Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv17801 Davidia involucrata HOM05D000503 ORTHO05D000361 1.1e-43 179.5 89 100.0
Dinv18797 Davidia involucrata HOM05D000503 ORTHO05D000361 1.1e-43 179.5 89 100.0
Dinv18803 Davidia involucrata HOM05D000503 ORTHO05D000361 1.1e-43 179.5 89 100.0
Dinv05543 Davidia involucrata HOM05D000503 ORTHO05D000361 2.9e-23 111.7 58 94.8
Dinv24917 Davidia involucrata HOM05D000503 ORTHO05D000361 5.2e-20 100.9 58 82.8
COL.COLO4_36281 Corchorus olitorius HOM05D000359 ORTHO05D000251 5.0e-15 84.3 58 65.5
Prupe.1G261500 Prunus persica HOM05D000503 ORTHO05D000361 6.6e-15 84.0 58 65.5
Thecc.02G239500 Theobroma cacao HOM05D000503 ORTHO05D000361 1.1e-14 83.2 58 65.5
Lj6C799T13 Lonicera japonica HOM05D000503 ORTHO05D000361 4.2e-14 81.3 84 56.0
Duzib248G1177 Durio zibethinus HOM05D000503 ORTHO05D000361 5.5e-14 80.9 58 63.8
Duzib268G1551 Durio zibethinus HOM05D000503 ORTHO05D000361 2.1e-13 79.0 65 58.5
Dinv31126 Davidia involucrata HOM05D000503 ORTHO05D000361 8.0e-13 77.0 52 73.1
Gohir.D04G138500 Gossypium hirsutum HOM05D000503 ORTHO05D000361 1.0e-12 76.6 58 60.3
Gorai.012G123500 Gossypium raimondii HOM05D000503 ORTHO05D000361 1.0e-12 76.6 58 60.3
FvH4_4g35230 Fragaria vesca HOM05D000503 ORTHO05D000361 3.0e-12 75.1 58 63.8
FAN12G2925 Fragaria x ananassa HOM05D000503 ORTHO05D000361 3.0e-12 75.1 58 63.8
FAN17G2710 Fragaria x ananassa HOM05D000503 ORTHO05D000361 3.0e-12 75.1 58 63.8
Manes.01G195100 Manihot esculenta HOM05D000503 ORTHO05D000361 4.0e-12 74.7 55 67.3
TAR629G2186 Trochodendron aralioides HOM05D000503 ORTHO05D000361 5.2e-12 74.3 58 62.1
RcHm_v2.0_Chr4g0444831 Rosa chinensis HOM05D000503 ORTHO05D000361 6.8e-12 73.9 58 62.1
Cpa.g.sc5.328 Carica papaya HOM05D000503 ORTHO05D000361 8.9e-12 73.6 59 59.3
MSTRG.7857 Avicennia marina HOM05D000503 ORTHO05D000361 1.2e-11 73.2 67 59.7
FAN22G1826 Fragaria x ananassa HOM05D000503 ORTHO05D000361 1.5e-11 72.8 58 62.1
TAR622G1210 Trochodendron aralioides HOM05D000503 ORTHO05D000361 2.0e-11 72.4 61 60.7
PGR102G2251 Punica granatum HOM05D000503 ORTHO05D000361 2.6e-11 72.0 58 60.3
Migut.L01384 Erythranthe guttata HOM05D000503 ORTHO05D000361 5.7e-11 70.9 63 60.3
MD13G1085200 Malus domestica HOM05D000503 ORTHO05D000361 5.7e-11 70.9 59 64.4
PGSC0003DMG402022640 Solanum tuberosum HOM05D000503 ORTHO05D000361 7.5e-11 70.5 61 59.0
Manes.05G092200 Manihot esculenta HOM05D000503 ORTHO05D000361 1.3e-10 69.7 58 63.8
SGA_v2.0_scaffold8G04266 Striga asiatica HOM05D000503 ORTHO05D000361 2.2e-10 68.9 60 61.7
VMungo0251G2265 Vigna mungo HOM05D000503 ORTHO05D000361 2.2e-10 68.9 58 56.9
Hma1.2p1_0265F.1_g106270 Hydrangea macrophylla HOM05D000503 ORTHO05D000361 2.8e-10 68.6 60 58.3
Nitab4.5_0009074g0010 Nicotiana tabacum HOM05D000503 ORTHO05D000361 3.7e-10 68.2 61 57.4
CSS0046733 Camellia sinensis var. sinensis HOM05D000503 ORTHO05D000361 4.9e-10 67.8 59 64.4
