Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv17816 Davidia involucrata HOM05D005739 ORTHO05D007740 2.5e-161 572.0 282 100.0
Dinv13869 Davidia involucrata HOM05D005739 ORTHO05D007740 8.1e-152 540.4 274 97.4
Dinv20033 Davidia involucrata HOM05D005739 ORTHO05D007740 4.0e-127 458.4 310 77.4
Hma1.2p1_0813F.1_g222580 Hydrangea macrophylla HOM05D005739 ORTHO05D007740 3.4e-126 455.3 274 81.4
Atru.chr10.2176 Acer truncatum HOM05D005739 ORTHO05D007740 2.5e-124 449.1 274 81.0
Ciclev10015698m.g Citrus clementina HOM05D005739 ORTHO05D007740 1.9e-121 439.5 274 78.1
Prupe.4G024100 Prunus persica HOM05D005739 ORTHO05D007740 3.3e-121 438.7 273 77.7
Haze_06773 Corylus avellana HOM05D005739 ORTHO05D007740 1.3e-120 436.8 282 76.2
CSS0045804 Camellia sinensis var. sinensis HOM05D005739 ORTHO05D007740 4.8e-120 434.9 274 78.8
Potri.011G000100 Populus trichocarpa HOM05D005739 ORTHO05D007740 6.3e-120 434.5 274 77.4
Sabra11G0000600 Salix brachista HOM05D005739 ORTHO05D007740 8.2e-120 434.1 274 78.5
Actinidia11847 Actinidia chinensis HOM05D005739 ORTHO05D007740 1.1e-119 433.7 274 78.1
TWI38G1065 Tripterygium wilfordii HOM05D005739 ORTHO05D007740 5.3e-119 431.4 274 76.6
Cfa000251 Carpinus fangiana HOM05D005739 ORTHO05D007740 2.0e-118 429.5 282 75.2
RcHm_v2.0_Chr5g0003721 Rosa chinensis HOM05D005739 ORTHO05D007740 1.3e-117 426.8 274 76.3
GSVIVG01012654001 Vitis vinifera HOM05D005739 ORTHO05D007740 6.5e-117 424.5 274 76.3
Lj1C1227G9 Lonicera japonica HOM05D005739 ORTHO05D007740 8.5e-117 424.1 269 79.6
Rhsim02G0110500 Rhododendron simsii HOM05D005739 ORTHO05D007740 1.9e-116 422.9 275 76.0
QL05p074082 Quercus lobata HOM05D005739 ORTHO05D007740 5.5e-116 421.4 282 73.8
MD10G1317700 Malus domestica HOM05D005739 ORTHO05D007740 7.2e-116 421.0 274 75.9
CiPaw.10G069300 Carya illinoinensis HOM05D005739 ORTHO05D007740 1.2e-115 420.2 282 73.4
Nn1g03584 Nelumbo nucifera HOM05D005739 ORTHO05D007740 1.6e-115 419.9 274 75.9
Thecc.06G217300 Theobroma cacao HOM05D005739 ORTHO05D007740 3.6e-115 418.7 274 75.9
Duzib235G0413 Durio zibethinus HOM05D005739 ORTHO05D007740 3.0e-114 415.6 274 75.2
COL.COLO4_31742 Corchorus olitorius HOM05D005739 ORTHO05D007740 3.9e-114 415.2 274 76.3
TAR627G1089 Trochodendron aralioides HOM05D005739 ORTHO05D007740 5.1e-114 414.8 275 74.5
Sc06g0010750 Simmondsia chinensis HOM05D005739 ORTHO05D007740 1.1e-113 413.7 275 74.5
Gorai.010G179000 Gossypium raimondii HOM05D005739 ORTHO05D007740 1.5e-113 413.3 274 74.8
Gohir.D06G153000 Gossypium hirsutum HOM05D005739 ORTHO05D007740 2.0e-113 412.9 274 74.8
EL10Ac8g20019 Beta vulgaris HOM05D005739 ORTHO05D007740 4.3e-113 411.8 274 74.1
CANSAT56G1696 Cannabis sativa HOM05D005739 ORTHO05D007740 4.3e-113 411.8 276 74.6
AUR62012674 Chenopodium quinoa HOM05D005739 ORTHO05D007740 5.7e-113 411.4 265 77.4
vmacro15817 Vaccinium macrocarpon HOM05D005739 ORTHO05D007740 2.8e-112 409.1 275 73.8
