Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv18116 Davidia involucrata HOM05D006205 ORTHO05D007703 1.6e-131 472.6 223 100.0
Dinv24098 Davidia involucrata HOM05D006205 ORTHO05D007703 1.0e-117 426.8 211 94.8
CSS0013544 Camellia sinensis var. sinensis HOM05D006205 ORTHO05D007703 6.7e-117 424.1 211 93.8
Gohir.A01G194800 Gossypium hirsutum HOM05D006205 ORTHO05D007703 1.5e-116 422.9 211 92.9
Gorai.002G228500 Gossypium raimondii HOM05D006205 ORTHO05D007703 3.3e-116 421.8 211 92.4
vmacro09103 Vaccinium macrocarpon HOM05D006205 ORTHO05D007703 7.4e-116 420.6 211 92.4
Duzib106G0917 Durio zibethinus HOM05D006205 ORTHO05D007703 2.8e-115 418.7 211 91.9
Gohir.D01G185000 Gossypium hirsutum HOM05D006205 ORTHO05D007703 2.8e-115 418.7 211 91.9
Hma1.2p1_1575F.1_g291620 Hydrangea macrophylla HOM05D006205 ORTHO05D007703 2.8e-115 418.7 211 91.5
Actinidia17259 Actinidia chinensis HOM05D006205 ORTHO05D007703 3.7e-115 418.3 211 92.4
Duzib093G1988 Durio zibethinus HOM05D006205 ORTHO05D007703 1.8e-114 416.0 211 91.0
Rhsim04G0098500 Rhododendron simsii HOM05D006205 ORTHO05D007703 5.3e-114 414.5 212 90.6
PGR142G1368 Punica granatum HOM05D006205 ORTHO05D007703 2.0e-113 412.5 211 89.6
Thecc.05G167100 Theobroma cacao HOM05D006205 ORTHO05D007703 2.6e-113 412.1 211 90.0
Ciclev10031918m.g Citrus clementina HOM05D006205 ORTHO05D007703 7.7e-113 410.6 211 90.0
Haze_19942 Corylus avellana HOM05D006205 ORTHO05D007703 1.3e-112 409.8 211 90.0
Cfa016888 Carpinus fangiana HOM05D006205 ORTHO05D007703 5.0e-112 407.9 211 90.0
Lju124A32T75 Lonicera japonica HOM05D006205 ORTHO05D007703 6.5e-112 407.5 211 89.1
Manes.09G031300 Manihot esculenta HOM05D006205 ORTHO05D007703 1.4e-111 406.4 211 87.2
CiPaw.09G032800 Carya illinoinensis HOM05D006205 ORTHO05D007703 1.9e-111 406.0 211 88.6
TAR623G1003 Trochodendron aralioides HOM05D006205 ORTHO05D007703 3.2e-111 405.2 211 89.1
Prupe.7G072500 Prunus persica HOM05D006205 ORTHO05D007703 3.6e-110 401.7 211 88.2
Eucgr.K01821 Eucalyptus grandis HOM05D006205 ORTHO05D007703 4.6e-110 401.4 211 87.2
TWI74G1063 Tripterygium wilfordii HOM05D006205 ORTHO05D007703 7.9e-110 400.6 211 86.7
Nitab4.5_0006846g0010 Nicotiana tabacum HOM05D006205 ORTHO05D007703 1.0e-109 400.2 211 86.3
Potri.006G058400 Populus trichocarpa HOM05D006205 ORTHO05D007703 1.0e-109 400.2 211 86.3
Hund19180 Selenicereus undatus HOM05D006205 ORTHO05D007703 1.0e-109 400.2 211 88.6
Sc25g0005160 Simmondsia chinensis HOM05D006205 ORTHO05D007703 1.0e-109 400.2 211 86.7
TPR.G4691 Trifolium pratense HOM05D006205 ORTHO05D007703 1.0e-109 400.2 211 86.7
arahy.Tifrunner.gnm1.ann1.68EW5P Arachis hypogaea HOM05D006205 ORTHO05D007703 1.8e-109 399.4 211 86.3
arahy.Tifrunner.gnm1.ann1.ARGW3J Arachis hypogaea HOM05D006205 ORTHO05D007703 1.8e-109 399.4 211 86.3