MD16G1084400 Malus domestica HOM05D000503 ORTHO05D000361 4.9e-10 67.8 59 61.0
Solyc05g006420.3 Solanum lycopersicum HOM05D000503 ORTHO05D000361 4.9e-10 67.8 61 57.4
Sopen05g002350 Solanum pennellii HOM05D000503 ORTHO05D000361 4.9e-10 67.8 61 57.4
FAN07G2024 Fragaria x ananassa HOM05D000503 ORTHO05D000361 6.3e-10 67.4 58 60.3
Sed0023476 Sechium edule HOM05D000503 ORTHO05D000361 6.3e-10 67.4 58 53.4
TAR374G0490 Trochodendron aralioides HOM05D000503 ORTHO05D000361 6.3e-10 67.4 61 55.7
Oeu015863.1 Olea europaea HOM05D000503 ORTHO05D000361 8.3e-10 67.0 62 59.7
Actinidia14996 Actinidia chinensis HOM05D000503 ORTHO05D000361 1.1e-09 66.6 60 63.3
Dinv18634 Davidia involucrata HOM05D000935 ORTHO05D010387 1.1e-09 66.6 64 59.4
Dinv26249 Davidia involucrata HOM05D000935 ORTHO05D010387 1.1e-09 66.6 64 59.4
Dinv42052 Davidia involucrata HOM05D001173 ORTHO05D010387 1.1e-09 66.6 70 57.1
CSS0036419 Camellia sinensis var. sinensis HOM05D000503 ORTHO05D000361 1.4e-09 66.2 61 57.4
Oeu015862.1 Olea europaea HOM05D000503 ORTHO05D000361 1.4e-09 66.2 61 60.7
Gohir.A04G099100 Gossypium hirsutum HOM05D000503 ORTHO05D000361 1.8e-09 65.9 45 68.9
Nitab4.5_0002312g0040 Nicotiana tabacum HOM05D000503 ORTHO05D000361 1.8e-09 65.9 61 55.7
Sed0009403 Sechium edule HOM05D000503 ORTHO05D000361 2.4e-09 65.5 58 51.7
DCAR_007112 Daucus carota HOM05D000503 ORTHO05D000361 3.1e-09 65.1 61 57.4
Peaxi162Scf00828g00013 Petunia axillaris HOM05D000503 ORTHO05D000361 3.1e-09 65.1 58 58.6
Ciclev10032281m.g Citrus clementina HOM05D000503 ORTHO05D000361 4.1e-09 64.7 45 66.7
CsaV3_5G031940 Cucumis sativus L. HOM05D000503 ORTHO05D000361 4.1e-09 64.7 80 40.0
GSVIVG01020146001 Vitis vinifera HOM05D000503 ORTHO05D000361 4.1e-09 64.7 59 61.0
Sabra10G0000400 Salix brachista HOM05D000503 ORTHO05D000361 5.4e-09 64.3 63 55.6
Sabra10G0028200 Salix brachista HOM05D000503 ORTHO05D000361 5.4e-09 64.3 63 55.6
TWI18G0009 Tripterygium wilfordii HOM05D000503 ORTHO05D000361 5.4e-09 64.3 58 58.6
Oeu041247.1 Olea europaea HOM05D000503 ORTHO05D000361 7.0e-09 63.9 61 60.7
Atru.chr11.1936 Acer truncatum HOM05D000503 ORTHO05D000361 1.2e-08 63.2 52 61.5
MSTRG.641 Avicennia marina HOM05D000503 ORTHO05D000361 1.2e-08 63.2 61 60.7
Cc11_g14050 Coffea canephora HOM05D000503 ORTHO05D000361 1.2e-08 63.2 61 54.1
Glyma.08G292400 Glycine max HOM05D000503 ORTHO05D000361 1.6e-08 62.8 58 50.0
QL03p067299 Quercus lobata HOM05D000503 ORTHO05D000361 1.6e-08 62.8 44 70.5
MELO3C012031.2 Cucumis melo HOM05D000503 ORTHO05D000361 2.0e-08 62.4 80 38.8
Eucgr.B03374 Eucalyptus grandis HOM05D000503 ORTHO05D000361 2.0e-08 62.4 59 55.9
CiPaw.05G145300 Carya illinoinensis HOM05D000503 ORTHO05D000361 2.7e-08 62.0 44 68.2
Sabra08G0146600 Salix brachista HOM05D000503 ORTHO05D000361 2.7e-08 62.0 63 54.0
Glyma.18G130900 Glycine max HOM05D000503 ORTHO05D000361 3.5e-08 61.6 58 51.7
