Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv15971 Davidia involucrata HOM05D004355 ORTHO05D005228 5.1e-148 527.7 263 100.0
Dinv18225 Davidia involucrata HOM05D004355 ORTHO05D005228 5.1e-148 527.7 263 100.0
Dinv35767 Davidia involucrata HOM05D004355 ORTHO05D003235 3.1e-52 209.5 159 70.4
Dinv23629 Davidia involucrata HOM05D004355 ORTHO05D005228 1.3e-42 177.6 138 68.8
Dinv34489 Davidia involucrata HOM05D004355 ORTHO05D005228 1.7e-42 177.2 138 68.1
Hma1.2p1_1099F.1_g256870 Hydrangea macrophylla HOM05D004355 ORTHO05D005228 3.1e-36 156.4 130 64.6
Dinv07786 Davidia involucrata HOM05D004355 ORTHO05D005228 2.6e-35 153.3 89 80.9
CSS0041806 Camellia sinensis var. sinensis HOM05D004355 ORTHO05D005228 1.0e-31 141.4 155 51.0
CSS0033330 Camellia sinensis var. sinensis HOM05D004355 ORTHO05D005228 1.7e-31 140.6 157 50.3
DCAR_009301 Daucus carota HOM05D004355 ORTHO05D005228 1.4e-28 131.0 123 56.1
Manes.08G008600 Manihot esculenta HOM05D004355 ORTHO05D005228 1.8e-28 130.6 117 56.4
TWI77G0715 Tripterygium wilfordii HOM05D004355 ORTHO05D005228 1.2e-27 127.9 121 54.5
CSS0012498 Camellia sinensis var. sinensis HOM05D004355 ORTHO05D005228 1.3e-26 124.4 129 53.5
Manes.09G063900 Manihot esculenta HOM05D004355 ORTHO05D005228 6.4e-26 122.1 127 53.5
PGSC0003DMG400035240 Solanum tuberosum HOM05D004355 ORTHO05D005228 8.4e-26 121.7 123 52.8
Potri.006G126600 Populus trichocarpa HOM05D004355 ORTHO05D005228 1.1e-25 121.3 129 53.5
Solyc09g007950.3 Solanum lycopersicum HOM05D004355 ORTHO05D005228 1.4e-25 120.9 123 52.8
Sopen09g002770 Solanum pennellii HOM05D004355 ORTHO05D005228 1.4e-25 120.9 123 52.8
CANSAT80G0576 Cannabis sativa HOM05D004355 ORTHO05D005228 2.4e-25 120.2 138 49.3
Sabra06G0099700 Salix brachista HOM05D004355 ORTHO05D005228 2.4e-25 120.2 124 54.8
Potri.016G091400 Populus trichocarpa HOM05D004355 ORTHO05D005228 9.3e-25 118.2 124 53.2
Lsat_1_v5_gn_1_53141 Lactuca sativa HOM05D004355 ORTHO05D005228 7.8e-24 115.2 130 49.2
Sc02g0001740 Simmondsia chinensis HOM05D004355 ORTHO05D005228 1.3e-23 114.4 121 54.5
HanXRQChr11g0350251 Helianthus annuus HOM05D004355 ORTHO05D005228 3.0e-23 113.2 114 51.8
Nitab4.5_0002963g0100 Nicotiana tabacum HOM05D004355 ORTHO05D005228 3.0e-23 113.2 132 48.5
Haze_20575 Corylus avellana HOM05D004355 ORTHO05D005228 3.9e-23 112.8 123 48.8
Lalb_Chr01g0018741 Lupinus albus HOM05D004355 ORTHO05D005228 3.9e-23 112.8 132 50.0
Atru.chr8.1850 Acer truncatum HOM05D004355 ORTHO05D005228 5.1e-23 112.5 118 49.2
Phvul.001G178100 Phaseolus vulgaris HOM05D004355 ORTHO05D005228 8.7e-23 111.7 128 50.0
CsaV3_6G039740 Cucumis sativus L. HOM05D004355 ORTHO05D005228 1.5e-22 110.9 129 48.8
Glyma.19G182500 Glycine max HOM05D004355 ORTHO05D005228 1.5e-22 110.9 121 50.4
