Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv18178 Davidia involucrata HOM05D000287 ORTHO05D185971 4.7e-100 367.9 186 100.0
Dinv11985 Davidia involucrata HOM05D000287 ORTHO05D000319 1.8e-35 153.3 166 55.4
Dinv11984 Davidia involucrata HOM05D000287 ORTHO05D000319 3.1e-35 152.5 166 54.8
Rhsim13G0126200 Rhododendron simsii HOM05D000287 ORTHO05D000319 1.0e-30 137.5 164 48.2
Hma1.2p1_0648F.1_g195090 Hydrangea macrophylla HOM05D000287 ORTHO05D000319 2.0e-29 133.3 161 50.9
vmacro03454 Vaccinium macrocarpon HOM05D000287 ORTHO05D000319 3.4e-29 132.5 164 46.3
Rhsim13G0126100 Rhododendron simsii HOM05D000287 ORTHO05D000319 4.4e-29 132.1 163 47.2
Manes.14G127200 Manihot esculenta HOM05D000287 ORTHO05D000319 8.3e-28 127.9 161 45.3
FvH4_3g11590 Fragaria vesca HOM05D000287 ORTHO05D000319 2.4e-27 126.3 134 52.2
CiPaw.09G148700 Carya illinoinensis HOM05D000287 ORTHO05D000319 4.1e-27 125.6 161 46.0
MD05G1262500 Malus domestica HOM05D000287 ORTHO05D000319 5.4e-27 125.2 154 46.1
Cfa012443 Carpinus fangiana HOM05D000287 ORTHO05D000319 7.0e-27 124.8 162 46.3
MD05G1262600 Malus domestica HOM05D000287 ORTHO05D000319 1.6e-26 123.6 155 46.5
Potri.011G155600 Populus trichocarpa HOM05D000287 ORTHO05D000319 1.6e-26 123.6 164 45.1
MD05G1262700 Malus domestica HOM05D000287 ORTHO05D000319 2.7e-26 122.9 155 46.5
MD10G1240500 Malus domestica HOM05D000287 ORTHO05D000319 4.5e-26 122.1 155 45.8
Rhsim02G0046400 Rhododendron simsii HOM05D000287 ORTHO05D000319 7.7e-26 121.3 163 44.8
Haze_08224 Corylus avellana HOM05D000287 ORTHO05D000319 2.3e-25 119.8 162 45.7
Rhsim02G0044500 Rhododendron simsii HOM05D000287 ORTHO05D000319 2.3e-25 119.8 163 44.2
Duzib192G0185 Durio zibethinus HOM05D000287 ORTHO05D000319 2.9e-25 119.4 159 44.0
Potri.001G440200 Populus trichocarpa HOM05D000287 ORTHO05D000319 3.8e-25 119.0 163 46.0
QL05p065085 Quercus lobata HOM05D000287 ORTHO05D000319 3.8e-25 119.0 156 46.2
Rhsim02G0044700 Rhododendron simsii HOM05D000287 ORTHO05D000319 5.0e-25 118.6 164 45.1
TAR193G0001 Trochodendron aralioides HOM05D000287 ORTHO05D000319 5.0e-25 118.6 161 44.1
TAR624G0058 Trochodendron aralioides HOM05D000287 ORTHO05D000319 5.0e-25 118.6 161 44.1
TAR624G0443 Trochodendron aralioides HOM05D000287 ORTHO05D000319 5.0e-25 118.6 161 44.1
MD10G1240600 Malus domestica HOM05D000287 ORTHO05D000319 6.6e-25 118.2 154 44.8
FvH4_3g11580 Fragaria vesca HOM05D000287 ORTHO05D000319 1.9e-24 116.7 155 43.9
FAN16G2936 Fragaria x ananassa HOM05D000287 ORTHO05D000319 1.9e-24 116.7 155 43.9