Nn4g22941 Nelumbo nucifera HOM05D000503 ORTHO05D000361 3.5e-08 61.6 70 51.4
Phvul.003G056000 Phaseolus vulgaris HOM05D000503 ORTHO05D000361 3.5e-08 61.6 58 53.4
Potri.010G037800 Populus trichocarpa HOM05D000503 ORTHO05D000361 3.5e-08 61.6 63 54.0
Lj3A1047G37 Lonicera japonica HOM05D000503 ORTHO05D000361 4.5e-08 61.2 48 66.7
DCAR_024512 Daucus carota HOM05D000503 ORTHO05D000361 5.9e-08 60.8 58 56.9
Dinv13129 Davidia involucrata HOM05D000503 ORTHO05D000361 5.9e-08 60.8 62 51.6
VMungo1215G0270 Vigna mungo HOM05D000503 ORTHO05D000361 5.9e-08 60.8 46 65.2
Eucgr.B02571 Eucalyptus grandis HOM05D000503 ORTHO05D000361 7.8e-08 60.5 62 51.6
Glyma.01G037500 Glycine max HOM05D000503 ORTHO05D000361 1.0e-07 60.1 36 77.8
Glyma.02G027400 Glycine max HOM05D000503 ORTHO05D000361 1.0e-07 60.1 36 77.8
Phvul.002G076900 Phaseolus vulgaris HOM05D000503 ORTHO05D000361 1.0e-07 60.1 36 77.8
SalBow2G0894 Salvia bowleyana HOM05D000503 ORTHO05D000361 1.0e-07 60.1 65 58.5
SalBow2G1449 Salvia bowleyana HOM05D000503 ORTHO05D000361 1.0e-07 60.1 65 58.5
CSS0007928 Camellia sinensis var. sinensis HOM05D000503 ORTHO05D000361 1.3e-07 59.7 63 49.2
ClCG05G024950 Citrullus lanatus HOM05D000503 ORTHO05D000361 1.7e-07 59.3 58 43.1
CiPaw.11G032900 Carya illinoinensis HOM05D000503 ORTHO05D000361 2.3e-07 58.9 52 57.7
Haze_12123 Corylus avellana HOM05D000503 ORTHO05D000361 2.3e-07 58.9 43 67.4
Sed0010657 Sechium edule HOM05D000503 ORTHO05D000361 2.3e-07 58.9 59 55.9
CiPaw.06G076400 Carya illinoinensis HOM05D000503 ORTHO05D000361 2.9e-07 58.5 43 65.1
Lj4g0019308 Lotus japonicus HOM05D000503 ORTHO05D000361 2.9e-07 58.5 49 63.3
CSS0050000 Camellia sinensis var. sinensis HOM05D000503 ORTHO05D000361 3.9e-07 58.2 63 49.2
arahy.Tifrunner.gnm1.ann1.Q1XFSF Arachis hypogaea HOM05D000503 ORTHO05D000361 5.0e-07 57.8 43 65.1
arahy.Tifrunner.gnm1.ann1.QA99NK Arachis hypogaea HOM05D000503 ORTHO05D000361 5.0e-07 57.8 43 65.1
Hund02705 Selenicereus undatus HOM05D000503 ORTHO05D000361 5.0e-07 57.8 58 55.2
Aa31LG7G3810 Aethionema arabicum HOM05D000503 ORTHO05D000361 6.6e-07 57.4 54 59.3
Manes.06G099700 Manihot esculenta HOM05D000503 ORTHO05D000361 6.6e-07 57.4 41 68.3
TPR.G17326 Trifolium pratense HOM05D000503 ORTHO05D000361 6.6e-07 57.4 34 79.4
Cfa009092 Carpinus fangiana HOM05D000503 ORTHO05D000361 8.6e-07 57.0 43 67.4
Thhalv10008575m.g Eutrema salsugineum HOM05D000503 ORTHO05D000361 8.6e-07 57.0 59 52.5
PGR119G0976 Punica granatum HOM05D000503 ORTHO05D000361 8.6e-07 57.0 46 67.4
EL10Ac5g10850 Beta vulgaris HOM05D000503 ORTHO05D000361 1.1e-06 56.6 47 59.6
BcaC05g24882 Brassica carinata HOM05D000503 ORTHO05D000361 1.1e-06 56.6 62 53.2
AUR62026505 Chenopodium quinoa HOM05D000503 ORTHO05D000361 1.1e-06 56.6 58 53.4
Glyma.17G093900 Glycine max HOM05D000503 ORTHO05D000361 1.1e-06 56.6 43 65.1
Phvul.003G196500 Phaseolus vulgaris HOM05D000503 ORTHO05D000361 1.1e-06 56.6 43 65.1
