Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv17853 Davidia involucrata HOM05D006759 ORTHO05D008633 4.2e-175 617.8 299 100.0
Rhsim02G0115500 Rhododendron simsii HOM05D006759 ORTHO05D008633 1.6e-145 519.6 272 91.5
CSS0000245 Camellia sinensis var. sinensis HOM05D006759 ORTHO05D008633 3.5e-145 518.5 282 89.0
CSS0002106 Camellia sinensis var. sinensis HOM05D006759 ORTHO05D008633 1.3e-144 516.5 282 88.7
vmacro15843 Vaccinium macrocarpon HOM05D006759 ORTHO05D008633 9.5e-143 510.4 272 89.3
MSTRG.15955 Avicennia marina HOM05D006759 ORTHO05D008633 1.5e-140 503.1 283 84.8
QL05p077196 Quercus lobata HOM05D006759 ORTHO05D008633 1.5e-140 503.1 272 87.1
QL93p0073_1304 Quercus lobata HOM05D006759 ORTHO05D008633 5.8e-140 501.1 272 86.8
Cfa016405 Carpinus fangiana HOM05D006759 ORTHO05D008633 1.7e-139 499.6 272 87.5
Haze_06682 Corylus avellana HOM05D006759 ORTHO05D008633 2.4e-138 495.7 272 87.1
CANSAT56G4156 Cannabis sativa HOM05D006759 ORTHO05D008633 4.1e-138 495.0 272 83.8
CiPaw.09G080000 Carya illinoinensis HOM05D006759 ORTHO05D008633 7.1e-138 494.2 272 85.7
Prupe.4G029700 Prunus persica HOM05D006759 ORTHO05D008633 1.6e-137 493.0 271 86.7
MD10G1311200 Malus domestica HOM05D006759 ORTHO05D008633 1.3e-136 490.0 272 87.5
Gohir.A10G017000 Gossypium hirsutum HOM05D006759 ORTHO05D008633 3.9e-136 488.4 277 81.9
PGR004G2806 Punica granatum HOM05D006759 ORTHO05D008633 5.1e-136 488.0 272 84.9
Gorai.011G019000 Gossypium raimondii HOM05D006759 ORTHO05D008633 6.6e-136 487.6 277 81.6
Nn1g03732 Nelumbo nucifera HOM05D006759 ORTHO05D008633 8.6e-136 487.3 273 85.0
SalBow8G2756 Salvia bowleyana HOM05D006759 ORTHO05D008633 8.6e-136 487.3 291 79.0
SGA_v2.0_scaffold7G03895 Striga asiatica HOM05D006759 ORTHO05D008633 8.6e-136 487.3 282 81.6
Cc02_g11810 Coffea canephora HOM05D006759 ORTHO05D008633 2.5e-135 485.7 289 81.0
Migut.M01261 Erythranthe guttata HOM05D006759 ORTHO05D008633 7.3e-135 484.2 282 81.6
TWI38G2336 Tripterygium wilfordii HOM05D006759 ORTHO05D008633 9.5e-135 483.8 272 83.1
MELO3C002513.2 Cucumis melo HOM05D006759 ORTHO05D008633 2.1e-134 482.6 272 83.1
CsaV3_1G011360 Cucumis sativus L. HOM05D006759 ORTHO05D008633 2.8e-134 482.3 272 83.1
Gohir.D10G017100 Gossypium hirsutum HOM05D006759 ORTHO05D008633 2.8e-134 482.3 277 80.9
TAR626G1069 Trochodendron aralioides HOM05D006759 ORTHO05D008633 4.7e-134 481.5 272 83.8
Peaxi162Scf00082g01114 Petunia axillaris HOM05D006759 ORTHO05D008633 1.1e-133 480.3 280 80.0
Oeu058167.4 Olea europaea HOM05D006759 ORTHO05D008633 1.8e-133 479.6 296 79.1
Duzib160G0398 Durio zibethinus HOM05D006759 ORTHO05D008633 2.4e-133 479.2 279 82.4
