Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv18189 Davidia involucrata HOM05D005419 ORTHO05D007365 8.2e-151 537.0 258 100.0
Dinv15871 Davidia involucrata HOM05D005419 ORTHO05D007365 5.7e-136 487.6 292 82.2
GSVIVG01035939001 Vitis vinifera HOM05D005419 ORTHO05D007365 1.6e-133 479.6 292 81.2
CSS0019044 Camellia sinensis var. sinensis HOM05D005419 ORTHO05D007365 1.7e-132 476.1 292 80.1
Hma1.2p1_0974F.1_g243070 Hydrangea macrophylla HOM05D005419 ORTHO05D007365 2.5e-131 472.2 292 79.5
Cfa013117 Carpinus fangiana HOM05D005419 ORTHO05D007365 4.7e-130 468.0 292 78.8
QL02p020871 Quercus lobata HOM05D005419 ORTHO05D007365 6.1e-130 467.6 291 79.7
TAR383G1021 Trochodendron aralioides HOM05D005419 ORTHO05D007365 1.0e-129 466.8 290 78.6
Duzib150G0083 Durio zibethinus HOM05D005419 ORTHO05D007365 3.0e-129 465.3 292 79.1
Cc08_g00340 Coffea canephora HOM05D005419 ORTHO05D007365 6.8e-129 464.2 292 78.4
MD15G1129200 Malus domestica HOM05D005419 ORTHO05D007365 8.8e-129 463.8 292 78.4
PGR119G2552 Punica granatum HOM05D005419 ORTHO05D007365 2.6e-128 462.2 292 77.1
Ciclev10009082m.g Citrus clementina HOM05D005419 ORTHO05D007365 4.4e-128 461.5 292 77.4
Atru.chr7.2482 Acer truncatum HOM05D005419 ORTHO05D007365 7.5e-128 460.7 290 76.9
RcHm_v2.0_Chr6g0297381 Rosa chinensis HOM05D005419 ORTHO05D007365 9.8e-128 460.3 292 76.7
Manes.16G125000 Manihot esculenta HOM05D005419 ORTHO05D007365 2.8e-127 458.8 292 76.4
Nitab4.5_0014723g0010 Nicotiana tabacum HOM05D005419 ORTHO05D007365 2.8e-127 458.8 292 77.4
Gohir.D05G058700 Gossypium hirsutum HOM05D005419 ORTHO05D007365 3.7e-127 458.4 292 77.4
Gorai.009G059800 Gossypium raimondii HOM05D005419 ORTHO05D007365 3.7e-127 458.4 292 77.4
Gorai.010G116600 Gossypium raimondii HOM05D005419 ORTHO05D007365 6.3e-127 457.6 292 77.7
MD08G1152600 Malus domestica HOM05D005419 ORTHO05D007365 6.3e-127 457.6 292 77.4
Nn2g12192 Nelumbo nucifera HOM05D005419 ORTHO05D007365 8.3e-127 457.2 292 76.7
TWI34G1484 Tripterygium wilfordii HOM05D005419 ORTHO05D007365 8.3e-127 457.2 292 76.4
Gohir.A06G099500 Gossypium hirsutum HOM05D005419 ORTHO05D007365 1.4e-126 456.4 292 77.4
Gohir.D06G101700 Gossypium hirsutum HOM05D005419 ORTHO05D007365 4.1e-126 454.9 292 77.4
SalBow4G1212 Salvia bowleyana HOM05D005419 ORTHO05D007365 4.1e-126 454.9 292 76.7
Actinidia14096 Actinidia chinensis HOM05D005419 ORTHO05D007365 5.4e-126 454.5 280 78.9
CiPaw.07G226000 Carya illinoinensis HOM05D005419 ORTHO05D007365 7.0e-126 454.1 292 77.1
FvH4_2g28610 Fragaria vesca HOM05D005419 ORTHO05D007365 9.1e-126 453.8 292 76.7
FAN24G2053 Fragaria x ananassa HOM05D005419 ORTHO05D007365 9.1e-126 453.8 292 76.7
Peaxi162Scf00935g00015 Petunia axillaris HOM05D005419 ORTHO05D007365 9.1e-126 453.8 292 76.4
Thecc.09G020800 Theobroma cacao HOM05D005419 ORTHO05D007365 9.1e-126 453.8 294 77.2
Sopen08g010000 Solanum pennellii HOM05D005419 ORTHO05D007365 2.0e-125 452.6 292 77.1
Aqoxy7G03594 Aquilegia oxysepala HOM05D005419 ORTHO05D007365 2.7e-125 452.2 292 75.7
MSTRG.26021 Avicennia marina HOM05D005419 ORTHO05D007365 3.5e-125 451.8 289 76.8
