 223.0 287 48.1
BolC8t49476H Brassica oleracea HOM05D004897 ORTHO05D005928 1.1e-54 218.8 334 42.8
GSVIVG01008418001 Vitis vinifera HOM05D004897 ORTHO05D005928 6.4e-47 193.0 281 55.2
Gorai.006G192100 Gossypium raimondii HOM05D004897 ORTHO05D005928 2.3e-44 184.5 207 52.7
Gohir.D09G170550 Gossypium hirsutum HOM05D004897 ORTHO05D005928 8.7e-44 182.6 207 52.7
ATR1102G018 Amborella trichopoda HOM05D004897 ORTHO05D005928 7.3e-43 179.5 271 45.0
BcaB03g12969 Brassica carinata HOM05D004897 ORTHO05D005928 3.1e-41 174.1 319 41.7
Mapoly0056s0112 Marchantia polymorpha HOM05D004897 ORTHO05D005928 2.2e-39 167.9 361 35.2
Pp3c2_5550 Physcomitrium patens HOM05D004897 ORTHO05D005928 4.9e-39 166.8 346 37.9
ATR1102G065 Amborella trichopoda HOM05D004897 ORTHO05D005928 1.5e-35 155.2 124 71.8
AagrBONN_evm.TU.Sc2ySwM_344.4779 Anthoceros agrestis HOM05D004897 ORTHO05D005928 1.9e-35 154.8 372 34.4
SEGI_33031 Sequoiadendron giganteum HOM05D004897 ORTHO05D005928 1.7e-31 141.7 262 37.4
unitig_0.g806 Utricularia gibba HOM05D004897 ORTHO05D005928 1.9e-30 138.3 229 41.0
Oeu041181.1 Olea europaea HOM05D004897 ORTHO05D005928 2.4e-30 137.9 332 36.1
CARHR018770 Cardamine hirsuta HOM05D004897 ORTHO05D005928 3.5e-29 134.0 105 73.3
Zm00001eb072950 Zea mays HOM05D004897 ORTHO05D005928 1.8e-28 131.7 144 53.5
Oeu041185.1 Olea europaea HOM05D004897 ORTHO05D005928 8.1e-26 122.9 226 43.8
Zm00001eb168530 Zea mays HOM05D004897 ORTHO05D005928 4.2e-22 110.5 127 47.2
Zm00001eb243110 Zea mays HOM05D004897 ORTHO05D005928 4.2e-22 110.5 127 47.2
Zm00001eb381910 Zea mays HOM05D004897 ORTHO05D005928 4.2e-22 110.5 127 47.2
Zm00001eb382530 Zea mays HOM05D004897 ORTHO05D005928 4.2e-22 110.5 127 47.2
AUR62041008 Chenopodium quinoa HOM05D004897 ORTHO05D005928 1.6e-21 108.6 124 69.4
Actinidia04720 Actinidia chinensis HOM05D004897 ORTHO05D005928 1.0e-20 105.9 135 69.6
CDE05G0958 Ceratophyllum demersum HOM05D004897 ORTHO05D005928 2.5e-19 101.3 84 69.0
Zm00001eb280830 Zea mays HOM05D004897 ORTHO05D005928 3.7e-18 97.4 118 43.2
Zm00001eb382330 Zea mays HOM05D004897 ORTHO05D005928 3.7e-18 97.4 89 55.1
SMO269G0021 Selaginella moellendorffii HOM05D004897 ORTHO05D005928 4.2e-14 84.0 241 33.2
TWI36G1671 Tripterygium wilfordii HOM05D004897 ORTHO05D005928 2.2e-10 71.6 98 56.1
PGSC0003DMG403005669 Solanum tuberosum HOM05D004897 ORTHO05D005928 4.8e-10 70.5 61 59.0
Prupe.5G050900 Prunus persica HOM05D004897 ORTHO05D005928 4.1e-09 67.4 49 73.5
arahy.Tifrunner.gnm1.ann1.U711QF Arachis hypogaea HOM05D004897 ORTHO05D005928 1.7e-07 62.0 146 37.7
SEGI_22595 Sequoiadendron giganteum HOM05D004897 ORTHO05D005928 2.2e-07 61.6 115 43.5
Actinidia04719 Actinidia chinensis HOM05D004897 ORTHO05D005928 8.5e-07 59.7 52 61.5
Prupe.7G033500 Prunus persica HOM05D004897 ORTHO05D005928 1.9e-06 58.5 105 43.8
CDE02G0772 Ceratophyllum demersum HOM05D004485 ORTHO05D005485 5.5e-06 57.0 177 26.6
MBI14_g27819_MAGBIO Magnolia biondii HOM05D004897 ORTHO05D022889 5.5e-06 57.0 48 66.7
SEGI_40884 Sequoiadendron giganteum HOM05D004485 ORTHO05D005485 5.5e-06 57.0 359 25.1


User provided reference genes

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