FvH4_3g02490 Fragaria vesca HOM05D005739 ORTHO05D007740 3.7e-112 408.7 274 72.6
Lsat_1_v5_gn_4_60101 Lactuca sativa HOM05D005739 ORTHO05D007740 4.8e-112 408.3 274 73.7
PGSC0003DMG400011257 Solanum tuberosum HOM05D005739 ORTHO05D007740 8.2e-112 407.5 277 73.6
AL6G48370 Arabidopsis lyrata HOM05D005739 ORTHO05D007740 1.1e-111 407.1 274 75.2
A09p26050 Brassica napus HOM05D005739 ORTHO05D007740 5.3e-111 404.8 274 73.7
Carub.0006s3279 Capsella rubella HOM05D005739 ORTHO05D007740 6.9e-111 404.4 274 73.0
Psat4g007680 Pisum sativum HOM05D005739 ORTHO05D007740 2.0e-110 402.9 277 71.8
Migut.M01296 Erythranthe guttata HOM05D005739 ORTHO05D007740 3.4e-110 402.1 275 73.5
AT4G04880 Arabidopsis thaliana HOM05D005739 ORTHO05D007740 5.9e-110 401.4 274 74.1
Ca_21095_v3 Cicer arietinum L. HOM05D005739 ORTHO05D007740 5.9e-110 401.4 278 73.4
Ca_30203_v3 Cicer arietinum L. HOM05D005739 ORTHO05D007740 5.9e-110 401.4 278 73.4
Glyma.07G258900 Glycine max HOM05D005739 ORTHO05D007740 5.9e-110 401.4 285 70.2
BraA09t38171Z Brassica rapa HOM05D005739 ORTHO05D007740 7.7e-110 401.0 274 73.7
TPR.G37091 Trifolium pratense HOM05D005739 ORTHO05D007740 7.7e-110 401.0 277 73.3
Solyc10g005310.3 Solanum lycopersicum HOM05D005739 ORTHO05D007740 1.0e-109 400.6 277 71.8
SalBow8G1417 Salvia bowleyana HOM05D005739 ORTHO05D007740 1.3e-109 400.2 274 72.3
AUR62021982 Chenopodium quinoa HOM05D005739 ORTHO05D007740 1.7e-109 399.8 296 70.3
Cc09_g01940 Coffea canephora HOM05D005739 ORTHO05D007740 2.2e-109 399.4 268 75.0
Nitab4.5_0007448g0040 Nicotiana tabacum HOM05D005739 ORTHO05D007740 2.2e-109 399.4 277 71.8
arahy.Tifrunner.gnm1.ann1.HAY2RB Arachis hypogaea HOM05D005739 ORTHO05D007740 3.8e-109 398.7 287 70.7
DCAR_008137 Daucus carota HOM05D005739 ORTHO05D007740 3.8e-109 398.7 274 71.2
BcaC04g21334 Brassica carinata HOM05D005739 ORTHO05D007740 6.5e-109 397.9 274 72.3
C09p33050 Brassica napus HOM05D005739 ORTHO05D007740 6.5e-109 397.9 274 72.3
Thhalv10028765m.g Eutrema salsugineum HOM05D005739 ORTHO05D007740 6.5e-109 397.9 275 73.8
MSTRG.15974 Avicennia marina HOM05D005739 ORTHO05D007740 8.5e-109 397.5 274 71.2
BolC9t56140H Brassica oleracea HOM05D005739 ORTHO05D007740 8.5e-109 397.5 274 72.3
CsaV3_6G049150 Cucumis sativus L. HOM05D005739 ORTHO05D007740 8.5e-109 397.5 274 69.7
FAN25G0806 Fragaria x ananassa HOM05D005739 ORTHO05D007740 8.5e-109 397.5 274 71.2
HanXRQChr16g0515931 Helianthus annuus HOM05D005739 ORTHO05D007740 1.1e-108 397.1 274 71.2
Nitab4.5_0002155g0060 Nicotiana tabacum HOM05D005739 ORTHO05D007740 1.4e-108 396.7 274 72.3
arahy.Tifrunner.gnm1.ann1.GPHX1M Arachis hypogaea HOM05D005739 ORTHO05D007740 2.5e-108 396.0 284 70.4
CARHR252690 Cardamine hirsuta HOM05D005739 ORTHO05D007740 2.5e-108 396.0 274 73.0
VMungo1215G0361 Vigna mungo HOM05D005739 ORTHO05D007740 2.5e-108 396.0 287 69.7