MSTRG.26097 Avicennia marina HOM05D006205 ORTHO05D007703 1.8e-109 399.4 211 86.7
Potri.016G049700 Populus trichocarpa HOM05D006205 ORTHO05D007703 2.3e-109 399.1 211 85.3
Cpa.g.sc85.111 Carica papaya HOM05D006205 ORTHO05D007703 3.9e-109 398.3 211 88.6
MELO3C009648.2 Cucumis melo HOM05D006205 ORTHO05D007703 3.9e-109 398.3 211 87.2
CAN.G85.9 Capsicum annuum HOM05D006205 ORTHO05D007703 5.1e-109 397.9 211 87.2
Ca_08497_v3 Cicer arietinum L. HOM05D006205 ORTHO05D007703 6.7e-109 397.5 211 85.8
Ca_29722_v3 Cicer arietinum L. HOM05D006205 ORTHO05D007703 6.7e-109 397.5 211 85.8
SGA_v2.0_scaffold94G28443 Striga asiatica HOM05D006205 ORTHO05D007703 1.1e-108 396.7 211 84.8
Glyma.19G144900 Glycine max HOM05D006205 ORTHO05D007703 1.5e-108 396.4 211 85.8
Nn2g15532 Nelumbo nucifera HOM05D006205 ORTHO05D007703 1.5e-108 396.4 209 89.0
PGSC0003DMG400012937 Solanum tuberosum HOM05D006205 ORTHO05D007703 3.3e-108 395.2 211 85.8
ClCG10G017350 Citrullus lanatus HOM05D006205 ORTHO05D007703 5.7e-108 394.4 222 83.8
Sabra06G0041700 Salix brachista HOM05D006205 ORTHO05D007703 5.7e-108 394.4 211 84.8
THA.LOC104809921 Tarenaya hassleriana HOM05D006205 ORTHO05D007703 5.7e-108 394.4 211 84.4
DCAR_013564 Daucus carota HOM05D006205 ORTHO05D007703 7.4e-108 394.0 211 85.3
Lsat_1_v5_gn_8_79241 Lactuca sativa HOM05D006205 ORTHO05D007703 9.7e-108 393.7 211 84.8
MD12G1062300 Malus domestica HOM05D006205 ORTHO05D007703 9.7e-108 393.7 210 85.7
Migut.K00057 Erythranthe guttata HOM05D006205 ORTHO05D007703 1.3e-107 393.3 211 86.3
Lalb_Chr18g0047621 Lupinus albus HOM05D006205 ORTHO05D007703 3.7e-107 391.7 211 84.4
EL10Ac3g06974 Beta vulgaris HOM05D006205 ORTHO05D007703 6.3e-107 391.0 211 86.3
FvH4_6g22800 Fragaria vesca HOM05D006205 ORTHO05D007703 6.3e-107 391.0 206 87.4
FAN14G5729 Fragaria x ananassa HOM05D006205 ORTHO05D007703 6.3e-107 391.0 206 87.4
Cc06_g16310 Coffea canephora HOM05D006205 ORTHO05D007703 8.2e-107 390.6 211 84.4
VMungo1383G0076 Vigna mungo HOM05D006205 ORTHO05D007703 8.2e-107 390.6 211 83.4
Sabra16G0053600 Salix brachista HOM05D006205 ORTHO05D007703 1.1e-106 390.2 211 82.5
FAN02G0014 Fragaria x ananassa HOM05D006205 ORTHO05D007703 2.4e-106 389.0 206 86.9
Medtr7g092680 Medicago truncatula HOM05D006205 ORTHO05D007703 3.1e-106 388.7 211 85.3
Psat3g069960 Pisum sativum HOM05D006205 ORTHO05D007703 3.1e-106 388.7 211 84.4
QL07p022686 Quercus lobata HOM05D006205 ORTHO05D007703 6.9e-106 387.5 211 85.3
Phvul.001G139800 Phaseolus vulgaris HOM05D006205 ORTHO05D007703 1.2e-105 386.7 211 82.9
Solyc03g064030.3 Solanum lycopersicum HOM05D006205 ORTHO05D007703 2.6e-105 385.6 211 84.4
RcHm_v2.0_Chr3g0480421 Rosa chinensis HOM05D006205 ORTHO05D007703 3.4e-105 385.2 206 86.4
