Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv18131 Davidia involucrata HOM05D000022 ORTHO05D010901 1.9e-71 272.3 129 100.0
Nn2g14207 Nelumbo nucifera HOM05D048985 ORTHO05D010901 1.5e-20 103.2 105 45.7
Zm00001eb221320 Zea mays HOM05D036183 ORTHO05D010901 2.3e-16 89.4 88 42.0
ECA236G3681 Erigeron canadensis HOM05D011018 ORTHO05D010901 1.8e-13 79.7 80 48.8
Dinv05630 Davidia involucrata HOM05D000022 ORTHO05D010901 4.0e-13 78.6 36 97.2
Glyma.10G121900 Glycine max HOM05D000023 ORTHO05D000014 5.2e-13 78.2 81 43.2
Glyma.17G215100 Glycine max HOM05D000023 ORTHO05D000014 6.8e-13 77.8 77 45.5
Glyma.01G121600 Glycine max HOM05D000023 ORTHO05D000014 8.9e-13 77.4 81 43.2
Glyma.20G074600 Glycine max HOM05D000023 ORTHO05D000014 8.9e-13 77.4 81 43.2
Glyma.09G104100 Glycine max HOM05D000023 ORTHO05D000014 1.2e-12 77.0 81 43.2
Glyma.12G152900 Glycine max HOM05D000023 ORTHO05D000014 1.2e-12 77.0 82 42.7
Glyma.13G192700 Glycine max HOM05D000023 ORTHO05D000014 1.2e-12 77.0 81 43.2
Zm00001eb243670 Zea mays HOM05D036183 ORTHO05D010901 1.2e-12 77.0 91 35.2
Glyma.20G072800 Glycine max HOM05D000023 ORTHO05D000014 2.0e-12 76.3 81 43.2
CSS0005925 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 3.4e-12 75.5 73 45.2
Dinv08249 Davidia involucrata HOM05D000022 ORTHO05D010901 3.4e-12 75.5 35 94.3
Zm00001eb349030 Zea mays HOM05D000023 ORTHO05D000014 4.4e-12 75.1 91 38.5
Glyma.06G230700 Glycine max HOM05D000023 ORTHO05D000014 5.8e-12 74.7 73 45.2
MBI09_g17303_MAGBIO Magnolia biondii HOM05D011018 ORTHO05D010901 7.5e-12 74.3 78 47.4
Glyma.04G163700 Glycine max HOM05D000023 ORTHO05D000014 1.3e-11 73.6 81 43.2
Zm00001eb398480 Zea mays HOM05D000023 ORTHO05D010901 1.3e-11 73.6 79 36.7
PSO170G4702 Papaver somniferum HOM05D000023 ORTHO05D000014 1.7e-11 73.2 89 42.7
Glyma.08G294500 Glycine max HOM05D000023 ORTHO05D000014 2.2e-11 72.8 70 44.3
MBI19_g38778_MAGBIO Magnolia biondii HOM05D011018 ORTHO05D010901 2.2e-11 72.8 81 43.2
MBI02_g15960_MAGBIO Magnolia biondii HOM05D011018 ORTHO05D010901 2.9e-11 72.4 81 44.4
Dinv10385 Davidia involucrata HOM05D000022 ORTHO05D010901 3.7e-11 72.0 42 76.2
Glyma.02G159600 Glycine max HOM05D000023 ORTHO05D000014 3.7e-11 72.0 67 46.3
Hma1.2p1_0490F.1_g164210 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 3.7e-11 72.0 110 37.3
MSTRG.23368 Avicennia marina HOM05D000023 ORTHO05D000014 6.4e-11 71.2 79 46.8
Glyma.15G205800 Glycine max HOM05D000023 ORTHO05D000014 8.3e-11 70.9 130 33.8
Zm00001eb252520 Zea mays HOM05D004043 ORTHO05D002193 8.3e-11 70.9 86 37.2
Dinv18929 Davidia involucrata HOM05D000022 ORTHO05D000306 1.1e-10 70.5 38 81.6
Glyma.19G102600 Glycine max HOM05D000023 ORTHO05D000014 1.4e-10 70.1 82 41.5
PSO339G6217 Papaver somniferum HOM05D000023 ORTHO05D000014 1.4e-10 70.1 76 43.4
