Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv18156 Davidia involucrata HOM05D004744 ORTHO05D005655 3.2e-287 991.1 520 100.0
Lj8C731T12 Lonicera japonica HOM05D004744 ORTHO05D005655 3.6e-214 748.4 521 73.5
Actinidia13213 Actinidia chinensis HOM05D004744 ORTHO05D005655 1.5e-212 743.0 518 73.2
GSVIVG01035922001 Vitis vinifera HOM05D004744 ORTHO05D005655 9.2e-210 733.8 517 72.0
CSS0007985 Camellia sinensis var. sinensis HOM05D004744 ORTHO05D005655 1.7e-208 729.6 519 73.8
TAR625G1411 Trochodendron aralioides HOM05D004744 ORTHO05D005655 1.1e-207 726.9 517 71.2
Rhsim02G0205700 Rhododendron simsii HOM05D004744 ORTHO05D005655 2.4e-202 709.1 518 71.0
QL02p020429 Quercus lobata HOM05D004744 ORTHO05D005655 1.6e-201 706.4 518 69.9
Ciclev10007726m.g Citrus clementina HOM05D004744 ORTHO05D005655 2.4e-197 692.6 518 67.6
Atru.chr7.2497 Acer truncatum HOM05D004744 ORTHO05D005655 2.6e-196 689.1 509 69.5
Cfa013106 Carpinus fangiana HOM05D004744 ORTHO05D005655 9.9e-196 687.2 518 68.5
Thecc.09G019800 Theobroma cacao HOM05D004744 ORTHO05D005655 2.2e-195 686.0 518 68.7
Nitab4.5_0002992g0040 Nicotiana tabacum HOM05D004744 ORTHO05D005655 4.6e-193 678.3 522 67.0
Potri.018G022800 Populus trichocarpa HOM05D004744 ORTHO05D005655 2.5e-191 672.5 519 66.5
Gohir.D06G101900 Gossypium hirsutum HOM05D004744 ORTHO05D005655 7.3e-191 671.0 518 68.0
CiPaw.08G008500 Carya illinoinensis HOM05D004744 ORTHO05D005655 1.6e-190 669.8 518 66.6
Sopen08g011940 Solanum pennellii HOM05D004744 ORTHO05D005655 1.6e-190 669.8 522 65.7
Eucgr.C01702 Eucalyptus grandis HOM05D004744 ORTHO05D005655 3.6e-190 668.7 518 66.6
CAN.G326.4 Capsicum annuum HOM05D004744 ORTHO05D005655 5.3e-189 664.8 522 65.1
Gorai.010G116900 Gossypium raimondii HOM05D004744 ORTHO05D005655 5.3e-189 664.8 523 67.3
MD15G1130500 Malus domestica HOM05D004744 ORTHO05D005655 2.6e-188 662.5 518 65.6
Sc20g0001320 Simmondsia chinensis HOM05D004744 ORTHO05D005655 3.2e-186 655.6 516 66.1
Sabra18G0025200 Salix brachista HOM05D004744 ORTHO05D005655 5.4e-186 654.8 519 65.1
Oeu033353.1 Olea europaea HOM05D004744 ORTHO05D005655 9.3e-186 654.1 518 67.6
Manes.03G012200 Manihot esculenta HOM05D004744 ORTHO05D005655 2.4e-181 639.4 515 63.7
Lsat_1_v5_gn_1_43821 Lactuca sativa HOM05D004744 ORTHO05D005655 4.0e-181 638.6 518 65.3
CANSAT01G0649 Cannabis sativa HOM05D004744 ORTHO05D005655 1.2e-180 637.1 518 62.0
Haze_21464 Corylus avellana HOM05D004744 ORTHO05D005655 1.2e-180 637.1 548 62.4
