Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv17642 Davidia involucrata HOM05D004221 ORTHO05D004998 1.1e-69 266.5 136 100.0
Nn3g18605 Nelumbo nucifera HOM05D004221 ORTHO05D004998 2.0e-55 219.2 131 86.3
Hma1.2p1_0513F.1_g169420 Hydrangea macrophylla HOM05D004221 ORTHO05D004998 4.9e-54 214.5 122 88.5
CSS0001435 Camellia sinensis var. sinensis HOM05D004221 ORTHO05D004998 6.4e-54 214.2 131 85.5
Actinidia04067 Actinidia chinensis HOM05D004221 ORTHO05D004998 8.4e-54 213.8 133 82.7
Hund24383 Selenicereus undatus HOM05D004221 ORTHO05D004998 3.2e-53 211.8 125 84.8
Nitab4.5_0013217g0020 Nicotiana tabacum HOM05D004221 ORTHO05D004998 4.2e-53 211.5 131 84.7
Actinidia04331 Actinidia chinensis HOM05D004221 ORTHO05D004998 7.1e-53 210.7 133 81.2
TAR629G3528 Trochodendron aralioides HOM05D004221 ORTHO05D004998 9.3e-53 210.3 127 85.0
TAR629G0713 Trochodendron aralioides HOM05D004221 ORTHO05D004998 1.6e-52 209.5 127 84.3
Nitab4.5_0000069g0160 Nicotiana tabacum HOM05D004221 ORTHO05D004998 2.1e-52 209.1 129 84.5
Rhsim09G0069500 Rhododendron simsii HOM05D004221 ORTHO05D004998 2.7e-52 208.8 137 81.0
COL.COLO4_33086 Corchorus olitorius HOM05D004221 ORTHO05D004998 3.5e-52 208.4 127 81.9
Manes.11G108400 Manihot esculenta HOM05D004221 ORTHO05D004998 3.5e-52 208.4 132 81.1
PGR044G1895 Punica granatum HOM05D004221 ORTHO05D004998 3.5e-52 208.4 131 82.4
CAN.G282.46 Capsicum annuum HOM05D004221 ORTHO05D004998 4.6e-52 208.0 121 86.8
Solyc01g008270.3 Solanum lycopersicum HOM05D004221 ORTHO05D004998 4.6e-52 208.0 121 86.8
Sopen01g003790 Solanum pennellii HOM05D004221 ORTHO05D004998 4.6e-52 208.0 121 86.8
Lsat_1_v5_gn_4_64581 Lactuca sativa HOM05D004221 ORTHO05D004998 7.8e-52 207.2 122 84.4
vmacro15987 Vaccinium macrocarpon HOM05D004221 ORTHO05D004998 7.8e-52 207.2 129 83.7
Thecc.02G156600 Theobroma cacao HOM05D004221 ORTHO05D004998 1.3e-51 206.5 130 78.5
PGSC0003DMG400016397 Solanum tuberosum HOM05D004221 ORTHO05D004998 1.7e-51 206.1 121 86.0
Potri.005G090100 Populus trichocarpa HOM05D004221 ORTHO05D004998 3.0e-51 205.3 121 84.3
PSO017G5121 Papaver somniferum HOM05D004221 ORTHO05D004998 5.1e-51 204.5 117 88.9
PSO170G6579 Papaver somniferum HOM05D004221 ORTHO05D004998 5.1e-51 204.5 117 88.9
Sed0003164 Sechium edule HOM05D004221 ORTHO05D004998 6.6e-51 204.1 134 79.1
CiPaw.06G062100 Carya illinoinensis HOM05D004221 ORTHO05D004998 1.1e-50 203.4 121 83.5
Cpa.g.sc60.76 Carica papaya HOM05D004221 ORTHO05D004998 1.5e-50 203.0 124 81.5
Cfa008767 Carpinus fangiana HOM05D004221 ORTHO05D004998 1.9e-50 202.6 127 80.3
Cc00_g07040 Coffea canephora HOM05D004221 ORTHO05D004998 1.9e-50 202.6 114 88.6
MSTRG.13679 Avicennia marina HOM05D004221 ORTHO05D004998 2.5e-50 202.2 118 86.4
Eucgr.J00883 Eucalyptus grandis HOM05D004221 ORTHO05D004998 2.5e-50 202.2 122 84.4
Lj3A847T45 Lonicera japonica HOM05D004221 ORTHO05D004998 2.5e-50 202.2 115 87.0
Gohir.A01G012400 Gossypium hirsutum HOM05D004221 ORTHO05D004998 5.6e-50 201.1 121 82.6