Phvul.003G077000 Phaseolus vulgaris HOM05D005739 ORTHO05D007740 3.2e-108 395.6 285 69.1
PGR004G1404 Punica granatum HOM05D005739 ORTHO05D007740 5.5e-108 394.8 274 70.8
MELO3C007380.2 Cucumis melo HOM05D005739 ORTHO05D007740 1.2e-107 393.7 274 69.3
Peaxi162Scf00203g01110 Petunia axillaris HOM05D005739 ORTHO05D007740 1.2e-107 393.7 272 73.2
Eucgr.D01304 Eucalyptus grandis HOM05D005739 ORTHO05D007740 3.6e-107 392.1 274 69.3
Sp6g04100 Schrenkiella parvula HOM05D005739 ORTHO05D007740 1.0e-106 390.6 274 71.9
Sed0020639 Sechium edule HOM05D005739 ORTHO05D007740 1.4e-106 390.2 266 71.4
PSO832G4144 Papaver somniferum HOM05D005739 ORTHO05D007740 2.3e-106 389.4 275 69.5
SGA_v2.0_scaffold4G01929 Striga asiatica HOM05D005739 ORTHO05D007740 5.1e-106 388.3 276 71.4
Glyma.15G106200 Glycine max HOM05D005739 ORTHO05D007740 1.5e-105 386.7 271 71.6
Lj6g0027190 Lotus japonicus HOM05D005739 ORTHO05D007740 2.6e-105 386.0 268 74.3
Ah.14g088100 Amaranthus hybridus HOM05D005739 ORTHO05D007740 3.3e-105 385.6 316 63.3
PSO210G3635 Papaver somniferum HOM05D005739 ORTHO05D007740 3.3e-105 385.6 275 69.1
Oeu063902.1 Olea europaea HOM05D005739 ORTHO05D007740 7.4e-105 384.4 274 70.8
Cpa.g.sc198.24 Carica papaya HOM05D005739 ORTHO05D007740 9.7e-105 384.0 251 77.7
ECA234G0122 Erigeron canadensis HOM05D005739 ORTHO05D007740 9.7e-105 384.0 275 69.5
BcaB01g01842 Brassica carinata HOM05D005739 ORTHO05D007740 2.2e-104 382.9 274 70.1
Aa31LG9G9620 Aethionema arabicum HOM05D005739 ORTHO05D007740 4.8e-104 381.7 274 70.1
Glyma.13G206500 Glycine max HOM05D005739 ORTHO05D007740 1.4e-103 380.2 271 70.1
VMungo0540G2038 Vigna mungo HOM05D005739 ORTHO05D007740 1.2e-102 377.1 275 70.9
TPR.G7643 Trifolium pratense HOM05D005739 ORTHO05D007740 5.9e-102 374.8 275 70.5
Sed0022137 Sechium edule HOM05D005739 ORTHO05D007740 1.0e-101 374.0 276 67.0
Lalb_Chr20g0118561 Lupinus albus HOM05D005739 ORTHO05D007740 1.3e-101 373.6 278 71.6
Phvul.006G151100 Phaseolus vulgaris HOM05D005739 ORTHO05D007740 3.8e-101 372.1 275 69.8
Ca_00625_v3 Cicer arietinum L. HOM05D005739 ORTHO05D007740 1.5e-100 370.2 275 69.5
Gohir.A06G147200 Gossypium hirsutum HOM05D005739 ORTHO05D007740 2.5e-100 369.4 252 74.2
Psat1g181440 Pisum sativum HOM05D005739 ORTHO05D007740 2.5e-100 369.4 275 69.1
ClCG01G022090 Citrullus lanatus HOM05D005739 ORTHO05D007740 5.5e-100 368.2 274 67.9
THA.LOC104812968 Tarenaya hassleriana HOM05D005739 ORTHO05D007740 1.2e-99 367.1 249 74.7
ATR0752G010 Amborella trichopoda HOM05D005739 ORTHO05D007740 1.6e-99 366.7 266 67.7
Medtr2g022780 Medicago truncatula HOM05D005739 ORTHO05D007740 2.7e-99 365.9 275 69.8
CDE11G0579 Ceratophyllum demersum HOM05D005739 ORTHO05D007740 1.4e-98 363.6 281 64.1
Zm00001eb110820 Zea mays HOM05D005739 ORTHO05D007740 2.8e-96 355.9 265 65.7
HPP92_016316 Vanilla planifolia HOM05D005739 ORTHO05D007740 4.8e-96 355.1 267 67.0