Lj1g0018058 Lotus japonicus HOM05D004744 ORTHO05D005655 3.4e-180 635.6 518 62.2
Aqoxy7G03541 Aquilegia oxysepala HOM05D004744 ORTHO05D005655 9.9e-180 634.0 520 62.1
PGR142G3966 Punica granatum HOM05D004744 ORTHO05D005655 1.7e-179 633.3 524 62.4
FAN24G2392 Fragaria x ananassa HOM05D004744 ORTHO05D005655 3.8e-179 632.1 520 61.7
FvH4_2g28330 Fragaria vesca HOM05D004744 ORTHO05D005655 2.4e-178 629.4 520 61.3
FAN20G1207 Fragaria x ananassa HOM05D004744 ORTHO05D005655 1.2e-177 627.1 520 61.0
TWI32G0623 Tripterygium wilfordii HOM05D004744 ORTHO05D005655 3.5e-177 625.5 478 66.9
Lalb_Chr08g0244261 Lupinus albus HOM05D004744 ORTHO05D005655 1.8e-176 623.2 520 61.0
Psat5g030800 Pisum sativum HOM05D004744 ORTHO05D005655 5.1e-176 621.7 518 61.0
Ca_15759_v3 Cicer arietinum L. HOM05D004744 ORTHO05D005655 6.7e-176 621.3 518 60.6
PSO063G6514 Papaver somniferum HOM05D004744 ORTHO05D005655 6.7e-176 621.3 524 62.4
RcHm_v2.0_Chr6g0297241 Rosa chinensis HOM05D004744 ORTHO05D005655 1.1e-175 620.5 519 60.7
HanXRQChr01g0030631 Helianthus annuus HOM05D004744 ORTHO05D005655 4.3e-175 618.6 518 63.3
THA.LOC104805576 Tarenaya hassleriana HOM05D004744 ORTHO05D005655 4.3e-175 618.6 519 62.6
Migut.A00009 Erythranthe guttata HOM05D004744 ORTHO05D005655 1.1e-173 614.0 525 62.5
FAN27G1080 Fragaria x ananassa HOM05D004744 ORTHO05D005655 1.1e-173 614.0 518 59.8
Cc08_g00230 Coffea canephora HOM05D004744 ORTHO05D005655 2.4e-173 612.8 522 61.3
Solyc08g041780.3 Solanum lycopersicum HOM05D004744 ORTHO05D005655 2.0e-172 609.8 522 61.3
Prupe.1G485900 Prunus persica HOM05D004744 ORTHO05D005655 3.4e-172 609.0 518 62.2
arahy.Tifrunner.gnm1.ann1.8I84Z2 Arachis hypogaea HOM05D004744 ORTHO05D005655 2.2e-171 606.3 520 59.8
Nn8g39704 Nelumbo nucifera HOM05D004744 ORTHO05D005655 4.9e-171 605.1 472 65.3
Nitab4.5_0005958g0020 Nicotiana tabacum HOM05D004744 ORTHO05D005655 1.4e-170 603.6 504 62.9
MSTRG.11596 Avicennia marina HOM05D004744 ORTHO05D005655 3.2e-170 602.4 523 62.0
Glyma.02G173300 Glycine max HOM05D004744 ORTHO05D005655 3.2e-170 602.4 520 59.6
ECA248G1191 Erigeron canadensis HOM05D004744 ORTHO05D005655 4.2e-170 602.1 513 61.4
arahy.Tifrunner.gnm1.ann1.LGG0U4 Arachis hypogaea HOM05D004744 ORTHO05D005655 5.5e-170 601.7 520 60.0
Glyma.02G001200 Glycine max HOM05D004744 ORTHO05D005655 1.6e-169 600.1 520 60.0
Gohir.A06G099700 Gossypium hirsutum HOM05D004744 ORTHO05D005655 1.3e-168 597.0 463 67.0
Thhalv10024640m.g Eutrema salsugineum HOM05D004744 ORTHO05D005655 3.0e-168 595.9 513 60.8