HPP92_005060 Vanilla planifolia HOM05D004221 ORTHO05D004998 5.6e-50 201.1 121 81.8
Ciclev10032992m.g Citrus clementina HOM05D004221 ORTHO05D004998 7.3e-50 200.7 117 85.5
ClCG01G008100 Citrullus lanatus HOM05D004221 ORTHO05D004998 9.6e-50 200.3 128 78.9
Gorai.002G015400 Gossypium raimondii HOM05D004221 ORTHO05D004998 9.6e-50 200.3 121 82.6
THA.LOC104800677 Tarenaya hassleriana HOM05D004221 ORTHO05D004998 9.6e-50 200.3 118 83.1
Gohir.D01G013600 Gossypium hirsutum HOM05D004221 ORTHO05D004998 1.3e-49 199.9 121 81.8
HanXRQChr04g0111871 Helianthus annuus HOM05D004221 ORTHO05D004998 1.6e-49 199.5 131 78.6
Duzib132G0545 Durio zibethinus HOM05D004221 ORTHO05D004998 2.1e-49 199.1 121 81.8
Duzib132G0858 Durio zibethinus HOM05D004221 ORTHO05D004998 2.1e-49 199.1 121 81.8
Potri.007G074042 Populus trichocarpa HOM05D004221 ORTHO05D004998 2.1e-49 199.1 133 74.4
CsaV3_5G020730 Cucumis sativus L. HOM05D004221 ORTHO05D004998 2.8e-49 198.7 130 76.9
Duzib132G0203 Durio zibethinus HOM05D004221 ORTHO05D004998 2.8e-49 198.7 126 80.2
Migut.E00685 Erythranthe guttata HOM05D004221 ORTHO05D004998 2.8e-49 198.7 118 83.1
EL10Ac9g22978 Beta vulgaris HOM05D004221 ORTHO05D004998 3.6e-49 198.4 127 78.0
AUR62032953 Chenopodium quinoa HOM05D004221 ORTHO05D004998 3.6e-49 198.4 127 77.2
DCAR_023468 Daucus carota HOM05D004221 ORTHO05D004998 3.6e-49 198.4 115 85.2
GSVIVG01026144001 Vitis vinifera HOM05D004221 ORTHO05D004998 3.6e-49 198.4 114 87.7
ECA232G2799 Erigeron canadensis HOM05D004221 ORTHO05D004998 4.8e-49 198.0 131 76.3
THA.LOC104818379 Tarenaya hassleriana HOM05D004221 ORTHO05D004998 4.8e-49 198.0 116 83.6
Duzib052G1226 Durio zibethinus HOM05D004221 ORTHO05D004998 6.2e-49 197.6 127 78.7
CANSAT78G1084 Cannabis sativa HOM05D004221 ORTHO05D004998 1.1e-48 196.8 130 79.2
Lalb_Chr06g0163921 Lupinus albus HOM05D004221 ORTHO05D004998 1.8e-48 196.1 131 77.9
MD13G1003600 Malus domestica HOM05D004221 ORTHO05D004998 5.3e-48 194.5 118 82.2
arahy.Tifrunner.gnm1.ann1.8BKN44 Arachis hypogaea HOM05D004221 ORTHO05D004998 9.0e-48 193.7 117 82.9
arahy.Tifrunner.gnm1.ann1.G8X8S8 Arachis hypogaea HOM05D004221 ORTHO05D004998 9.0e-48 193.7 117 82.9
arahy.Tifrunner.gnm1.ann1.VLL77W Arachis hypogaea HOM05D004221 ORTHO05D004998 9.0e-48 193.7 117 82.9
MD16G1003800 Malus domestica HOM05D004221 ORTHO05D004998 9.0e-48 193.7 118 80.5
Sabra07G0062100 Salix brachista HOM05D004221 ORTHO05D004998 1.2e-47 193.4 118 79.7
SGA_v2.0_scaffold256G45657 Striga asiatica HOM05D004221 ORTHO05D004998 1.5e-47 193.0 114 84.2
Atru.chr11.1114 Acer truncatum HOM05D004221 ORTHO05D004998 2.0e-47 192.6 131 74.8
Aa31LG11G2750 Aethionema arabicum HOM05D004221 ORTHO05D004998 2.0e-47 192.6 118 80.5
Aqoxy3G04291 Aquilegia oxysepala HOM05D004221 ORTHO05D004998 2.6e-47 192.2 121 79.3
BcaB04g19880 Brassica carinata HOM05D004221 ORTHO05D004998 2.6e-47 192.2 128 76.6
CDE02G2963 Ceratophyllum demersum HOM05D004221 ORTHO05D004998 2.6e-47 192.2 117 81.2