Migut.A00016 Erythranthe guttata HOM05D005419 ORTHO05D007365 4.5e-125 451.4 292 76.4
Phvul.001G049700 Phaseolus vulgaris HOM05D005419 ORTHO05D007365 4.5e-125 451.4 288 76.0
FAN20G2331 Fragaria x ananassa HOM05D005419 ORTHO05D007365 5.9e-125 451.1 292 76.0
Lj8A726G39 Lonicera japonica HOM05D005419 ORTHO05D007365 7.7e-125 450.7 290 76.9
EL10Ac2g04167 Beta vulgaris HOM05D005419 ORTHO05D007365 1.0e-124 450.3 292 75.7
VMungo0647G0032 Vigna mungo HOM05D005419 ORTHO05D007365 1.0e-124 450.3 288 76.0
arahy.Tifrunner.gnm1.ann1.2DG9CD Arachis hypogaea HOM05D005419 ORTHO05D007365 1.3e-124 449.9 286 76.9
arahy.Tifrunner.gnm1.ann1.X3TF0E Arachis hypogaea HOM05D005419 ORTHO05D007365 1.3e-124 449.9 286 76.9
CsaV3_2G032220 Cucumis sativus L. HOM05D005419 ORTHO05D007365 1.3e-124 449.9 292 75.7
Eucgr.K02838 Eucalyptus grandis HOM05D005419 ORTHO05D007365 1.3e-124 449.9 292 74.3
Solyc08g029110.3 Solanum lycopersicum HOM05D005419 ORTHO05D007365 1.3e-124 449.9 292 76.7
Potri.018G023700 Populus trichocarpa HOM05D005419 ORTHO05D007365 1.7e-124 449.5 292 76.0
Haze_21481 Corylus avellana HOM05D005419 ORTHO05D007365 2.2e-124 449.1 321 70.7
Glyma.14G113800 Glycine max HOM05D005419 ORTHO05D007365 2.9e-124 448.7 288 75.7
Cpa.g.sc187.13 Carica papaya HOM05D005419 ORTHO05D007365 5.0e-124 448.0 290 75.9
CANSAT25G3306 Cannabis sativa HOM05D005419 ORTHO05D007365 6.5e-124 447.6 289 75.1
DCAR_003104 Daucus carota HOM05D005419 ORTHO05D007365 6.5e-124 447.6 292 75.0
Sed0010362 Sechium edule HOM05D005419 ORTHO05D007365 8.5e-124 447.2 292 74.7
MELO3C011274.2 Cucumis melo HOM05D005419 ORTHO05D007365 1.9e-123 446.0 292 75.3
ECA248G3461 Erigeron canadensis HOM05D005419 ORTHO05D007365 7.2e-123 444.1 290 73.4
Lalb_Chr23g0268401 Lupinus albus HOM05D005419 ORTHO05D007365 1.6e-122 443.0 290 75.2
Potri.006G258200 Populus trichocarpa HOM05D005419 ORTHO05D007365 1.6e-122 443.0 292 75.3
BcaB06g28051 Brassica carinata HOM05D005419 ORTHO05D007365 2.1e-122 442.6 292 72.9
THA.LOC104805589 Tarenaya hassleriana HOM05D005419 ORTHO05D007365 2.1e-122 442.6 292 73.6
SGA_v2.0_scaffold20G09092 Striga asiatica HOM05D005419 ORTHO05D007365 3.6e-122 441.8 292 76.0
AUR62031558 Chenopodium quinoa HOM05D005419 ORTHO05D007365 4.7e-122 441.4 290 75.2
Medtr1g012830 Medicago truncatula HOM05D005419 ORTHO05D007365 4.7e-122 441.4 288 74.0
Lj5g0012746 Lotus japonicus HOM05D005419 ORTHO05D007365 1.0e-121 440.3 288 73.6
unitig_32.g10881 Utricularia gibba HOM05D005419 ORTHO05D007365 2.3e-121 439.1 290 73.4
Sp4g04430 Schrenkiella parvula HOM05D005419 ORTHO05D007365 4.0e-121 438.3 292 72.3
Nitab4.5_0007718g0040 Nicotiana tabacum HOM05D005419 ORTHO05D007365 6.8e-121 437.6 292 74.7
Aa31sc229G10 Aethionema arabicum HOM05D005419 ORTHO05D007365 8.8e-121 437.2 292 71.6
A04p19650 Brassica napus HOM05D005419 ORTHO05D007365 8.8e-121 437.2 292 71.9
BraA04t17556Z Brassica rapa HOM05D005419 ORTHO05D007365 8.8e-121 437.2 292 71.9
AUR62012434 Chenopodium quinoa HOM05D005419 ORTHO05D007365 1.2e-120 436.8 289 74.7