MELO3C016990.2 Cucumis melo HOM05D004744 ORTHO05D005655 1.5e-167 593.6 519 60.1
SGA_v2.0_scaffold64G21986 Striga asiatica HOM05D004744 ORTHO05D005655 1.5e-167 593.6 543 60.4
VMungo0720G0351 Vigna mungo HOM05D004744 ORTHO05D005655 2.5e-167 592.8 520 58.3
Sp7g29850 Schrenkiella parvula HOM05D004744 ORTHO05D005655 1.6e-166 590.1 513 61.8
BcaNung03134 Brassica carinata HOM05D004744 ORTHO05D005655 2.8e-166 589.3 515 60.4
Aa31LG2G18030 Aethionema arabicum HOM05D004744 ORTHO05D005655 2.4e-165 586.3 508 61.4
CARHR239950 Cardamine hirsuta HOM05D004744 ORTHO05D005655 3.1e-165 585.9 507 60.6
CsaV3_4G036900 Cucumis sativus L. HOM05D004744 ORTHO05D005655 9.0e-165 584.3 518 59.7
AL7G19840 Arabidopsis lyrata HOM05D004744 ORTHO05D005655 2.6e-164 582.8 513 60.2
TPR.G3127 Trifolium pratense HOM05D004744 ORTHO05D005655 3.4e-164 582.4 559 54.4
Carub.0007s0850 Capsella rubella HOM05D004744 ORTHO05D005655 4.5e-164 582.0 513 60.8
C01p06880 Brassica napus HOM05D004744 ORTHO05D005655 7.6e-164 581.3 517 60.3
BraA01t00591Z Brassica rapa HOM05D004744 ORTHO05D005655 1.0e-163 580.9 515 59.6
BcaC09g51994 Brassica carinata HOM05D004744 ORTHO05D005655 1.3e-163 580.5 517 60.3
BolC1t00685H Brassica oleracea HOM05D004744 ORTHO05D005655 1.3e-163 580.5 517 60.3
vmacro11210 Vaccinium macrocarpon HOM05D004744 ORTHO05D005655 1.7e-163 580.1 403 74.9
A01p06240 Brassica napus HOM05D004744 ORTHO05D005655 2.2e-163 579.7 515 59.6
vmacro11211 Vaccinium macrocarpon HOM05D004744 ORTHO05D005655 3.8e-163 578.9 403 74.7
Phvul.007G279700 Phaseolus vulgaris HOM05D004744 ORTHO05D005655 5.0e-163 578.6 532 57.3
Medtr3g106410 Medicago truncatula HOM05D004744 ORTHO05D005655 1.1e-162 577.4 518 57.3
Sed0024238 Sechium edule HOM05D004744 ORTHO05D005655 1.9e-162 576.6 518 59.7
DCAR_000582 Daucus carota HOM05D004744 ORTHO05D005655 2.3e-160 569.7 511 57.9
CDE05G1537 Ceratophyllum demersum HOM05D004744 ORTHO05D005655 1.4e-157 560.5 518 57.5
AT4G32050 Arabidopsis thaliana HOM05D004744 ORTHO05D005655 7.7e-156 554.7 513 58.9
AUR62015365 Chenopodium quinoa HOM05D004744 ORTHO05D005655 1.1e-151 540.8 501 55.3
Cpa.g.sc187.24 Carica papaya HOM05D004744 ORTHO05D005655 1.3e-150 537.3 426 66.9
EL10Ac3g06914 Beta vulgaris HOM05D004744 ORTHO05D005655 4.8e-150 535.4 519 54.1
AUR62012029 Chenopodium quinoa HOM05D004744 ORTHO05D005655 1.2e-148 530.8 482 57.1
ClCG05G016620 Citrullus lanatus HOM05D004744 ORTHO05D005655 1.5e-148 530.4 523 56.4
ATR0767G197 Amborella trichopoda HOM05D004744 ORTHO05D005655 4.7e-145 518.8 513 54.0