Hma1.2p1_2277F.1_g318670 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 2.4e-10 69.3 110 37.3
MBI05_g24575_MAGBIO Magnolia biondii HOM05D011018 ORTHO05D010901 2.4e-10 69.3 81 43.2
MBI07_g22389_MAGBIO Magnolia biondii HOM05D011018 ORTHO05D010901 3.2e-10 68.9 83 43.4
Glyma.07G163900 Glycine max HOM05D000023 ORTHO05D000014 4.1e-10 68.6 81 38.3
QL02p096245 Quercus lobata HOM05D000023 ORTHO05D000014 4.1e-10 68.6 68 42.6
MBI10_g23657_MAGBIO Magnolia biondii HOM05D011018 ORTHO05D010901 5.4e-10 68.2 81 43.2
Atru.chr9.374 Acer truncatum HOM05D000023 ORTHO05D000014 7.0e-10 67.8 77 39.0
Nn1g01508 Nelumbo nucifera HOM05D000023 ORTHO05D012305 7.0e-10 67.8 104 35.6
Aqoxy5G01955 Aquilegia oxysepala HOM05D009083 ORTHO05D010901 9.2e-10 67.4 75 41.3
Glyma.09G000200 Glycine max HOM05D000023 ORTHO05D000014 1.2e-09 67.0 73 42.5
SGA_v2.0_scaffold327G48774 Striga asiatica HOM05D000023 ORTHO05D000014 1.2e-09 67.0 71 43.7
QL11p007092 Quercus lobata HOM05D000412 ORTHO05D000429 1.6e-09 66.6 78 39.7
Sed0008376 Sechium edule HOM05D000023 ORTHO05D000014 2.7e-09 65.9 74 37.8
Glyma.18G099100 Glycine max HOM05D000023 ORTHO05D000014 3.5e-09 65.5 67 44.8
SHI03890 Sapria himalayana HOM05D000023 ORTHO05D000014 3.5e-09 65.5 68 45.6
Glyma.09G064900 Glycine max HOM05D000023 ORTHO05D000014 4.6e-09 65.1 82 36.6
Glyma.14G162700 Glycine max HOM05D000023 ORTHO05D000014 4.6e-09 65.1 67 43.3
Rhsim06G0070600 Rhododendron simsii HOM05D000023 ORTHO05D000014 4.6e-09 65.1 77 39.0
THA.LOC104804899 Tarenaya hassleriana HOM05D000023 ORTHO05D000014 7.8e-09 64.3 83 42.2
Sopen10g005310 Solanum pennellii HOM05D000023 ORTHO05D000014 1.0e-08 63.9 101 36.6
SGA_v2.0_scaffold17G08089 Striga asiatica HOM05D000023 ORTHO05D000014 1.0e-08 63.9 71 42.3
Lj1g0008556 Lotus japonicus HOM05D000023 ORTHO05D000014 1.3e-08 63.5 71 38.0
Solyc10g047760.1 Solanum lycopersicum HOM05D000023 ORTHO05D010901 1.3e-08 63.5 56 50.0
CSS0049915 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 1.7e-08 63.2 79 31.6
Sopen10g007400 Solanum pennellii HOM05D000023 ORTHO05D000014 1.7e-08 63.2 94 38.3
Rhsim03G0126000 Rhododendron simsii HOM05D000023 ORTHO05D000014 2.3e-08 62.8 59 44.1
SGA_v2.0_scaffold281G46900 Striga asiatica HOM05D000023 ORTHO05D000014 2.3e-08 62.8 89 36.0
TPR.G8629 Trifolium pratense HOM05D000023 ORTHO05D000014 2.3e-08 62.8 76 36.8
SHI21514 Sapria himalayana HOM05D000023 ORTHO05D000014 3.0e-08 62.4 68 42.6
Hund11026 Selenicereus undatus HOM05D000023 ORTHO05D000014 3.0e-08 62.4 74 40.5
Dinv16938 Davidia involucrata HOM05D000022 ORTHO05D004107 5.0e-08 61.6 26 100.0
Os10g0549900 Oryza sativa ssp. japonica HOM05D000023 ORTHO05D000014 5.0e-08 61.6 99 35.4
SHI16918 Sapria himalayana HOM05D003924 ORTHO05D005216 5.0e-08 61.6 76 38.2
Sopen01g010490 Solanum pennellii HOM05D000023 ORTHO05D000014 5.0e-08 61.6 67 44.8