TAR624G1428 Trochodendron aralioides HOM05D000287 ORTHO05D000319 2.5e-24 116.3 161 43.5
FAN16G2695 Fragaria x ananassa HOM05D000287 ORTHO05D000319 3.3e-24 115.9 163 43.6
FAN25G2406 Fragaria x ananassa HOM05D000287 ORTHO05D000319 3.3e-24 115.9 163 43.6
Duzib235G0822 Durio zibethinus HOM05D000287 ORTHO05D000319 4.2e-24 115.5 169 44.4
Lj1A1156T43 Lonicera japonica HOM05D000287 ORTHO05D000319 4.2e-24 115.5 158 43.7
Nn7g36569 Nelumbo nucifera HOM05D000287 ORTHO05D000319 4.2e-24 115.5 166 41.6
RcHm_v2.0_Chr5g0018501 Rosa chinensis HOM05D000287 ORTHO05D000319 4.2e-24 115.5 163 43.6
RcHm_v2.0_Chr5g0018521 Rosa chinensis HOM05D000287 ORTHO05D000319 4.2e-24 115.5 163 43.6
RcHm_v2.0_Chr5g0018551 Rosa chinensis HOM05D000287 ORTHO05D000319 4.2e-24 115.5 163 43.6
TAR626G0506 Trochodendron aralioides HOM05D000287 ORTHO05D000319 4.2e-24 115.5 165 41.2
Oeu052704.1 Olea europaea HOM05D000287 ORTHO05D000319 5.5e-24 115.2 157 42.7
Prupe.4G103300 Prunus persica HOM05D000287 ORTHO05D000319 5.5e-24 115.2 155 44.5
FAN21G0427 Fragaria x ananassa HOM05D000287 ORTHO05D000319 7.2e-24 114.8 154 43.5
Sabra16G0297400 Salix brachista HOM05D000287 ORTHO05D000319 7.2e-24 114.8 164 42.1
Sabra16G0297600 Salix brachista HOM05D000287 ORTHO05D000319 7.2e-24 114.8 164 42.7
PGR083G1572 Punica granatum HOM05D000287 ORTHO05D000319 9.5e-24 114.4 137 47.4
Manes.14G127100 Manihot esculenta HOM05D000287 ORTHO05D000319 1.2e-23 114.0 151 44.4
Prupe.4G103200 Prunus persica HOM05D000287 ORTHO05D000319 1.2e-23 114.0 155 44.5
QL05p065028 Quercus lobata HOM05D000287 ORTHO05D000319 1.6e-23 113.6 156 43.6
Actinidia29252 Actinidia chinensis HOM05D000287 ORTHO05D000319 2.1e-23 113.2 169 43.8
Cc04_g08820 Coffea canephora HOM05D000287 ORTHO05D000319 2.1e-23 113.2 153 43.1
Duzib160G0812 Durio zibethinus HOM05D000287 ORTHO05D000319 2.1e-23 113.2 170 41.8
Nn7g37830 Nelumbo nucifera HOM05D000287 ORTHO05D000319 2.1e-23 113.2 166 42.2
Oeu008974.1 Olea europaea HOM05D000287 ORTHO05D000319 2.1e-23 113.2 166 44.0
Oeu008975.1 Olea europaea HOM05D000287 ORTHO05D000319 2.1e-23 113.2 166 44.0
Oeu008976.1 Olea europaea HOM05D000287 ORTHO05D000319 2.1e-23 113.2 166 44.0
MSTRG.7568 Avicennia marina HOM05D000287 ORTHO05D000319 2.8e-23 112.8 159 42.8
Gorai.011G006100 Gossypium raimondii HOM05D000287 ORTHO05D000319 2.8e-23 112.8 168 41.1
TAR626G1003 Trochodendron aralioides HOM05D000287 ORTHO05D000319 3.6e-23 112.5 165 40.0
TAR626G1245 Trochodendron aralioides HOM05D000287 ORTHO05D000319 3.6e-23 112.5 165 40.0