Lalb_Chr25g0289061 Lupinus albus HOM05D004355 ORTHO05D005228 1.5e-22 110.9 132 48.5
Ca_08851_v3 Cicer arietinum L. HOM05D004355 ORTHO05D005228 1.9e-22 110.5 126 48.4
Cc06_g04030 Coffea canephora HOM05D004355 ORTHO05D005228 1.9e-22 110.5 133 46.6
Cfa017577 Carpinus fangiana HOM05D004355 ORTHO05D005228 2.5e-22 110.2 123 48.8
Nitab4.5_0000101g0300 Nicotiana tabacum HOM05D004355 ORTHO05D005228 2.5e-22 110.2 118 49.2
TWI74G0762 Tripterygium wilfordii HOM05D004355 ORTHO05D005228 3.3e-22 109.8 124 49.2
Nn2g11520 Nelumbo nucifera HOM05D004355 ORTHO05D005228 4.3e-22 109.4 122 52.5
TPR.G9373 Trifolium pratense HOM05D004355 ORTHO05D005228 5.6e-22 109.0 135 45.9
Glyma.03G182000 Glycine max HOM05D004355 ORTHO05D005228 7.3e-22 108.6 125 50.4
Sed0019590 Sechium edule HOM05D004355 ORTHO05D005228 1.3e-21 107.8 124 49.2
MELO3C009345.2 Cucumis melo HOM05D004355 ORTHO05D005228 1.6e-21 107.5 126 48.4
VMungo1383G3555 Vigna mungo HOM05D004355 ORTHO05D005228 1.6e-21 107.5 126 49.2
MELO3C014220.2 Cucumis melo HOM05D004355 ORTHO05D005228 2.1e-21 107.1 129 47.3
Nn2g13729 Nelumbo nucifera HOM05D004355 ORTHO05D005228 2.1e-21 107.1 122 53.3
Psat3g043400 Pisum sativum HOM05D004355 ORTHO05D005228 2.1e-21 107.1 135 43.0
COL.COLO4_26990 Corchorus olitorius HOM05D004355 ORTHO05D005228 3.6e-21 106.3 115 51.3
ClCG10G020240 Citrullus lanatus HOM05D004355 ORTHO05D005228 4.8e-21 105.9 126 49.2
CsaV3_3G035850 Cucumis sativus L. HOM05D004355 ORTHO05D005228 6.2e-21 105.5 126 47.6
TAR633G2000 Trochodendron aralioides HOM05D004355 ORTHO05D005228 6.2e-21 105.5 120 51.7
Duzib128G1889 Durio zibethinus HOM05D004355 ORTHO05D005228 1.4e-20 104.4 115 51.3
Thecc.05G062900 Theobroma cacao HOM05D004355 ORTHO05D005228 1.8e-20 104.0 116 50.9
QL07p044062 Quercus lobata HOM05D004355 ORTHO05D005228 2.4e-20 103.6 133 46.6
CiPaw.10G132700 Carya illinoinensis HOM05D004355 ORTHO05D005228 4.0e-20 102.8 124 45.2
Gorai.002G162400 Gossypium raimondii HOM05D004355 ORTHO05D005228 4.0e-20 102.8 122 48.4
Duzib106G0643 Durio zibethinus HOM05D004355 ORTHO05D005228 5.3e-20 102.4 115 50.4
Gohir.A09G148600 Gossypium hirsutum HOM05D004355 ORTHO05D005228 5.3e-20 102.4 115 50.4
Gohir.D09G144400 Gossypium hirsutum HOM05D004355 ORTHO05D005228 6.9e-20 102.1 115 50.4
Gorai.006G165700 Gossypium raimondii HOM05D004355 ORTHO05D005228 6.9e-20 102.1 115 50.4
Gohir.D01G128600 Gossypium hirsutum HOM05D004355 ORTHO05D005228 9.0e-20 101.7 122 48.4
Medtr7g101730 Medicago truncatula HOM05D004355 ORTHO05D005228 1.2e-19 101.3 139 43.9
Gohir.A01G139600 Gossypium hirsutum HOM05D004355 ORTHO05D005228 1.5e-19 100.9 128 48.4
vmacro08776 Vaccinium macrocarpon HOM05D004355 ORTHO05D005228 1.5e-19 100.9 111 54.1