Os12g0537000 Oryza sativa ssp. japonica HOM05D000023 ORTHO05D000014 6.6e-08 61.2 99 33.3
Hund04838 Selenicereus undatus HOM05D000023 ORTHO05D000014 6.6e-08 61.2 74 40.5
Hund18264 Selenicereus undatus HOM05D000023 ORTHO05D000014 6.6e-08 61.2 91 37.4
Dinv32095 Davidia involucrata HOM05D009083 ORTHO05D011928 8.6e-08 60.8 91 36.3
QL04p080373 Quercus lobata HOM05D000023 ORTHO05D000014 8.6e-08 60.8 68 39.7
Hund10515 Selenicereus undatus HOM05D000023 ORTHO05D000014 8.6e-08 60.8 74 40.5
Os01g0379800 Oryza sativa ssp. japonica HOM05D000023 ORTHO05D000014 1.1e-07 60.5 99 33.3
Os05g0232800 Oryza sativa ssp. japonica HOM05D000023 ORTHO05D000014 1.1e-07 60.5 99 33.3
Os05g0256350 Oryza sativa ssp. japonica HOM05D000023 ORTHO05D000014 1.1e-07 60.5 99 33.3
Os12g0538000 Oryza sativa ssp. japonica HOM05D000023 ORTHO05D000014 1.1e-07 60.5 99 33.3
Os12g0538066 Oryza sativa ssp. japonica HOM05D000023 ORTHO05D000014 1.1e-07 60.5 99 33.3
THA.LOC104820419 Tarenaya hassleriana HOM05D000023 ORTHO05D000014 1.1e-07 60.5 67 43.3
Glyma.03G080400 Glycine max HOM05D000023 ORTHO05D000014 1.5e-07 60.1 54 46.3
Glyma.04G117600 Glycine max HOM05D000023 ORTHO05D000014 1.5e-07 60.1 54 46.3
Os01g0722550 Oryza sativa ssp. japonica HOM05D000023 ORTHO05D000014 1.5e-07 60.1 99 33.3
SHI25011 Sapria himalayana HOM05D000023 ORTHO05D000014 1.5e-07 60.1 68 41.2
Sopen01g050040 Solanum pennellii HOM05D000023 ORTHO05D000014 1.5e-07 60.1 94 37.2
arahy.Tifrunner.gnm1.ann1.WBP0IL Arachis hypogaea HOM05D000023 ORTHO05D012305 1.9e-07 59.7 78 37.2
Dinv18192 Davidia involucrata HOM05D009083 ORTHO05D011928 1.9e-07 59.7 77 36.4
FvH4_4g22271 Fragaria vesca HOM05D000047 ORTHO05D001383 1.9e-07 59.7 72 37.5
Dinv02991 Davidia involucrata HOM05D009083 ORTHO05D011928 2.5e-07 59.3 91 35.2
Dinv06593 Davidia involucrata HOM05D009083 ORTHO05D011928 2.5e-07 59.3 91 35.2
MBI01_g05546_MAGBIO Magnolia biondii HOM05D011018 ORTHO05D010901 2.5e-07 59.3 71 43.7
Hund22686 Selenicereus undatus HOM05D000023 ORTHO05D000014 2.5e-07 59.3 97 36.1
arahy.Tifrunner.gnm1.ann1.13TSAR Arachis hypogaea HOM05D000023 ORTHO05D000014 3.3e-07 58.9 77 36.4
Lj2g0024203 Lotus japonicus HOM05D000023 ORTHO05D000014 3.3e-07 58.9 95 35.8
Nitab4.5_0002586g0050 Nicotiana tabacum HOM05D000023 ORTHO05D002750 3.3e-07 58.9 74 37.8
PSO782G1185 Papaver somniferum HOM05D000023 ORTHO05D000014 3.3e-07 58.9 74 36.5
Hund04442 Selenicereus undatus HOM05D000023 ORTHO05D000014 3.3e-07 58.9 74 39.2
Hund13150 Selenicereus undatus HOM05D000023 ORTHO05D000014 3.3e-07 58.9 73 39.7
Hund24696 Selenicereus undatus HOM05D000023 ORTHO05D000014 3.3e-07 58.9 91 36.3
Hund24914 Selenicereus undatus HOM05D000023 ORTHO05D000014 3.3e-07 58.9 114 32.5
Dinv14196 Davidia involucrata HOM05D009083 ORTHO05D005075 4.3e-07 58.5 91 35.2
Rhsim03G0092200 Rhododendron simsii HOM05D000023 ORTHO05D000014 4.3e-07 58.5 59 42.4