Prupe.1G348800 Prunus persica HOM05D004221 ORTHO05D004998 3.4e-47 191.8 118 80.5
AT5G23290 Arabidopsis thaliana HOM05D004221 ORTHO05D004998 4.5e-47 191.4 118 79.7
BcaC04g23487 Brassica carinata HOM05D004221 ORTHO05D004998 4.5e-47 191.4 118 79.7
A06p34250 Brassica napus HOM05D004221 ORTHO05D004998 4.5e-47 191.4 118 79.7
C07p44270 Brassica napus HOM05D004221 ORTHO05D004998 4.5e-47 191.4 118 79.7
C09p07830 Brassica napus HOM05D004221 ORTHO05D004998 4.5e-47 191.4 118 79.7
BolC7t44950H Brassica oleracea HOM05D004221 ORTHO05D004998 4.5e-47 191.4 118 79.7
BolC9t53699H Brassica oleracea HOM05D004221 ORTHO05D004998 4.5e-47 191.4 118 79.7
BraA06t26357Z Brassica rapa HOM05D004221 ORTHO05D004998 4.5e-47 191.4 118 79.7
Carub.0006s2106 Capsella rubella HOM05D004221 ORTHO05D004998 4.5e-47 191.4 118 79.7
Os10g0488100 Oryza sativa ssp. japonica HOM05D004221 ORTHO05D004998 4.5e-47 191.4 118 80.5
TWI77G0364 Tripterygium wilfordii HOM05D004221 ORTHO05D004998 4.5e-47 191.4 134 75.4
A09p07020 Brassica napus HOM05D004221 ORTHO05D004998 5.8e-47 191.0 118 79.7
BraA09t36350Z Brassica rapa HOM05D004221 ORTHO05D004998 5.8e-47 191.0 118 79.7
AUR62017728 Chenopodium quinoa HOM05D004221 ORTHO05D004998 5.8e-47 191.0 127 76.4
CARHR190250 Cardamine hirsuta HOM05D004221 ORTHO05D004998 7.6e-47 190.7 118 79.7
ATR0618G284 Amborella trichopoda HOM05D004221 ORTHO05D004998 9.9e-47 190.3 118 81.4
AL6G34550 Arabidopsis lyrata HOM05D004221 ORTHO05D004998 1.7e-46 189.5 118 78.8
Haze_11779 Corylus avellana HOM05D004221 ORTHO05D004998 3.8e-46 188.3 159 64.8
Lj5g0004809 Lotus japonicus HOM05D004221 ORTHO05D004998 3.8e-46 188.3 133 74.4
TWI74G0522 Tripterygium wilfordii HOM05D004221 ORTHO05D004998 3.8e-46 188.3 134 73.9
Zm00001eb045320 Zea mays HOM05D004221 ORTHO05D004998 3.8e-46 188.3 118 80.5
SalBow2G0865 Salvia bowleyana HOM05D004221 ORTHO05D004998 6.4e-46 187.6 115 81.7
unitig_699.g19553 Utricularia gibba HOM05D004221 ORTHO05D004998 6.4e-46 187.6 124 77.4
Thhalv10005074m.g Eutrema salsugineum HOM05D004221 ORTHO05D004998 1.4e-45 186.4 118 78.0
RcHm_v2.0_Chr2g0169341 Rosa chinensis HOM05D004221 ORTHO05D004998 1.4e-45 186.4 115 79.1
RcHm_v2.0_Chr4g0446851 Rosa chinensis HOM05D004221 ORTHO05D004998 1.4e-45 186.4 118 78.0
RcHm_v2.0_Chr6g0253901 Rosa chinensis HOM05D004221 ORTHO05D004998 1.4e-45 186.4 115 79.1
FAN07G0046 Fragaria x ananassa HOM05D004221 ORTHO05D004998 2.4e-45 185.7 118 77.1
RcHm_v2.0_Chr1g0343381 Rosa chinensis HOM05D004221 ORTHO05D004998 2.4e-45 185.7 115 79.1
RcHm_v2.0_Chr4g0389221 Rosa chinensis HOM05D004221 ORTHO05D004998 3.2e-45 185.3 115 79.1
Sp2g23860 Schrenkiella parvula HOM05D004221 ORTHO05D004998 4.2e-45 184.9 118 78.0
FvH4_4g37090 Fragaria vesca HOM05D004221 ORTHO05D004998 5.4e-45 184.5 118 77.1
FAN12G1261 Fragaria x ananassa HOM05D004221 ORTHO05D004998 5.4e-45 184.5 117 77.8
Glyma.20G103300 Glycine max HOM05D004221 ORTHO05D004998 7.1e-45 184.1 117 78.6
MBI06_g27498_MAGBIO Magnolia biondii HOM05D004221 ORTHO05D004998 7.1e-45 184.1 121 78.5