FAN25G1931 Fragaria x ananassa HOM05D000287 ORTHO05D000319 6.1e-23 111.7 154 42.9
Thecc.06G007500 Theobroma cacao HOM05D000287 ORTHO05D000319 6.1e-23 111.7 137 47.4
Gohir.D10G005500 Gossypium hirsutum HOM05D000287 ORTHO05D000319 1.4e-22 110.5 168 40.5
Prupe.4G103000 Prunus persica HOM05D000287 ORTHO05D000319 1.4e-22 110.5 155 43.9
Migut.H01304 Erythranthe guttata HOM05D000287 ORTHO05D000319 2.3e-22 109.8 160 42.5
Actinidia33649 Actinidia chinensis HOM05D000287 ORTHO05D000319 3.0e-22 109.4 170 42.9
SalBow7G0847 Salvia bowleyana HOM05D000287 ORTHO05D000319 4.0e-22 109.0 157 40.1
MSTRG.16318 Avicennia marina HOM05D000287 ORTHO05D000319 5.2e-22 108.6 164 41.5
CSS0016227 Camellia sinensis var. sinensis HOM05D000287 ORTHO05D000319 1.2e-21 107.5 164 39.0
vmacro03455 Vaccinium macrocarpon HOM05D000287 ORTHO05D000319 1.5e-21 107.1 130 46.9
Sabra11G0144200 Salix brachista HOM05D000287 ORTHO05D000319 3.4e-21 105.9 138 44.2
Peaxi162Scf00195g00519 Petunia axillaris HOM05D000287 ORTHO05D000319 9.8e-21 104.4 165 36.4
COL.COLO4_22905 Corchorus olitorius HOM05D000287 ORTHO05D000319 6.3e-20 101.7 163 41.1
Eucgr.D01027 Eucalyptus grandis HOM05D000287 ORTHO05D000319 8.3e-20 101.3 164 37.8
Gohir.A10G005500 Gossypium hirsutum HOM05D000287 ORTHO05D000319 1.4e-19 100.5 172 37.8
CANSAT35G1705 Cannabis sativa HOM05D000287 ORTHO05D000319 1.8e-19 100.1 158 39.9
CANSAT35G0555 Cannabis sativa HOM05D000287 ORTHO05D000319 2.4e-19 99.8 165 38.8
Dinv09389 Davidia involucrata HOM05D000287 ORTHO05D000319 2.4e-19 99.8 153 39.9
Dinv22096 Davidia involucrata HOM05D000287 ORTHO05D000319 2.4e-19 99.8 153 39.9
Nitab4.5_0001219g0010 Nicotiana tabacum HOM05D000287 ORTHO05D000319 3.1e-19 99.4 165 36.4
COL.COLO4_26894 Corchorus olitorius HOM05D000287 ORTHO05D000319 7.0e-19 98.2 163 39.3
Solyc02g069600.3 Solanum lycopersicum HOM05D000287 ORTHO05D000319 2.7e-18 96.3 163 36.2
RcHm_v2.0_Chr5g0026691 Rosa chinensis HOM05D000287 ORTHO05D000319 3.5e-18 95.9 162 36.4
Nitab4.5_0005240g0010 Nicotiana tabacum HOM05D000287 ORTHO05D000319 4.5e-18 95.5 164 39.6
CAN.G675.31 Capsicum annuum HOM05D000287 ORTHO05D000319 5.9e-18 95.1 166 35.5
Eucgr.F01453 Eucalyptus grandis HOM05D000287 ORTHO05D000319 5.0e-17 92.0 160 36.2
Prupe.4G103100 Prunus persica HOM05D000287 ORTHO05D000319 1.1e-16 90.9 131 42.0
Lj8C219T7 Lonicera japonica HOM05D000287 ORTHO05D000319 1.6e-15 87.0 162 36.4
TAR626G0557 Trochodendron aralioides HOM05D000287 ORTHO05D000319 1.5e-13 80.5 128 39.1