Actinidia17808 Actinidia chinensis HOM05D001741 ORTHO05D010387 1.5e-06 56.2 34 79.4
AL2G16810 Arabidopsis lyrata HOM05D000503 ORTHO05D000361 1.5e-06 56.2 62 53.2
Lalb_Chr09g0326551 Lupinus albus HOM05D000503 ORTHO05D000361 1.5e-06 56.2 59 50.8
Phvul.003G196300 Phaseolus vulgaris HOM05D000503 ORTHO05D000361 1.5e-06 56.2 43 65.1
Sed0028149 Sechium edule HOM05D000503 ORTHO05D000361 1.5e-06 56.2 42 69.0
Aa31LG2G10300 Aethionema arabicum HOM05D000503 ORTHO05D000361 1.9e-06 55.8 58 55.2
BcaC07g38977 Brassica carinata HOM05D000503 ORTHO05D000361 1.9e-06 55.8 54 57.4
BcaC07g38978 Brassica carinata HOM05D000503 ORTHO05D000361 1.9e-06 55.8 54 57.4
A06p07100 Brassica napus HOM05D000503 ORTHO05D000361 1.9e-06 55.8 62 53.2
A08p30020 Brassica napus HOM05D000503 ORTHO05D000361 1.9e-06 55.8 54 57.4
C05p08590 Brassica napus HOM05D000503 ORTHO05D000361 1.9e-06 55.8 62 53.2
C05p08740 Brassica napus HOM05D000503 ORTHO05D000361 1.9e-06 55.8 62 53.2
C08p19190 Brassica napus HOM05D000503 ORTHO05D000361 1.9e-06 55.8 54 57.4
BolC8t49538H Brassica oleracea HOM05D000503 ORTHO05D000361 1.9e-06 55.8 54 57.4
BraA06t23925Z Brassica rapa HOM05D000503 ORTHO05D000361 1.9e-06 55.8 62 53.2
BraA08t34937Z Brassica rapa HOM05D000503 ORTHO05D000361 1.9e-06 55.8 54 57.4
Duzib068G0544 Durio zibethinus HOM05D000503 ORTHO05D000361 1.9e-06 55.8 46 58.7
Potri.008G193000 Populus trichocarpa HOM05D000503 ORTHO05D000361 1.9e-06 55.8 63 50.8
Actinidia37692 Actinidia chinensis HOM05D000503 ORTHO05D000361 2.5e-06 55.5 52 53.8
Aa31LG1G4480 Aethionema arabicum HOM05D000503 ORTHO05D000361 2.5e-06 55.5 62 51.6
AT1G10470 Arabidopsis thaliana HOM05D000503 ORTHO05D000361 2.5e-06 55.5 63 50.8
Thecc.03G002500 Theobroma cacao HOM05D000503 ORTHO05D000361 2.5e-06 55.5 45 60.0
BcaB03g12938 Brassica carinata HOM05D000503 ORTHO05D000361 3.3e-06 55.1 54 57.4
AUR62026310 Chenopodium quinoa HOM05D000503 ORTHO05D000361 3.3e-06 55.1 58 51.7
Ca_21877_v3 Cicer arietinum L. HOM05D000503 ORTHO05D000361 3.3e-06 55.1 43 62.8
Ca_21885_v3 Cicer arietinum L. HOM05D000503 ORTHO05D000361 3.3e-06 55.1 43 62.8
Lsat_1_v5_gn_8_162660 Lactuca sativa HOM05D000503 ORTHO05D000361 3.3e-06 55.1 59 50.8
MBI15_g18500_MAGBIO Magnolia biondii HOM05D000503 ORTHO05D000361 3.3e-06 55.1 53 50.9
Ah.11g046300 Amaranthus hybridus HOM05D000503 ORTHO05D000361 4.3e-06 54.7 35 74.3
AT1G59940 Arabidopsis thaliana HOM05D000503 ORTHO05D000361 4.3e-06 54.7 62 53.2
CARHR010610 Cardamine hirsuta HOM05D000503 ORTHO05D000361 4.3e-06 54.7 62 51.6
AUR62008295 Chenopodium quinoa HOM05D000503 ORTHO05D000361 4.3e-06 54.7 35 71.4
Dinv02656 Davidia involucrata HOM05D000503 ORTHO05D000361 4.3e-06 54.7 52 53.8
Lj9C455G4 Lonicera japonica HOM05D000503 ORTHO05D000361 4.3e-06 54.7 57 50.9
Lalb_Chr07g0182491 Lupinus albus HOM05D000503 ORTHO05D000361 4.3e-06 54.7 43 60.5
Lalb_Chr12g0201321 Lupinus albus HOM05D000503 ORTHO05D000361 4.3e-06 54.7 43 60.5
