Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv18105 Davidia involucrata HOM05D008447 ORTHO05D010638 6.5e-293 1010.0 508 100.0
TAR369G0905 Trochodendron aralioides HOM05D008447 ORTHO05D010638 3.1e-218 761.9 508 74.8
Rhsim04G0099000 Rhododendron simsii HOM05D008447 ORTHO05D010638 3.0e-213 745.3 565 68.8
Cfa016881 Carpinus fangiana HOM05D008447 ORTHO05D010638 8.4e-208 727.2 502 72.3
GSVIVG01033352001 Vitis vinifera HOM05D008447 ORTHO05D010638 8.4e-208 727.2 463 77.3
Prupe.7G070400 Prunus persica HOM05D008447 ORTHO05D010638 2.1e-206 722.6 513 71.7
MD12G1063100 Malus domestica HOM05D008447 ORTHO05D010638 2.7e-206 722.2 511 71.2
Ciclev10004787m.g Citrus clementina HOM05D008447 ORTHO05D010638 1.0e-200 703.7 499 72.1
COL.COLO4_28736 Corchorus olitorius HOM05D008447 ORTHO05D010638 1.3e-197 693.3 509 69.0
Atru.chr1.942 Acer truncatum HOM05D008447 ORTHO05D010638 1.8e-194 682.9 490 70.4
Nn7g36103 Nelumbo nucifera HOM05D008447 ORTHO05D010638 4.5e-193 678.3 509 66.8
Migut.J01799 Erythranthe guttata HOM05D008447 ORTHO05D010638 5.0e-192 674.9 460 72.2
Thecc.05G165700 Theobroma cacao HOM05D008447 ORTHO05D010638 8.5e-192 674.1 510 67.6
Aqoxy1G00302 Aquilegia oxysepala HOM05D008447 ORTHO05D010638 6.7e-189 664.5 506 66.8
CANSAT80G0811 Cannabis sativa HOM05D008447 ORTHO05D010638 3.7e-187 658.7 508 65.9
CANSAT80G2072 Cannabis sativa HOM05D008447 ORTHO05D010638 1.4e-186 656.8 508 65.6
Gorai.002G037200 Gossypium raimondii HOM05D008447 ORTHO05D010638 1.2e-185 653.7 505 67.3
PGSC0003DMG400028389 Solanum tuberosum HOM05D008447 ORTHO05D010638 1.9e-183 646.4 484 67.6
Haze_19941 Corylus avellana HOM05D008447 ORTHO05D010638 9.4e-183 644.0 498 66.9
Sopen05g007620 Solanum pennellii HOM05D008447 ORTHO05D010638 3.0e-181 639.0 484 67.4
Solyc05g012800.1 Solanum lycopersicum HOM05D008447 ORTHO05D010638 1.1e-178 630.6 484 65.9
PGR004G0530 Punica granatum HOM05D008447 ORTHO05D010638 1.4e-178 630.2 476 67.0
PSO384G3680 Papaver somniferum HOM05D008447 ORTHO05D010638 3.1e-178 629.0 475 65.1
HPP92_023777 Vanilla planifolia HOM05D008447 ORTHO05D010638 3.2e-167 592.4 474 62.7
Cpa.g.sc85.118 Carica papaya HOM05D008447 ORTHO05D010638 4.2e-159 565.5 492 61.8
Gohir.D01G027950 Gossypium hirsutum HOM05D008447 ORTHO05D010638 4.7e-158 562.0 480 62.9
Nitab4.5_0008022g0020 Nicotiana tabacum HOM05D008447 ORTHO05D010638 8.0e-158 561.2 519 57.8
Peaxi162Scf00285g00227 Petunia axillaris HOM05D008447 ORTHO05D010638 3.0e-157 559.3 480 61.7
CSS0040904 Camellia sinensis var. sinensis HOM05D008447 ORTHO05D010638 1.3e-147 527.3 408 68.6