ClCG03G005150 Citrullus lanatus HOM05D006759 ORTHO05D008633 8.9e-133 477.2 286 79.4
Eucgr.D00856 Eucalyptus grandis HOM05D006759 ORTHO05D008633 1.2e-132 476.9 272 82.4
Nitab4.5_0006475g0040 Nicotiana tabacum HOM05D006759 ORTHO05D008633 2.6e-132 475.7 273 81.7
Potri.011G031600 Populus trichocarpa HOM05D006759 ORTHO05D008633 3.4e-132 475.3 265 83.4
Lalb_Chr05g0218011 Lupinus albus HOM05D006759 ORTHO05D008633 4.4e-132 474.9 272 79.4
FvH4_3g02960 Fragaria vesca HOM05D006759 ORTHO05D008633 1.7e-131 473.0 272 83.8
Manes.16G016600 Manihot esculenta HOM05D006759 ORTHO05D008633 1.7e-131 473.0 269 82.9
Thecc.06G208000 Theobroma cacao HOM05D006759 ORTHO05D008633 2.9e-131 472.2 279 80.6
COL.COLO4_31683 Corchorus olitorius HOM05D006759 ORTHO05D008633 3.8e-131 471.9 288 78.8
RcHm_v2.0_Chr5g0004601 Rosa chinensis HOM05D006759 ORTHO05D008633 3.8e-131 471.9 272 83.1
Nitab4.5_0002345g0080 Nicotiana tabacum HOM05D006759 ORTHO05D008633 4.9e-131 471.5 273 81.0
Sabra11G0019100 Salix brachista HOM05D006759 ORTHO05D008633 4.9e-131 471.5 265 83.0
Cpa.g.sc81.5 Carica papaya HOM05D006759 ORTHO05D008633 1.9e-130 469.5 279 81.0
Atru.chr10.2043 Acer truncatum HOM05D006759 ORTHO05D008633 2.4e-130 469.2 269 81.8
Sabra11G0024900 Salix brachista HOM05D006759 ORTHO05D008633 2.4e-130 469.2 265 83.4
CAN.G424.100 Capsicum annuum HOM05D006759 ORTHO05D008633 4.1e-130 468.4 272 79.4
FAN21G1217 Fragaria x ananassa HOM05D006759 ORTHO05D008633 4.1e-130 468.4 272 83.1
FAN21G3610 Fragaria x ananassa HOM05D006759 ORTHO05D008633 4.1e-130 468.4 272 83.1
FAN25G0528 Fragaria x ananassa HOM05D006759 ORTHO05D008633 7.1e-130 467.6 272 82.7
Sc05g0008410 Simmondsia chinensis HOM05D006759 ORTHO05D008633 9.2e-130 467.2 272 79.8
Lj4g0006967 Lotus japonicus HOM05D006759 ORTHO05D008633 2.1e-129 466.1 272 78.3
Medtr4g092110 Medicago truncatula HOM05D006759 ORTHO05D008633 1.7e-128 463.0 272 78.3
THA.LOC104812582 Tarenaya hassleriana HOM05D006759 ORTHO05D008633 3.0e-128 462.2 282 79.1
HanXRQChr05g0130811 Helianthus annuus HOM05D006759 ORTHO05D008633 3.9e-128 461.8 273 80.2
PGSC0003DMG400021726 Solanum tuberosum HOM05D006759 ORTHO05D008633 5.1e-128 461.5 272 78.7
PSO170G0831 Papaver somniferum HOM05D006759 ORTHO05D008633 6.6e-128 461.1 275 78.9
AL7G32800 Arabidopsis lyrata HOM05D006759 ORTHO05D008633 1.1e-127 460.3 271 80.1
Ciclev10016144m.g Citrus clementina HOM05D006759 ORTHO05D008633 1.1e-127 460.3 270 81.1
AT4G21320 Arabidopsis thaliana HOM05D006759 ORTHO05D008633 2.5e-127 459.1 271 80.1