BolC4t27063H Brassica oleracea HOM05D005419 ORTHO05D007365 2.6e-120 435.6 292 71.6
BcaC02g08359 Brassica carinata HOM05D005419 ORTHO05D007365 3.4e-120 435.3 292 71.6
Thhalv10000272m.g Eutrema salsugineum HOM05D005419 ORTHO05D007365 4.4e-120 434.9 292 71.6
C04p55260 Brassica napus HOM05D005419 ORTHO05D007365 5.7e-120 434.5 292 71.2
FAN27G2423 Fragaria x ananassa HOM05D005419 ORTHO05D007365 5.7e-120 434.5 292 74.7
Ca_13036_v3 Cicer arietinum L. HOM05D005419 ORTHO05D007365 7.5e-120 434.1 288 72.2
Sc09g0010330 Simmondsia chinensis HOM05D005419 ORTHO05D007365 9.8e-120 433.7 291 73.9
Psat6g028000 Pisum sativum HOM05D005419 ORTHO05D007365 1.3e-119 433.3 288 73.3
HanXRQChr13g0387991 Helianthus annuus HOM05D005419 ORTHO05D007365 1.7e-119 433.0 290 71.7
TPR.G14021 Trifolium pratense HOM05D005419 ORTHO05D007365 1.7e-119 433.0 288 72.2
vmacro05161 Vaccinium macrocarpon HOM05D005419 ORTHO05D007365 2.8e-119 432.2 272 78.7
Carub.0004s0490 Capsella rubella HOM05D005419 ORTHO05D007365 4.9e-119 431.4 290 71.7
BcaB08g35172 Brassica carinata HOM05D005419 ORTHO05D007365 1.4e-118 429.9 292 70.9
AL4G16610 Arabidopsis lyrata HOM05D005419 ORTHO05D007365 2.4e-118 429.1 292 70.9
CDE03G0272 Ceratophyllum demersum HOM05D005419 ORTHO05D007365 5.4e-118 427.9 291 70.8
THA.LOC104815027 Tarenaya hassleriana HOM05D005419 ORTHO05D007365 7.0e-118 427.6 286 73.4
AT2G25280 Arabidopsis thaliana HOM05D005419 ORTHO05D007365 9.1e-118 427.2 292 70.9
PSO210G4598 Papaver somniferum HOM05D005419 ORTHO05D007365 9.1e-118 427.2 293 71.3
MBI15_g25765_MAGBIO Magnolia biondii HOM05D005419 ORTHO05D007365 1.2e-117 426.8 290 71.4
A09p55730 Brassica napus HOM05D005419 ORTHO05D007365 1.6e-117 426.4 292 69.9
BraA09t40974Z Brassica rapa HOM05D005419 ORTHO05D007365 1.6e-117 426.4 292 69.9
Os08g0299000 Oryza sativa ssp. japonica HOM05D005419 ORTHO05D007365 1.6e-117 426.4 290 70.3
C08p38730 Brassica napus HOM05D005419 ORTHO05D007365 2.0e-117 426.0 292 69.9
BolC8t51443H Brassica oleracea HOM05D005419 ORTHO05D007365 2.0e-117 426.0 292 69.9
BcaC07g40875 Brassica carinata HOM05D005419 ORTHO05D007365 1.0e-116 423.7 286 70.6
CANSAT54G2335 Cannabis sativa HOM05D005419 ORTHO05D007365 2.3e-116 422.5 289 69.6
HPP92_000481 Vanilla planifolia HOM05D005419 ORTHO05D007365 2.3e-116 422.5 291 68.7
ATR0767G069 Amborella trichopoda HOM05D005419 ORTHO05D007365 5.5e-115 417.9 272 76.5
FAN15G2739 Fragaria x ananassa HOM05D005419 ORTHO05D007365 9.5e-115 417.2 278 74.1
Rhsim12G0212900 Rhododendron simsii HOM05D005419 ORTHO05D007365 1.2e-114 416.8 292 72.3
Prupe.1G484800 Prunus persica HOM05D005419 ORTHO05D007365 2.8e-114 415.6 274 75.2
Duzib168G1909 Durio zibethinus HOM05D005419 ORTHO05D007365 1.8e-113 412.9 292 71.9
Zm00001eb362830 Zea mays HOM05D005419 ORTHO05D007365 2.0e-112 409.5 289 70.6
Lsat_1_v5_gn_5_157921 Lactuca sativa HOM05D005419 ORTHO05D007365 3.4e-112 408.7 288 70.8
Sabra18G0026400 Salix brachista HOM05D005419 ORTHO05D007365 9.8e-112 407.1 273 74.4
CARHR116260 Cardamine hirsuta HOM05D005419 ORTHO05D007365 1.3e-111 406.8 294 66.3