SEGI_12484 Sequoiadendron giganteum HOM05D005739 ORTHO05D007740 1.1e-95 354.0 265 64.9
Manes.16G010200 Manihot esculenta HOM05D005739 ORTHO05D007740 1.6e-94 350.1 225 78.7
Os07g0661000 Oryza sativa ssp. japonica HOM05D005739 ORTHO05D007740 5.9e-94 348.2 265 64.5
Aqoxy1G03635 Aquilegia oxysepala HOM05D005739 ORTHO05D007740 2.5e-92 342.8 267 63.3
Medtr4g131840 Medicago truncatula HOM05D005739 ORTHO05D007740 9.4e-92 340.9 252 70.2
Hund23487 Selenicereus undatus HOM05D005739 ORTHO05D007740 3.6e-91 339.0 266 66.9
MBI18_g35070_MAGBIO Magnolia biondii HOM05D005739 ORTHO05D007740 1.0e-85 320.9 228 70.2
HPP92_016297 Vanilla planifolia HOM05D005739 ORTHO05D007740 2.7e-78 296.2 229 66.4
SMO343G0036 Selaginella moellendorffii HOM05D005739 ORTHO05D007740 8.6e-77 291.2 263 57.8
unitig_92.g28118 Utricularia gibba HOM05D005739 ORTHO05D007740 1.8e-74 283.5 224 66.1
Mapoly0023s0135 Marchantia polymorpha HOM05D005739 ORTHO05D007740 1.8e-71 273.5 261 54.0
arahy.Tifrunner.gnm1.ann1.H0U1UD Arachis hypogaea HOM05D005739 ORTHO05D007740 4.1e-63 245.7 275 52.4
AagrBONN_evm.TU.Sc2ySwM_368.535 Anthoceros agrestis HOM05D005739 ORTHO05D007740 6.6e-61 238.4 264 50.0
arahy.Tifrunner.gnm1.ann1.53BRPK Arachis hypogaea HOM05D005739 ORTHO05D007740 1.6e-59 233.8 175 70.9
CAN.G105.13 Capsicum annuum HOM05D005739 ORTHO05D007740 2.3e-58 229.9 178 65.7
Sopen10g001300 Solanum pennellii HOM05D005739 ORTHO05D007740 2.3e-58 229.9 171 68.4
Pp3c11_7970 Physcomitrium patens HOM05D005739 ORTHO05D007740 1.5e-57 227.3 217 53.9
arahy.Tifrunner.gnm1.ann1.FSQL8E Arachis hypogaea HOM05D005739 ORTHO05D007740 6.4e-56 221.9 245 54.3
arahy.Tifrunner.gnm1.ann1.Q9UH73 Arachis hypogaea HOM05D005739 ORTHO05D007740 4.3e-52 209.1 269 45.4
arahy.Tifrunner.gnm1.ann1.KZ0328 Arachis hypogaea HOM05D005739 ORTHO05D007740 9.5e-52 208.0 240 52.9
arahy.Tifrunner.gnm1.ann1.7V36PE Arachis hypogaea HOM05D005739 ORTHO05D007740 2.8e-51 206.5 210 56.2
arahy.Tifrunner.gnm1.ann1.0E5R4V Arachis hypogaea HOM05D005739 ORTHO05D007740 7.6e-49 198.4 180 62.2
arahy.Tifrunner.gnm1.ann1.B9PES8 Arachis hypogaea HOM05D005739 ORTHO05D007740 6.4e-48 195.3 180 61.1
Cre03.g161000 Chlamydomonas reinhardtii HOM05D005739 ORTHO05D007740 4.6e-46 189.1 356 35.7
arahy.Tifrunner.gnm1.ann1.AD56MI Arachis hypogaea HOM05D005739 ORTHO05D083983 6.2e-43 178.7 244 47.5
MCO11G903 Micromonas commoda HOM05D005739 ORTHO05D007740 4.0e-42 176.0 276 39.9
arahy.Tifrunner.gnm1.ann1.39644B Arachis hypogaea HOM05D005739 ORTHO05D007740 2.4e-23 113.6 204 39.2
arahy.Tifrunner.gnm1.ann1.3ZZ8UM Arachis hypogaea HOM05D000187 ORTHO05D000230 8.4e-16 88.6 136 42.6
Nn1g07096 Nelumbo nucifera HOM05D005739 ORTHO05D007740 6.9e-10 68.9 83 47.0
arahy.Tifrunner.gnm1.ann1.ZUJ3H1 Arachis hypogaea HOM05D005739 ORTHO05D083715 2.9e-08 63.5 35 80.0


User provided reference genes

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