Sed0012541 Sechium edule HOM05D004355 ORTHO05D005228 3.4e-19 99.8 122 53.3
MSTRG.26701 Avicennia marina HOM05D004355 ORTHO05D005228 9.9e-19 98.2 119 44.5
Duzib093G1016 Durio zibethinus HOM05D004355 ORTHO05D005228 1.3e-18 97.8 115 48.7
Lj1g0007988 Lotus japonicus HOM05D004355 ORTHO05D005228 1.3e-18 97.8 123 48.0
Rhsim04G0145100 Rhododendron simsii HOM05D004355 ORTHO05D005228 1.3e-18 97.8 129 48.8
ClCG04G009160 Citrullus lanatus HOM05D004355 ORTHO05D005228 3.8e-18 96.3 121 47.9
Gohir.A04G073200 Gossypium hirsutum HOM05D004355 ORTHO05D005228 1.9e-17 94.0 115 47.0
Gohir.D04G112100 Gossypium hirsutum HOM05D004355 ORTHO05D005228 2.4e-17 93.6 115 46.1
Gorai.009G416200 Gossypium raimondii HOM05D004355 ORTHO05D005228 2.4e-17 93.6 115 46.1
HanXRQChr13g0399881 Helianthus annuus HOM05D004355 ORTHO05D005228 2.4e-17 93.6 127 44.9
TAR369G0267 Trochodendron aralioides HOM05D004355 ORTHO05D005228 5.4e-17 92.4 119 46.2
FAN05G2251 Fragaria x ananassa HOM05D004355 ORTHO05D005228 9.3e-17 91.7 147 42.2
TAR636G0816 Trochodendron aralioides HOM05D004355 ORTHO05D005228 1.2e-16 91.3 121 46.3
MD04G1095900 Malus domestica HOM05D004355 ORTHO05D005228 1.6e-16 90.9 125 45.6
Ciclev10011674m.g Citrus clementina HOM05D004355 ORTHO05D005228 2.7e-16 90.1 117 45.3
MD12G1115900 Malus domestica HOM05D004355 ORTHO05D005228 3.5e-16 89.7 125 44.8
ECA233G2716 Erigeron canadensis HOM05D004355 ORTHO05D005228 1.0e-15 88.2 151 38.4
FvH4_6g16100 Fragaria vesca HOM05D004355 ORTHO05D005228 1.0e-15 88.2 126 46.0
SalBow5G3882 Salvia bowleyana HOM05D004355 ORTHO05D005228 3.9e-15 86.3 172 36.0
SalBow5G3919 Salvia bowleyana HOM05D004355 ORTHO05D005228 3.9e-15 86.3 172 36.0
AUR62039881 Chenopodium quinoa HOM05D004355 ORTHO05D005228 8.7e-15 85.1 102 47.1
Dinv37299 Davidia involucrata HOM05D004355 ORTHO05D005228 8.7e-15 85.1 49 81.6
FAN02G3539 Fragaria x ananassa HOM05D004355 ORTHO05D005228 8.7e-15 85.1 120 45.0
Prupe.6G235000 Prunus persica HOM05D004355 ORTHO05D005228 1.1e-14 84.7 125 45.6
Migut.L01688 Erythranthe guttata HOM05D004355 ORTHO05D005228 1.9e-14 84.0 124 41.1
Aa31LG5G22300 Aethionema arabicum HOM05D004355 ORTHO05D005228 2.5e-14 83.6 124 39.5
Cpa.g.sc92.114 Carica papaya HOM05D004355 ORTHO05D005228 5.6e-14 82.4 122 40.2
vmacro20020 Vaccinium macrocarpon HOM05D004355 ORTHO05D005228 1.3e-13 81.3 149 37.6
CARHR131530 Cardamine hirsuta HOM05D004355 ORTHO05D005228 1.6e-13 80.9 113 41.6
Peaxi162Scf00123g01123 Petunia axillaris HOM05D004355 ORTHO05D005228 2.1e-13 80.5 99 46.5
PGR004G0459 Punica granatum HOM05D004355 ORTHO05D005228 2.8e-13 80.1 147 37.4
BraA05t19847Z Brassica rapa HOM05D004355 ORTHO05D005228 8.1e-13 78.6 129 40.3
AL4G33360 Arabidopsis lyrata HOM05D004355 ORTHO05D005228 1.4e-12 77.8 120 39.2