Rhsim09G0063600 Rhododendron simsii HOM05D000023 ORTHO05D000014 4.3e-07 58.5 59 42.4
Rhsim13G0106300 Rhododendron simsii HOM05D000023 ORTHO05D000014 4.3e-07 58.5 59 42.4
Rhsim13G0148100 Rhododendron simsii HOM05D000023 ORTHO05D000014 4.3e-07 58.5 59 42.4
Glyma.16G099000 Glycine max HOM05D000023 ORTHO05D000014 5.6e-07 58.2 82 36.6
Hund04194 Selenicereus undatus HOM05D000023 ORTHO05D000014 5.6e-07 58.2 95 33.7
Hund05820 Selenicereus undatus HOM05D000023 ORTHO05D000014 5.6e-07 58.2 95 33.7
Hund10386 Selenicereus undatus HOM05D000023 ORTHO05D000014 5.6e-07 58.2 95 33.7
Hund15093 Selenicereus undatus HOM05D000023 ORTHO05D000014 5.6e-07 58.2 95 33.7
Hund22984 Selenicereus undatus HOM05D000023 ORTHO05D000014 5.6e-07 58.2 95 33.7
Hund23411 Selenicereus undatus HOM05D000023 ORTHO05D000014 5.6e-07 58.2 95 33.7
Hund25526 Selenicereus undatus HOM05D000023 ORTHO05D000014 5.6e-07 58.2 95 33.7
Hund26626 Selenicereus undatus HOM05D000023 ORTHO05D000014 5.6e-07 58.2 95 33.7
Hund31071 Selenicereus undatus HOM05D000023 ORTHO05D000014 5.6e-07 58.2 95 33.7
Dinv08694 Davidia involucrata HOM05D009083 ORTHO05D011928 7.3e-07 57.8 91 34.1
Dinv19667 Davidia involucrata HOM05D013973 ORTHO05D009195 7.3e-07 57.8 113 36.3
Dinv24563 Davidia involucrata HOM05D009083 ORTHO05D011928 7.3e-07 57.8 91 34.1
Dinv36737 Davidia involucrata HOM05D009083 ORTHO05D011928 7.3e-07 57.8 91 35.2
ECA232G3793 Erigeron canadensis HOM05D000023 ORTHO05D000014 7.3e-07 57.8 127 29.9
FvH4_5g39742 Fragaria vesca HOM05D000023 ORTHO05D000014 7.3e-07 57.8 72 36.1
HanXRQChr07g0186221 Helianthus annuus HOM05D000023 ORTHO05D000014 7.3e-07 57.8 82 34.1
Lj8P661T5 Lonicera japonica HOM05D000023 ORTHO05D002750 7.3e-07 57.8 76 31.6
Rhsim01G0126200 Rhododendron simsii HOM05D000023 ORTHO05D000014 7.3e-07 57.8 101 30.7
SHI30372 Sapria himalayana HOM05D000023 ORTHO05D000014 7.3e-07 57.8 69 42.0
Hund00488 Selenicereus undatus HOM05D000023 ORTHO05D000014 7.3e-07 57.8 88 38.6
Hund18176 Selenicereus undatus HOM05D000023 ORTHO05D000014 7.3e-07 57.8 95 32.6
Hund24099 Selenicereus undatus HOM05D000023 ORTHO05D000014 7.3e-07 57.8 74 39.2
Hund31004 Selenicereus undatus HOM05D000023 ORTHO05D000014 7.3e-07 57.8 74 39.2
FvH4_6g06672 Fragaria vesca HOM05D000023 ORTHO05D009195 9.5e-07 57.4 103 33.0
Lj8P655T9 Lonicera japonica HOM05D000023 ORTHO05D002750 9.5e-07 57.4 76 31.6
Lj4g0005907 Lotus japonicus HOM05D000023 ORTHO05D000014 9.5e-07 57.4 77 36.4
Rhsim05G0053400 Rhododendron simsii HOM05D000023 ORTHO05D009195 9.5e-07 57.4 59 40.7
Rhsim09G0032000 Rhododendron simsii HOM05D000023 ORTHO05D000014 9.5e-07 57.4 101 32.7
Hund06285 Selenicereus undatus HOM05D000023 ORTHO05D000014 9.5e-07 57.4 95 33.7
Hund13497 Selenicereus undatus HOM05D000023 ORTHO05D000014 9.5e-07 57.4 95 33.7
AL1G48110 Arabidopsis lyrata HOM05D000023 ORTHO05D000014 1.2e-06 57.0 118 28.0