Medtr4g106590 Medicago truncatula HOM05D000503 ORTHO05D000361 4.3e-06 54.7 37 70.3
Psat4g055760 Pisum sativum HOM05D000503 ORTHO05D000361 4.3e-06 54.7 37 70.3
QL10p013702 Quercus lobata HOM05D000503 ORTHO05D000361 4.3e-06 54.7 40 67.5
THA.LOC104813855 Tarenaya hassleriana HOM05D000503 ORTHO05D000361 4.3e-06 54.7 65 49.2
AL1G21260 Arabidopsis lyrata HOM05D000503 ORTHO05D000361 5.6e-06 54.3 60 50.0
BcaC05g24929 Brassica carinata HOM05D000503 ORTHO05D000361 5.6e-06 54.3 62 51.6
BcaC07g41823 Brassica carinata HOM05D000503 ORTHO05D000361 5.6e-06 54.3 62 51.6
BolC5t29611H Brassica oleracea HOM05D000503 ORTHO05D000361 5.6e-06 54.3 62 51.6
CANSAT80G1280 Cannabis sativa HOM05D000503 ORTHO05D000361 5.6e-06 54.3 40 67.5
Ca_24166_v3 Cicer arietinum L. HOM05D000503 ORTHO05D000361 5.6e-06 54.3 34 76.5
Lj2g0021492 Lotus japonicus HOM05D000503 ORTHO05D000361 5.6e-06 54.3 44 63.6
Lalb_Chr05g0217281 Lupinus albus HOM05D000503 ORTHO05D000361 5.6e-06 54.3 57 52.6
MD06G1182400 Malus domestica HOM05D000503 ORTHO05D000361 5.6e-06 54.3 52 59.6
Medtr5g036480 Medicago truncatula HOM05D000503 ORTHO05D000361 5.6e-06 54.3 34 76.5
Hund05930 Selenicereus undatus HOM05D000503 ORTHO05D000361 5.6e-06 54.3 60 50.0
GSVIVG01023804001 Vitis vinifera HOM05D001741 ORTHO05D010387 5.6e-06 54.3 42 61.9
FAN08G1677 Fragaria x ananassa HOM05D000503 ORTHO05D000361 7.3e-06 53.9 54 51.9
THA.LOC104823668 Tarenaya hassleriana HOM05D000503 ORTHO05D000361 7.3e-06 53.9 58 50.0
Aqoxy3G03144 Aquilegia oxysepala HOM05D000503 ORTHO05D000361 9.5e-06 53.5 68 50.0
BcaB02g06970 Brassica carinata HOM05D000503 ORTHO05D000361 9.5e-06 53.5 43 58.1
A08p33980 Brassica napus HOM05D000503 ORTHO05D000361 9.5e-06 53.5 62 51.6
C08p13700 Brassica napus HOM05D000503 ORTHO05D000361 9.5e-06 53.5 62 51.6
BolC8t49006H Brassica oleracea HOM05D000503 ORTHO05D000361 9.5e-06 53.5 62 51.6
BraA08t35311Z Brassica rapa HOM05D000503 ORTHO05D000361 9.5e-06 53.5 62 51.6
Carub.0001s0990 Capsella rubella HOM05D000503 ORTHO05D000361 9.5e-06 53.5 62 46.8
Carub.0001s1868 Capsella rubella HOM05D000503 ORTHO05D000361 9.5e-06 53.5 56 55.4
Cfa019060 Carpinus fangiana HOM05D000503 ORTHO05D000361 9.5e-06 53.5 40 67.5
Haze_07428 Corylus avellana HOM05D000503 ORTHO05D000361 9.5e-06 53.5 40 67.5
Thhalv10021491m.g Eutrema salsugineum HOM05D000503 ORTHO05D000361 9.5e-06 53.5 54 55.6
FAN06G1891 Fragaria x ananassa HOM05D000503 ORTHO05D000361 9.5e-06 53.5 54 51.9
FAN16G1314 Fragaria x ananassa HOM05D000503 ORTHO05D000361 9.5e-06 53.5 54 51.9
Nitab4.5_0003786g0010 Nicotiana tabacum HOM05D000503 ORTHO05D000361 9.5e-06 53.5 45 64.4
Potri.015G070000 Populus trichocarpa HOM05D000503 ORTHO05D000361 9.5e-06 53.5 40 65.0
Sabra15G0094100 Salix brachista HOM05D000503 ORTHO05D000361 9.5e-06 53.5 40 65.0


User provided reference genes

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