Ca_18449_v3 Cicer arietinum L. HOM05D006759 ORTHO05D008633 5.6e-127 458.0 272 77.2
Lsat_1_v5_gn_7_18360 Lactuca sativa HOM05D006759 ORTHO05D008633 5.6e-127 458.0 273 79.1
Carub.0007s2012 Capsella rubella HOM05D006759 ORTHO05D008633 7.3e-127 457.6 281 78.6
CARHR227890 Cardamine hirsuta HOM05D006759 ORTHO05D008633 1.2e-126 456.8 281 77.6
Psat7g105480 Pisum sativum HOM05D006759 ORTHO05D008633 1.2e-126 456.8 272 77.6
Aa31LG6G3340 Aethionema arabicum HOM05D006759 ORTHO05D008633 2.8e-126 455.7 271 80.1
Sopen02g024680 Solanum pennellii HOM05D006759 ORTHO05D008633 3.6e-126 455.3 272 78.3
A03p52720 Brassica napus HOM05D006759 ORTHO05D008633 4.7e-126 454.9 270 79.6
BraA03t14346Z Brassica rapa HOM05D006759 ORTHO05D008633 2.4e-125 452.6 272 78.3
Glyma.08G062300 Glycine max HOM05D006759 ORTHO05D008633 3.1e-125 452.2 272 76.8
DCAR_028150 Daucus carota HOM05D006759 ORTHO05D008633 4.0e-125 451.8 271 77.5
MBI02_g02472_MAGBIO Magnolia biondii HOM05D006759 ORTHO05D008633 5.2e-125 451.4 322 69.6
arahy.Tifrunner.gnm1.ann1.13LU1X Arachis hypogaea HOM05D006759 ORTHO05D008633 6.9e-125 451.1 273 77.7
arahy.Tifrunner.gnm1.ann1.6345FV Arachis hypogaea HOM05D006759 ORTHO05D008633 6.9e-125 451.1 273 77.7
BolC7t45615H Brassica oleracea HOM05D006759 ORTHO05D008633 9.0e-125 450.7 270 78.1
Thhalv10025914m.g Eutrema salsugineum HOM05D006759 ORTHO05D008633 1.5e-124 449.9 269 78.4
Solyc02g079930.3 Solanum lycopersicum HOM05D006759 ORTHO05D008633 1.5e-124 449.9 272 77.6
ECA236G1815 Erigeron canadensis HOM05D006759 ORTHO05D008633 2.6e-124 449.1 270 79.3
BcaNung00862 Brassica carinata HOM05D006759 ORTHO05D008633 4.4e-124 448.4 269 78.1
C07p51160 Brassica napus HOM05D006759 ORTHO05D008633 4.4e-124 448.4 269 78.1
Sp7g19390 Schrenkiella parvula HOM05D006759 ORTHO05D008633 1.4e-122 443.4 272 76.8
BcaC06g30660 Brassica carinata HOM05D006759 ORTHO05D008633 3.2e-122 442.2 270 77.8
ATR0073G021 Amborella trichopoda HOM05D006759 ORTHO05D008633 7.8e-121 437.6 268 75.0
Ah.14g088500 Amaranthus hybridus HOM05D006759 ORTHO05D008633 1.0e-120 437.2 271 73.4
unitig_37.g12139 Utricularia gibba HOM05D006759 ORTHO05D008633 2.3e-120 436.0 272 74.3
TPR.G13912 Trifolium pratense HOM05D006759 ORTHO05D008633 3.0e-120 435.6 273 74.4
CDE05G1382 Ceratophyllum demersum HOM05D006759 ORTHO05D008633 5.1e-120 434.9 278 71.9
AUR62014623 Chenopodium quinoa HOM05D006759 ORTHO05D008633 5.1e-120 434.9 271 71.2
AUR62012578 Chenopodium quinoa HOM05D006759 ORTHO05D008633 1.6e-118 429.9 271 70.8
Hund21315 Selenicereus undatus HOM05D006759 ORTHO05D008633 6.9e-117 424.5 262 73.7
EL10As6g23697 Beta vulgaris HOM05D006759 ORTHO05D008633 2.0e-116 422.9 271 72.0