RcHm_v2.0_Chr4g0433371 Rosa chinensis HOM05D000287 ORTHO05D000319 3.4e-13 79.3 160 35.0
TWI09G0279 Tripterygium wilfordii HOM05D000287 ORTHO05D000319 5.8e-13 78.6 158 34.2
RcHm_v2.0_Chr4g0433791 Rosa chinensis HOM05D000287 ORTHO05D000319 1.3e-12 77.4 160 35.0
FvH4_4g26210 Fragaria vesca HOM05D000287 ORTHO05D000319 6.4e-12 75.1 164 31.7
FAN12G2257 Fragaria x ananassa HOM05D000287 ORTHO05D000319 6.4e-12 75.1 164 31.7
FAN12G1788 Fragaria x ananassa HOM05D000287 ORTHO05D000319 8.3e-12 74.7 164 31.7
FAN17G0665 Fragaria x ananassa HOM05D000287 ORTHO05D000319 1.1e-11 74.3 164 31.7
Rhsim01G0194800 Rhododendron simsii HOM05D000287 ORTHO05D000319 1.4e-11 73.9 165 33.3
MD13G1029100 Malus domestica HOM05D000287 ORTHO05D000319 2.4e-11 73.2 166 33.7
MD13G1030800 Malus domestica HOM05D000287 ORTHO05D000319 2.4e-11 73.2 166 33.7
Rhsim02G0210700 Rhododendron simsii HOM05D000287 ORTHO05D000319 3.2e-11 72.8 155 32.9
Dinv31579 Davidia involucrata HOM05D000287 ORTHO05D178828 5.4e-11 72.0 52 69.2
RhsimUnG0100900 Rhododendron simsii HOM05D000287 ORTHO05D000319 3.5e-10 69.3 123 38.2
Dinv42515 Davidia involucrata HOM05D001696 ORTHO05D001746 4.6e-10 68.9 162 33.3
Rhsim04G0074400 Rhododendron simsii HOM05D000287 ORTHO05D000319 1.0e-09 67.8 167 34.7
RcHm_v2.0_Chr4g0433821 Rosa chinensis HOM05D000287 ORTHO05D000319 2.3e-09 66.6 156 32.1
Sopen02g018730 Solanum pennellii HOM05D000287 ORTHO05D000319 3.0e-09 66.2 84 44.0
FvH4_2g26650 Fragaria vesca HOM05D000287 ORTHO05D000319 6.6e-09 65.1 166 29.5
FAN20G2482 Fragaria x ananassa HOM05D000287 ORTHO05D000319 6.6e-09 65.1 166 30.1
TWI38G1062 Tripterygium wilfordii HOM05D000287 ORTHO05D000319 6.6e-09 65.1 156 30.8
FAN27G0302 Fragaria x ananassa HOM05D000287 ORTHO05D000319 8.6e-09 64.7 166 30.1
Rhsim02G0209200 Rhododendron simsii HOM05D000287 ORTHO05D000319 1.1e-08 64.3 166 33.7
RcHm_v2.0_Chr4g0393831 Rosa chinensis HOM05D000287 ORTHO05D000319 1.1e-08 64.3 149 32.2
TWI38G0023 Tripterygium wilfordii HOM05D000287 ORTHO05D000319 1.1e-08 64.3 156 30.8
RcHm_v2.0_Chr4g0393701 Rosa chinensis HOM05D000287 ORTHO05D000319 1.5e-08 63.9 156 32.1
PGSC0003DMG400021136 Solanum tuberosum HOM05D000287 ORTHO05D000319 1.9e-08 63.5 84 42.9
unitig_748.g7353 Utricularia gibba HOM05D000287 ORTHO05D000319 1.9e-08 63.5 82 42.7
FvH4_3g24410 Fragaria vesca HOM05D000287 ORTHO05D000319 2.5e-08 63.2 167 30.5
FAN11G2925 Fragaria x ananassa HOM05D000287 ORTHO05D000319 2.5e-08 63.2 167 30.5
FAN21G3520 Fragaria x ananassa HOM05D000287 ORTHO05D000319 2.5e-08 63.2 167 30.5