CANSAT64G2514 Cannabis sativa HOM05D006205 ORTHO05D007703 5.9e-105 384.4 211 83.9
HanXRQChr05g0132791 Helianthus annuus HOM05D006205 ORTHO05D007703 5.9e-105 384.4 212 82.5
AUR62024356 Chenopodium quinoa HOM05D006205 ORTHO05D007703 7.7e-105 384.0 210 85.7
FAN05G5560 Fragaria x ananassa HOM05D006205 ORTHO05D007703 7.7e-105 384.0 206 85.9
Sed0025317 Sechium edule HOM05D006205 ORTHO05D007703 2.9e-104 382.1 211 84.4
Sopen03g017680 Solanum pennellii HOM05D006205 ORTHO05D007703 2.9e-104 382.1 211 83.4
ATR0605G163 Amborella trichopoda HOM05D006205 ORTHO05D007703 4.2e-103 378.3 211 80.1
Aqoxy1G00212 Aquilegia oxysepala HOM05D006205 ORTHO05D007703 4.7e-102 374.8 211 80.6
PSO384G4504 Papaver somniferum HOM05D006205 ORTHO05D007703 7.9e-102 374.0 211 79.6
AUR62025960 Chenopodium quinoa HOM05D006205 ORTHO05D007703 1.0e-101 373.6 219 80.8
Sp3g10390 Schrenkiella parvula HOM05D006205 ORTHO05D007703 2.3e-101 372.5 212 79.7
Zm00001eb236370 Zea mays HOM05D006205 ORTHO05D007703 2.3e-101 372.5 211 77.7
Lj1g0022121 Lotus japonicus HOM05D006205 ORTHO05D007703 3.9e-101 371.7 246 72.4
PSO339G0108 Papaver somniferum HOM05D006205 ORTHO05D007703 5.1e-101 371.3 211 79.6
CDE10G0043 Ceratophyllum demersum HOM05D006205 ORTHO05D007703 8.8e-101 370.5 211 80.1
AL3G23830 Arabidopsis lyrata HOM05D006205 ORTHO05D007703 2.0e-100 369.4 212 78.8
Thhalv10021002m.g Eutrema salsugineum HOM05D006205 ORTHO05D007703 2.6e-100 369.0 213 78.4
Carub.0003s1152 Capsella rubella HOM05D006205 ORTHO05D007703 3.3e-100 368.6 212 79.2
Os02g0195000 Oryza sativa ssp. japonica HOM05D006205 ORTHO05D007703 5.7e-100 367.9 211 75.8
BcaC05g29277 Brassica carinata HOM05D006205 ORTHO05D007703 9.7e-100 367.1 212 78.8
A05p37150 Brassica napus HOM05D006205 ORTHO05D007703 9.7e-100 367.1 212 78.8
C05p55580 Brassica napus HOM05D006205 ORTHO05D007703 9.7e-100 367.1 212 78.8
BolC5t34227H Brassica oleracea HOM05D006205 ORTHO05D007703 9.7e-100 367.1 212 78.8
BraA05t22513Z Brassica rapa HOM05D006205 ORTHO05D007703 9.7e-100 367.1 212 78.8
AT3G12150 Arabidopsis thaliana HOM05D006205 ORTHO05D007703 2.2e-99 365.9 212 77.8
QL93p2022_0017 Quercus lobata HOM05D006205 ORTHO05D007703 7.0e-98 360.9 269 66.9
Aa31LG3G6360 Aethionema arabicum HOM05D006205 ORTHO05D007703 2.6e-97 359.0 240 70.0
SalBow1G2518 Salvia bowleyana HOM05D006205 ORTHO05D007703 5.0e-96 354.8 253 68.8
BraA03t12906Z Brassica rapa HOM05D006205 ORTHO05D007703 1.9e-95 352.8 212 76.9
BcaC01g04062 Brassica carinata HOM05D006205 ORTHO05D007703 2.5e-95 352.4 208 78.4
C03p45470 Brassica napus HOM05D006205 ORTHO05D007703 2.5e-95 352.4 208 78.4
A03p37470 Brassica napus HOM05D006205 ORTHO05D007703 7.2e-95 350.9 212 76.4
BolC3t16816H Brassica oleracea HOM05D006205 ORTHO05D007703 7.2e-95 350.9 208 77.9