arahy.Tifrunner.gnm1.ann1.YG44LD Arachis hypogaea HOM05D000023 ORTHO05D000014 1.2e-06 57.0 78 35.9
Lj1P332T15 Lonicera japonica HOM05D000023 ORTHO05D000014 1.2e-06 57.0 76 31.6
Lj6P498T15 Lonicera japonica HOM05D000023 ORTHO05D002750 1.2e-06 57.0 76 31.6
Lj1g0014944 Lotus japonicus HOM05D000023 ORTHO05D000014 1.2e-06 57.0 94 34.0
Rhsim01G0206700 Rhododendron simsii HOM05D000023 ORTHO05D000014 1.2e-06 57.0 59 40.7
Hund01885 Selenicereus undatus HOM05D000023 ORTHO05D000014 1.2e-06 57.0 91 35.2
Hund14805 Selenicereus undatus HOM05D000023 ORTHO05D000014 1.2e-06 57.0 95 33.7
Hund11626 Selenicereus undatus HOM05D000023 ORTHO05D000014 1.6e-06 56.6 95 32.6
Hund12079 Selenicereus undatus HOM05D000023 ORTHO05D000014 1.6e-06 56.6 95 32.6
Hund23957 Selenicereus undatus HOM05D000023 ORTHO05D000014 1.6e-06 56.6 95 32.6
Lj9C56T3 Lonicera japonica HOM05D000023 ORTHO05D002750 2.1e-06 56.2 84 29.8
Nn1g09269 Nelumbo nucifera HOM05D000023 ORTHO05D000014 2.1e-06 56.2 76 36.8
PSO040G0032 Papaver somniferum HOM05D000023 ORTHO05D000014 2.1e-06 56.2 74 33.8
PSO384G1898 Papaver somniferum HOM05D000023 ORTHO05D000014 2.1e-06 56.2 74 33.8
PSO384G2712 Papaver somniferum HOM05D000023 ORTHO05D000014 2.1e-06 56.2 74 33.8
Hund15138 Selenicereus undatus HOM05D000023 ORTHO05D000014 2.1e-06 56.2 78 38.5
arahy.Tifrunner.gnm1.ann1.4ZUM9H Arachis hypogaea HOM05D000023 ORTHO05D012305 2.8e-06 55.8 78 35.9
FvH4_3g29752 Fragaria vesca HOM05D000023 ORTHO05D009195 2.8e-06 55.8 78 34.6
Lj5g0017561 Lotus japonicus HOM05D000023 ORTHO05D000014 2.8e-06 55.8 95 33.7
QL10p011117 Quercus lobata HOM05D000023 ORTHO05D000014 3.6e-06 55.5 55 41.8
EL10Ac8g19642 Beta vulgaris HOM05D000023 ORTHO05D000014 4.7e-06 55.1 74 40.5
PSO541G5752 Papaver somniferum HOM05D000023 ORTHO05D000014 4.7e-06 55.1 74 33.8
PSO781G0087 Papaver somniferum HOM05D000023 ORTHO05D000014 4.7e-06 55.1 74 35.1
PSO782G2621 Papaver somniferum HOM05D000023 ORTHO05D000014 4.7e-06 55.1 82 30.5
Hund30522 Selenicereus undatus HOM05D000023 ORTHO05D000014 4.7e-06 55.1 95 32.6
arahy.Tifrunner.gnm1.ann1.WSWD4K Arachis hypogaea HOM05D000023 ORTHO05D000014 6.2e-06 54.7 117 29.9
CDE06G2340 Ceratophyllum demersum HOM05D000023 ORTHO05D000014 6.2e-06 54.7 100 34.0
PSO675G7933 Papaver somniferum HOM05D000023 ORTHO05D000014 6.2e-06 54.7 74 33.8
SHI07783 Sapria himalayana HOM05D000023 ORTHO05D000014 6.2e-06 54.7 60 43.3
Hund31325 Selenicereus undatus HOM05D000023 ORTHO05D000014 6.2e-06 54.7 95 32.6
FvH4_4g21491 Fragaria vesca HOM05D000023 ORTHO05D000014 8.1e-06 54.3 100 33.0
Sp5g19130 Schrenkiella parvula HOM05D000023 ORTHO05D000014 8.1e-06 54.3 90 32.2
Hund04191 Selenicereus undatus HOM05D000023 ORTHO05D000014 8.1e-06 54.3 95 31.6


User provided reference genes

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