FAN16G3734 Fragaria x ananassa HOM05D000287 ORTHO05D000319 3.3e-08 62.8 167 30.5
RcHm_v2.0_Chr2g0129461 Rosa chinensis HOM05D000287 ORTHO05D000319 4.3e-08 62.4 157 31.2
Hund03219 Selenicereus undatus HOM05D000287 ORTHO05D000319 5.6e-08 62.0 147 33.3
RcHm_v2.0_Chr4g0433841 Rosa chinensis HOM05D000287 ORTHO05D000319 9.5e-08 61.2 156 30.1
CSS0012671 Camellia sinensis var. sinensis HOM05D000287 ORTHO05D000319 1.2e-07 60.8 154 30.5
CSS0000264 Camellia sinensis var. sinensis HOM05D000287 ORTHO05D000319 2.1e-07 60.1 166 27.1
CiPaw.16G117300 Carya illinoinensis HOM05D000287 ORTHO05D000319 2.1e-07 60.1 161 32.3
Aqoxy7G02539 Aquilegia oxysepala HOM05D000287 ORTHO05D000319 2.8e-07 59.7 155 29.7
Sc03g0010890 Simmondsia chinensis HOM05D000287 ORTHO05D000319 2.8e-07 59.7 165 28.5
Rhsim02G0209000 Rhododendron simsii HOM05D000287 ORTHO05D000319 3.6e-07 59.3 167 32.3
QL04p088875 Quercus lobata HOM05D000287 ORTHO05D000319 4.7e-07 58.9 132 32.6
CSS0021097 Camellia sinensis var. sinensis HOM05D000287 ORTHO05D000319 6.2e-07 58.5 142 28.9
MSTRG.19404 Avicennia marina HOM05D000287 ORTHO05D000319 8.0e-07 58.2 171 29.8
EL10Ac7g18120 Beta vulgaris HOM05D000287 ORTHO05D000319 8.0e-07 58.2 155 28.4
Actinidia25731 Actinidia chinensis HOM05D000287 ORTHO05D000319 1.8e-06 57.0 151 31.8
FAN17G0690 Fragaria x ananassa HOM05D000287 ORTHO05D000319 1.8e-06 57.0 74 43.2
Eucgr.C00059 Eucalyptus grandis HOM05D000287 ORTHO05D000319 4.0e-06 55.8 155 31.0
Aqoxy5G03838 Aquilegia oxysepala HOM05D000287 ORTHO05D000319 5.2e-06 55.5 167 28.1
Hma1.2p1_0321F.1_g124580 Hydrangea macrophylla HOM05D000287 ORTHO05D000319 5.2e-06 55.5 97 36.1
CSS0009618 Camellia sinensis var. sinensis HOM05D000287 ORTHO05D000319 6.8e-06 55.1 152 28.3
Duzib192G0751 Durio zibethinus HOM05D000287 ORTHO05D000319 6.8e-06 55.1 172 27.9
Lj5A798T57 Lonicera japonica HOM05D000287 ORTHO05D000319 6.8e-06 55.1 167 30.5
Lj4g0000127 Lotus japonicus HOM05D000287 ORTHO05D000319 6.8e-06 55.1 153 30.7
Duzib192G0065 Durio zibethinus HOM05D000287 ORTHO05D000319 8.9e-06 54.7 172 27.9
QL02p023848 Quercus lobata HOM05D000287 ORTHO05D000319 8.9e-06 54.7 156 30.1
TAR383G0206 Trochodendron aralioides HOM05D000287 ORTHO05D000319 8.9e-06 54.7 153 30.1
TAR623G0350 Trochodendron aralioides HOM05D000287 ORTHO05D000319 8.9e-06 54.7 170 28.8
VMungo0251G3097 Vigna mungo HOM05D000287 ORTHO05D000319 8.9e-06 54.7 140 30.0


User provided reference genes

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