Eucgr.C01625 Eucalyptus grandis HOM05D004744 ORTHO05D005655 1.7e-142 510.4 390 66.2
CAN.G435.2 Capsicum annuum HOM05D004744 ORTHO05D005655 2.2e-142 510.0 415 63.9
Lj1g0024423 Lotus japonicus HOM05D004744 ORTHO05D005655 1.8e-141 506.9 523 53.3
BcaC06g30946 Brassica carinata HOM05D004744 ORTHO05D005655 1.1e-138 497.7 515 54.0
Os02g0798700 Oryza sativa ssp. japonica HOM05D004744 ORTHO05D005655 1.1e-135 487.6 521 49.5
RcHm_v2.0_Chr2g0139901 Rosa chinensis HOM05D004744 ORTHO05D005655 1.7e-134 483.8 494 55.7
HPP92_003269 Vanilla planifolia HOM05D004744 ORTHO05D005655 6.5e-131 471.9 519 48.7
Zm00001eb257970 Zea mays HOM05D004744 ORTHO05D005655 1.1e-125 454.5 479 49.9
COL.COLO4_18910 Corchorus olitorius HOM05D004744 ORTHO05D005655 1.6e-121 440.7 335 69.9
TPR.G21273 Trifolium pratense HOM05D004744 ORTHO05D005655 7.5e-119 431.8 516 46.9
Hund06750 Selenicereus undatus HOM05D004744 ORTHO05D005655 4.5e-116 422.5 548 45.3
TPR.G21279 Trifolium pratense HOM05D004744 ORTHO05D005655 4.7e-113 412.5 513 46.8
Peaxi162Scf00116g00091 Petunia axillaris HOM05D004744 ORTHO05D005655 6.8e-88 328.9 259 66.8
vmacro12150 Vaccinium macrocarpon HOM05D000172 ORTHO05D000781 3.2e-85 320.1 367 52.0
Peaxi162Scf00116g00915 Petunia axillaris HOM05D004744 ORTHO05D005655 1.1e-80 305.1 263 59.3
BcaC06g33762 Brassica carinata HOM05D004744 ORTHO05D005655 2.2e-78 297.4 380 47.9
C07p37210 Brassica napus HOM05D004744 ORTHO05D005655 2.1e-76 290.8 504 40.5
BolC7t44231H Brassica oleracea HOM05D004744 ORTHO05D005655 2.1e-76 290.8 504 40.5
Pp3c12_9830 Physcomitrium patens HOM05D004744 ORTHO05D005655 2.3e-67 260.8 520 31.7
unitig_0.g2772 Utricularia gibba HOM05D004744 ORTHO05D005655 6.9e-64 249.2 525 35.6
TPR.G18367 Trifolium pratense HOM05D004744 ORTHO05D005655 7.1e-61 239.2 270 49.6
BraA06t26993Z Brassica rapa HOM05D004744 ORTHO05D005655 1.5e-55 221.5 262 48.1
Mapoly0033s0067 Marchantia polymorpha HOM05D004744 ORTHO05D005655 4.5e-55 219.9 531 29.2
A06p40720 Brassica napus HOM05D004744 ORTHO05D005655 1.3e-54 218.4 262 47.7
SMO134G0198 Selaginella moellendorffii HOM05D004744 ORTHO05D005655 6.0e-52 209.5 507 29.8
AagrBONN_evm.TU.Sc2ySwM_117.465 Anthoceros agrestis HOM05D004744 ORTHO05D005655 2.8e-49 200.7 394 34.0
PGSC0003DMG400015627 Solanum tuberosum HOM05D004744 ORTHO05D005655 1.3e-46 191.8 151 62.9
GSVIVG01011258001 Vitis vinifera HOM05D004744 ORTHO05D005655 2.5e-42 177.6 130 71.5
DCAR_000575 Daucus carota HOM05D004744 ORTHO05D005655 9.7e-42 175.6 143 62.2