Nitab4.5_0000016g0020 Nicotiana tabacum HOM05D008447 ORTHO05D010638 6.3e-147 525.0 518 55.4
Gohir.D01G027900 Gossypium hirsutum HOM05D008447 ORTHO05D010638 1.3e-139 500.7 381 66.7
Actinidia17252 Actinidia chinensis HOM05D008447 ORTHO05D010638 2.9e-139 499.6 330 75.5
Gohir.A01G040200 Gossypium hirsutum HOM05D008447 ORTHO05D010638 4.1e-138 495.7 395 65.3
SMO367G0387 Selaginella moellendorffii HOM05D008447 ORTHO05D010638 7.0e-130 468.4 477 50.1
SMO275G0044 Selaginella moellendorffii HOM05D008447 ORTHO05D010638 1.6e-129 467.2 477 49.7
Hma1.2p1_0856F.1_g229060 Hydrangea macrophylla HOM05D008447 ORTHO05D010638 2.1e-129 466.8 295 80.3
Mapoly0099s0027 Marchantia polymorpha HOM05D008447 ORTHO05D010638 1.5e-127 460.7 483 49.7
Pp3c10_15450 Physcomitrium patens HOM05D008447 ORTHO05D010638 2.6e-124 449.9 473 49.3
MBI01_g36431_MAGBIO Magnolia biondii HOM05D008447 ORTHO05D010638 1.9e-119 433.7 384 60.4
AagrBONN_evm.TU.Sc2ySwM_228.434 Anthoceros agrestis HOM05D008447 ORTHO05D010638 2.1e-113 413.7 444 47.3
PRCOL_00000676 Prasinoderma coloniale HOM05D008447 ORTHO05D010638 2.7e-81 307.0 513 39.2
QL07p022609 Quercus lobata HOM05D008447 ORTHO05D010638 3.8e-67 260.0 182 69.2
QL07p022618 Quercus lobata HOM05D008447 ORTHO05D010638 9.4e-66 255.4 675 31.0
RcHm_v2.0_Chr3g0480711 Rosa chinensis HOM05D008447 ORTHO05D010638 3.0e-56 223.8 158 68.4
CBR_g675 Chara braunii HOM05D008447 ORTHO05D010638 1.7e-46 191.4 224 43.3
RcHm_v2.0_Chr3g0480721 Rosa chinensis HOM05D008447 ORTHO05D010638 9.8e-39 165.6 127 72.4
Actinidia17253 Actinidia chinensis HOM05D008447 ORTHO05D010638 1.4e-37 161.8 96 80.2
Haze_19939 Corylus avellana HOM05D008447 ORTHO05D010638 3.1e-24 117.5 77 72.7
CSS0021541 Camellia sinensis var. sinensis HOM05D008447 ORTHO05D010638 4.9e-22 110.2 67 77.6
SEGI_40265 Sequoiadendron giganteum HOM05D008447 ORTHO05D010638 7.3e-18 96.3 100 43.0
SEGI_28051 Sequoiadendron giganteum HOM05D008447 ORTHO05D010638 2.6e-15 87.8 87 56.3
MBI08_g35877_MAGBIO Magnolia biondii HOM05D008447 ORTHO05D010638 3.4e-15 87.4 64 67.2
CBR_g669 Chara braunii HOM05D000019 ORTHO05D000048 1.6e-09 68.6 84 47.6
CBR_g671 Chara braunii HOM05D008447 ORTHO05D010638 1.4e-08 65.5 62 48.4
SEGI_06266 Sequoiadendron giganteum HOM05D008447 ORTHO05D384438 6.8e-08 63.2 47 66.0
AagrBONN_evm.TU.Sc2ySwM_228.1600 Anthoceros agrestis HOM05D005554 ORTHO05D007823 2.2e-06 58.2 264 24.2
MBI18_g45367_MAGBIO Magnolia biondii HOM05D005554 ORTHO05D007823 6.4e-06 56.6 252 24.6


User provided reference genes

Program Settings