unitig_899.g15081 Utricularia gibba HOM05D006205 ORTHO05D007703 2.7e-94 349.0 211 77.7
SEGI_33856 Sequoiadendron giganteum HOM05D006205 ORTHO05D007703 2.0e-92 342.8 215 71.2
BcaB04g18694 Brassica carinata HOM05D006205 ORTHO05D007703 8.5e-88 327.4 188 78.7
GSVIVG01033369001 Vitis vinifera HOM05D006205 ORTHO05D007703 4.0e-85 318.5 166 89.2
SMO334G0020 Selaginella moellendorffii HOM05D006205 ORTHO05D007703 8.8e-85 317.4 215 68.4
Mapoly0096s0035 Marchantia polymorpha HOM05D006205 ORTHO05D007703 3.5e-81 305.4 215 65.1
Nitab4.5_0000016g0140 Nicotiana tabacum HOM05D006205 ORTHO05D007703 7.7e-81 304.3 211 69.2
ECA236G0538 Erigeron canadensis HOM05D006205 ORTHO05D007703 9.4e-79 297.4 166 83.1
Pp3c3_27370 Physcomitrium patens HOM05D006205 ORTHO05D007703 1.0e-77 293.9 215 62.3
AagrBONN_evm.TU.Sc2ySwM_228.3151 Anthoceros agrestis HOM05D006205 ORTHO05D007703 1.5e-76 290.0 215 65.1
MBI04_g47239_MAGBIO Magnolia biondii HOM05D006205 ORTHO05D007703 2.1e-70 269.6 152 78.9
Ah.13g076130 Amaranthus hybridus HOM05D006205 ORTHO05D007703 1.0e-69 267.3 175 73.7
CBR_g25855 Chara braunii HOM05D006205 ORTHO05D007703 2.2e-67 259.6 215 57.2
MBI04_g14269_MAGBIO Magnolia biondii HOM05D006205 ORTHO05D007703 3.0e-64 249.2 154 74.0
Actinidia33641 Actinidia chinensis HOM05D006205 ORTHO05D007703 1.4e-61 240.4 119 89.9
MD14G1062900 Malus domestica HOM05D006205 ORTHO05D007703 1.2e-57 227.3 126 81.7
SalBow1G2557 Salvia bowleyana HOM05D006205 ORTHO05D007703 6.0e-57 224.9 211 55.0
Peaxi162Scf00285g00443 Petunia axillaris HOM05D006205 ORTHO05D007703 1.3e-48 197.2 211 51.7
CsaV3_3G039050 Cucumis sativus L. HOM05D006205 ORTHO05D007703 1.5e-47 193.7 103 89.3
COL.COLO4_36119 Corchorus olitorius HOM05D006205 ORTHO05D007703 6.8e-45 184.9 94 93.6
HPP92_023778 Vanilla planifolia HOM05D006205 ORTHO05D007703 1.7e-43 180.3 94 89.4
arahy.Tifrunner.gnm1.ann1.EV0IJD Arachis hypogaea HOM05D006205 ORTHO05D007703 4.9e-35 152.1 115 69.6
Cre02.g076150 Chlamydomonas reinhardtii HOM05D006205 ORTHO05D007703 3.2e-34 149.4 278 35.6
MD14G1062700 Malus domestica HOM05D006205 ORTHO05D007703 1.6e-22 110.5 57 89.5
CARHR086730 Cardamine hirsuta HOM05D006205 ORTHO05D007703 1.1e-21 107.8 58 84.5
Medtr0001s0010 Medicago truncatula HOM05D006205 ORTHO05D007703 5.8e-20 102.1 79 67.1
VMungo1080G0431 Vigna mungo HOM05D006205 ORTHO05D007703 1.0e-16 91.3 58 77.6
Glyma.02G176400 Glycine max HOM05D006205 ORTHO05D007703 1.9e-15 87.0 51 70.6
Glyma.02G176500 Glycine max HOM05D006205 ORTHO05D007703 4.9e-11 72.4 40 80.0
BcaC01g04094 Brassica carinata HOM05D001227 ORTHO05D001082 1.5e-07 60.8 35 82.9
MCO07G325 Micromonas commoda HOM05D006205 ORTHO05D007703 4.3e-07 59.3 197 27.9


User provided reference genes

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