Ah.14g079390 Amaranthus hybridus HOM05D004744 ORTHO05D005655 1.4e-40 171.8 222 45.9
BcaC06g30944 Brassica carinata HOM05D004744 ORTHO05D005655 1.3e-38 165.2 165 52.1
DCAR_000580 Daucus carota HOM05D004744 ORTHO05D005655 1.7e-38 164.9 168 50.0
SEGI_40333 Sequoiadendron giganteum HOM05D004744 ORTHO05D005655 3.9e-35 153.7 141 56.0
Pp3c4_13414 Physcomitrium patens HOM05D004744 ORTHO05D005655 2.4e-32 144.4 324 31.5
FvH4_6g32120 Fragaria vesca HOM05D004744 ORTHO05D005655 1.9e-29 134.8 278 36.3
FAN14G1088 Fragaria x ananassa HOM05D004744 ORTHO05D005655 5.3e-24 116.7 124 55.6
FAN09G4690 Fragaria x ananassa HOM05D004744 ORTHO05D005655 3.5e-23 114.0 243 36.6
DCAR_000578 Daucus carota HOM05D004744 ORTHO05D005655 5.9e-23 113.2 120 48.3
SEGI_39231 Sequoiadendron giganteum HOM05D004744 ORTHO05D005655 6.5e-22 109.8 151 39.7
BolC8t47068H Brassica oleracea HOM05D004744 ORTHO05D005655 4.2e-21 107.1 115 52.2
C08p49950 Brassica napus HOM05D004744 ORTHO05D005655 1.2e-20 105.5 111 54.1
Cpa.g.sc187.23 Carica papaya HOM05D004744 ORTHO05D005655 3.6e-20 104.0 88 59.1
BcaC07g41939 Brassica carinata HOM05D004744 ORTHO05D005655 6.1e-20 103.2 107 55.1
COL.COLO4_18909 Corchorus olitorius HOM05D004744 ORTHO05D005655 1.1e-16 92.4 81 59.3
CBR_g34813 Chara braunii HOM05D004744 ORTHO05D005655 2.7e-15 87.8 272 26.5
Ah.14g079380 Amaranthus hybridus HOM05D004744 ORTHO05D005655 4.7e-12 77.0 83 47.0
unitig_748.g7861 Utricularia gibba HOM05D004744 ORTHO05D005655 2.3e-11 74.7 73 54.8
TWI63G1552 Tripterygium wilfordii HOM05D004744 ORTHO05D005655 6.8e-11 73.2 88 47.7
C08p02720 Brassica napus HOM05D004744 ORTHO05D005655 1.5e-10 72.0 70 55.7
SEGI_00815 Sequoiadendron giganteum HOM05D004744 ORTHO05D005655 2.2e-09 68.2 89 39.3
SEGI_08303 Sequoiadendron giganteum HOM05D004744 ORTHO05D005655 2.2e-09 68.2 64 51.6
Lsat_1_v5_gn_7_37280 Lactuca sativa HOM05D002279 ORTHO05D017063 1.8e-08 65.1 54 53.7
Rhsim01G0220500 Rhododendron simsii HOM05D004744 ORTHO05D005655 9.1e-08 62.8 50 66.0
SEGI_21256 Sequoiadendron giganteum HOM05D004744 ORTHO05D005655 1.6e-07 62.0 73 43.8
unitig_60.g25872 Utricularia gibba HOM05D004744 ORTHO05D005655 1.6e-07 62.0 47 63.8
CsaV3_4G016180 Cucumis sativus L. HOM05D004744 ORTHO05D005655 3.5e-07 60.8 43 62.8
MELO3C032098.2 Cucumis melo HOM05D004744 ORTHO05D005655 4.5e-07 60.5 42 61.9
CsaV3_5G015120 Cucumis sativus L. HOM05D004744 ORTHO05D005655 8.5e-06 56.2 33 78.8


User provided reference genes

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