COL.COLO4_18897 Corchorus olitorius HOM05D005419 ORTHO05D007365 1.6e-109 399.8 251 77.3
Sed0006243 Sechium edule HOM05D005419 ORTHO05D007365 1.6e-109 399.8 289 66.8
ClCG08G013470 Citrullus lanatus HOM05D005419 ORTHO05D007365 2.5e-107 392.5 313 65.5
SMO358G0334 Selaginella moellendorffii HOM05D005419 ORTHO05D007365 9.8e-104 380.6 288 63.9
MBI15_g36826_MAGBIO Magnolia biondii HOM05D005419 ORTHO05D007365 5.4e-102 374.8 265 70.2
Hund04483 Selenicereus undatus HOM05D005419 ORTHO05D007365 7.0e-102 374.4 309 61.2
Mapoly0065s0048 Marchantia polymorpha HOM05D005419 ORTHO05D007365 1.6e-101 373.2 287 62.7
Pp3c14_17280 Physcomitrium patens HOM05D005419 ORTHO05D007365 2.1e-98 362.8 281 61.9
SEGI_34683 Sequoiadendron giganteum HOM05D005419 ORTHO05D007365 1.3e-95 353.6 273 62.6
Pp3c2_14390 Physcomitrium patens HOM05D005419 ORTHO05D007365 1.7e-92 343.2 267 62.2
CBR_g59364 Chara braunii HOM05D005419 ORTHO05D007365 6.2e-90 334.7 281 55.9
Rhsim07G0160700 Rhododendron simsii HOM05D005419 ORTHO05D007365 6.8e-89 331.3 279 63.8
SEGI_02513 Sequoiadendron giganteum HOM05D005419 ORTHO05D007365 1.2e-82 310.5 223 68.2
Oeu012280.1 Olea europaea HOM05D005419 ORTHO05D007365 3.4e-72 275.8 158 82.9
CAN.G75.9 Capsicum annuum HOM05D005419 ORTHO05D007365 2.9e-71 272.7 158 83.5
Sabra06G0201900 Salix brachista HOM05D005419 ORTHO05D007365 1.6e-69 266.9 158 80.4
THA.LOC104815144 Tarenaya hassleriana HOM05D005419 ORTHO05D007365 3.5e-69 265.8 152 83.6
Cre02.g096200 Chlamydomonas reinhardtii HOM05D005419 ORTHO05D007365 1.5e-67 260.4 285 47.0
PRCOL_00000176 Prasinoderma coloniale HOM05D005419 ORTHO05D007365 1.4e-65 253.8 293 47.4
MCO07G667 Micromonas commoda HOM05D005419 ORTHO05D007365 3.4e-64 249.2 297 48.1
FAN09G2129 Fragaria x ananassa HOM05D005419 ORTHO05D019206 1.2e-61 240.7 190 66.3
FAN28G2535 Fragaria x ananassa HOM05D005419 ORTHO05D019206 6.7e-60 235.0 187 66.3
Haze_26290 Corylus avellana HOM05D005419 ORTHO05D007365 4.3e-59 232.3 291 42.3
AagrBONN_evm.TU.Sc2ySwM_368.1912 Anthoceros agrestis HOM05D005419 ORTHO05D007365 1.8e-57 226.9 188 61.2
Oeu012278.1 Olea europaea HOM05D005419 ORTHO05D007365 4.1e-49 199.1 126 77.0
FAN01G2683 Fragaria x ananassa HOM05D005419 ORTHO05D019206 2.9e-47 193.0 101 91.1
Cfa026845 Carpinus fangiana HOM05D005419 ORTHO05D007365 3.8e-47 192.6 308 40.3
FAN02G2313 Fragaria x ananassa HOM05D005419 ORTHO05D019206 5.0e-47 192.2 102 89.2
FAN21G3387 Fragaria x ananassa HOM05D005419 ORTHO05D019206 3.0e-44 183.0 97 89.7
Lalb_Chr11g0063641 Lupinus albus HOM05D005419 ORTHO05D007365 7.4e-35 151.8 164 51.8
FAN05G2233 Fragaria x ananassa HOM05D004769 ORTHO05D005605 1.2e-29 134.4 130 55.4
Os05g0310750 Oryza sativa ssp. japonica HOM05D005419 ORTHO05D019206 1.2e-29 134.4 76 82.9
FAN16G2296 Fragaria x ananassa HOM05D005419 ORTHO05D019206 1.4e-25 120.9 97 67.0
MBI12_g19406_MAGBIO Magnolia biondii HOM05D005419 ORTHO05D242193 1.8e-09 67.4 51 60.8
Prupe.1G567700 Prunus persica HOM05D005419 ORTHO05D019206 3.1e-09 66.6 40 82.5


User provided reference genes

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