AT2G37035 Arabidopsis thaliana HOM05D004355 ORTHO05D005228 3.1e-12 76.6 120 39.2
Sp4g19340 Schrenkiella parvula HOM05D004355 ORTHO05D005228 4.0e-12 76.3 113 41.6
A05p08800 Brassica napus HOM05D004355 ORTHO05D005228 6.9e-12 75.5 120 40.8
ECA248G2910 Erigeron canadensis HOM05D004355 ORTHO05D005228 6.9e-12 75.5 134 38.8
BolC4t22685H Brassica oleracea HOM05D004355 ORTHO05D005228 9.0e-12 75.1 125 39.2
THA.LOC104806491 Tarenaya hassleriana HOM05D004355 ORTHO05D005228 9.0e-12 75.1 106 44.3
BcaC02g11829 Brassica carinata HOM05D004355 ORTHO05D005228 1.2e-11 74.7 125 39.2
C04p10920 Brassica napus HOM05D004355 ORTHO05D005228 1.2e-11 74.7 125 39.2
FAN03G0487 Fragaria x ananassa HOM05D004355 ORTHO05D005228 2.0e-11 73.9 127 41.7
unitig_899.g15220 Utricularia gibba HOM05D002910 ORTHO05D003235 2.6e-11 73.6 164 32.3
Carub.0004s1891 Capsella rubella HOM05D004355 ORTHO05D005228 4.5e-11 72.8 120 38.3
PSO801G0805 Papaver somniferum HOM05D004355 ORTHO05D005228 4.5e-11 72.8 141 37.6
unitig_746.g26764 Utricularia gibba HOM05D004355 ORTHO05D005228 4.5e-11 72.8 119 39.5
Lsat_1_v5_gn_6_31260 Lactuca sativa HOM05D004355 ORTHO05D005228 9.9e-11 71.6 124 37.9
SGA_v2.0_scaffold75G24855 Striga asiatica HOM05D004355 ORTHO05D005228 1.3e-10 71.2 152 33.6
PSO339G4715 Papaver somniferum HOM05D004355 ORTHO05D005228 1.7e-10 70.9 142 38.0
Ah.08g211740 Amaranthus hybridus HOM05D004355 ORTHO05D005228 4.9e-10 69.3 123 38.2
Aqoxy1G01202 Aquilegia oxysepala HOM05D004355 ORTHO05D005228 4.9e-10 69.3 121 42.1
FAN26G1787 Fragaria x ananassa HOM05D004355 ORTHO05D005228 1.1e-09 68.2 128 39.1
Sabra16G0096600 Salix brachista HOM05D004355 ORTHO05D005228 1.1e-09 68.2 66 50.0
Rhsim05G0179400 Rhododendron simsii HOM05D004355 ORTHO05D005228 1.4e-09 67.8 130 39.2
Lsat_1_v5_gn_6_70860 Lactuca sativa HOM05D004355 ORTHO05D005228 1.9e-09 67.4 131 35.1
THA.LOC104823460 Tarenaya hassleriana HOM05D004355 ORTHO05D005228 2.4e-09 67.0 119 37.0
Lsat_1_v5_gn_6_31200 Lactuca sativa HOM05D004355 ORTHO05D005228 7.1e-09 65.5 131 32.1
Psat2g063600 Pisum sativum HOM05D004355 ORTHO05D005228 9.3e-09 65.1 68 45.6
Migut.J00528 Erythranthe guttata HOM05D004355 ORTHO05D005228 2.1e-08 63.9 115 36.5
AL693U10010 Arabidopsis lyrata HOM05D004355 ORTHO05D005228 2.7e-08 63.5 90 42.2
Dinv17978 Davidia involucrata HOM05D039104 ORTHO05D016271 3.5e-08 63.2 38 84.2
FAN05G3868 Fragaria x ananassa HOM05D004355 ORTHO05D005228 3.5e-08 63.2 129 36.4
FAN09G2012 Fragaria x ananassa HOM05D004355 ORTHO05D005228 4.6e-08 62.8 123 41.5
Lsat_1_v5_gn_6_31300 Lactuca sativa HOM05D004355 ORTHO05D005228 7.9e-08 62.0 115 36.5
EL10Ac7g16576 Beta vulgaris HOM05D004355 ORTHO05D005228 3.0e-07 60.1 112 38.4


User provided reference genes

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