Os06g0682900 Oryza sativa ssp. japonica HOM05D006759 ORTHO05D008633 2.7e-113 412.5 267 72.3
Lj1C1222T1 Lonicera japonica HOM05D006759 ORTHO05D008633 1.6e-110 403.3 239 82.0
Sed0013464 Sechium edule HOM05D006759 ORTHO05D008633 2.8e-110 402.5 234 80.8
Zm00001eb225360 Zea mays HOM05D006759 ORTHO05D008633 2.8e-110 402.5 263 71.9
Phvul.002G218300 Phaseolus vulgaris HOM05D006759 ORTHO05D008633 1.5e-108 396.7 274 68.2
HPP92_027153 Vanilla planifolia HOM05D006759 ORTHO05D008633 1.2e-105 387.1 252 73.8
VMungo0251G0437 Vigna mungo HOM05D006759 ORTHO05D008633 2.3e-104 382.9 274 66.1
GSVIVG01004352001 Vitis vinifera HOM05D006759 ORTHO05D008633 1.1e-98 364.0 208 84.1
Actinidia36908 Actinidia chinensis HOM05D006759 ORTHO05D008633 1.7e-91 340.1 177 91.0
SEGI_30514 Sequoiadendron giganteum HOM05D006759 ORTHO05D008633 9.4e-90 334.3 269 59.5
AagrBONN_evm.TU.Sc2ySwM_117.529 Anthoceros agrestis HOM05D006759 ORTHO05D008633 1.2e-76 290.8 260 50.4
Mapoly0122s0010 Marchantia polymorpha HOM05D006759 ORTHO05D008633 1.2e-73 280.8 259 51.0
Pp3c22_820 Physcomitrium patens HOM05D006759 ORTHO05D008633 1.4e-69 267.3 253 49.4
Pp3c18_19780 Physcomitrium patens HOM05D006759 ORTHO05D008633 4.1e-69 265.8 259 48.3
Nn2g12529 Nelumbo nucifera HOM05D006759 ORTHO05D008633 2.2e-59 233.4 152 75.0
CANSAT21G1109 Cannabis sativa HOM05D006759 ORTHO05D008633 2.8e-46 189.9 105 81.9
SMO327G0040 Selaginella moellendorffii HOM05D006759 ORTHO05D008633 5.4e-45 185.7 253 39.1
Potri.004G031100 Populus trichocarpa HOM05D006759 ORTHO05D008633 2.0e-44 183.7 194 51.0
GSVIVG01002901001 Vitis vinifera HOM05D006759 ORTHO05D008633 1.0e-43 181.4 106 84.9
RcHm_v2.0_Chr5g0004571 Rosa chinensis HOM05D006759 ORTHO05D008633 5.6e-42 175.6 163 60.1
Hund21313 Selenicereus undatus HOM05D006759 ORTHO05D008633 3.4e-39 166.4 289 39.4
Nn7g36203 Nelumbo nucifera HOM05D006759 ORTHO05D008633 1.9e-37 160.6 95 78.9
Glyma.07G186901 Glycine max HOM05D006759 ORTHO05D008633 3.0e-35 153.3 94 74.5
Aqoxy1G03825 Aquilegia oxysepala HOM05D006759 ORTHO05D008633 2.4e-29 133.7 75 81.3
COL.COLO4_11824 Corchorus olitorius HOM05D000068 ORTHO05D000084 1.4e-24 117.9 67 85.1
COL.COLO4_37489 Corchorus olitorius HOM05D006759 ORTHO05D161314 2.3e-24 117.1 73 76.7
GSVIVG01004471001 Vitis vinifera HOM05D006759 ORTHO05D008633 2.3e-24 117.1 72 80.6
Hund21314 Selenicereus undatus HOM05D006759 ORTHO05D381616 1.9e-13 80.9 41 82.9
Nn1g06940 Nelumbo nucifera HOM05D006759 ORTHO05D008633 4.0e-08 63.2 48 68.8


User provided reference genes

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