Sc26g0002050 Simmondsia chinensis HOM05D004221 ORTHO05D004998 7.1e-45 184.1 117 78.6
FAN17G0592 Fragaria x ananassa HOM05D004221 ORTHO05D004998 1.2e-44 183.3 118 75.4
CDE04G0710 Ceratophyllum demersum HOM05D004221 ORTHO05D004998 2.1e-44 182.6 141 70.2
FAN10G4155 Fragaria x ananassa HOM05D004221 ORTHO05D004998 3.5e-44 181.8 118 74.6
RcHm_v2.0_Chr4g0391701 Rosa chinensis HOM05D004221 ORTHO05D004998 3.5e-44 181.8 120 75.0
RcHm_v2.0_Chr5g0039981 Rosa chinensis HOM05D004221 ORTHO05D004998 3.5e-44 181.8 115 77.4
FAN03G0273 Fragaria x ananassa HOM05D004221 ORTHO05D004998 6.0e-44 181.0 118 73.7
FAN23G3078 Fragaria x ananassa HOM05D004221 ORTHO05D004998 6.0e-44 181.0 118 73.7
RcHm_v2.0_Chr4g0391031 Rosa chinensis HOM05D004221 ORTHO05D004998 6.0e-44 181.0 115 76.5
RcHm_v2.0_Chr5g0070771 Rosa chinensis HOM05D004221 ORTHO05D004998 7.9e-44 180.6 115 76.5
FAN15G1018 Fragaria x ananassa HOM05D004221 ORTHO05D004998 1.0e-43 180.3 118 73.7
Sabra05G0074200 Salix brachista HOM05D004221 ORTHO05D004998 1.8e-43 179.5 161 60.9
VMungo0720G0328 Vigna mungo HOM05D004221 ORTHO05D004998 2.3e-43 179.1 131 70.2
Glyma.10G286000 Glycine max HOM05D004221 ORTHO05D004998 6.7e-43 177.6 117 75.2
Medtr1g114500 Medicago truncatula HOM05D004221 ORTHO05D004998 8.7e-43 177.2 117 74.4
Ca_11255_v3 Cicer arietinum L. HOM05D004221 ORTHO05D004998 1.5e-42 176.4 115 77.4
Phvul.007G014900 Phaseolus vulgaris HOM05D004221 ORTHO05D004998 1.9e-42 176.0 131 68.7
Psat6g233960 Pisum sativum HOM05D004221 ORTHO05D004998 2.5e-42 175.6 117 73.5
TAR371G0536 Trochodendron aralioides HOM05D004221 ORTHO05D004998 2.5e-42 175.6 130 71.5
FAN07G1220 Fragaria x ananassa HOM05D004221 ORTHO05D004998 3.3e-42 175.3 114 74.6
AL2G24680 Arabidopsis lyrata HOM05D004221 ORTHO05D004998 5.6e-42 174.5 110 76.4
AL8G16830 Arabidopsis lyrata HOM05D004221 ORTHO05D004998 5.6e-42 174.5 110 76.4
TPR.G4058 Trifolium pratense HOM05D004221 ORTHO05D004998 9.6e-42 173.7 117 73.5
SGA_v2.0_scaffold358G49836 Striga asiatica HOM05D004221 ORTHO05D004998 6.9e-40 167.5 151 62.3
Peaxi162Scf00021g02223 Petunia axillaris HOM05D004221 ORTHO05D004998 4.5e-39 164.9 122 73.0
FAN10G1077 Fragaria x ananassa HOM05D004221 ORTHO05D004998 7.6e-39 164.1 118 68.6
FAN03G3278 Fragaria x ananassa HOM05D004221 ORTHO05D004998 9.9e-39 163.7 118 68.6
SEGI_18337 Sequoiadendron giganteum HOM05D004221 ORTHO05D004998 9.9e-39 163.7 116 68.1
FAN17G2528 Fragaria x ananassa HOM05D004221 ORTHO05D004998 1.4e-37 159.8 118 67.8
Mapoly0041s0007 Marchantia polymorpha HOM05D004221 ORTHO05D004998 4.2e-37 158.3 120 62.5
SMO114G0084 Selaginella moellendorffii HOM05D004221 ORTHO05D004998 1.2e-36 156.8 116 62.1
Ah.01g012690 Amaranthus hybridus HOM05D004221 ORTHO05D004998 4.6e-36 154.8 101 80.2
Pp3c1_32320 Physcomitrium patens HOM05D004221 ORTHO05D004998 4.6e-36 154.8 118 66.1
AUR62032946 Chenopodium quinoa HOM05D004221 ORTHO05D004998 1.8e-35 152.9 103 74.8
AagrBONN_evm.TU.Sc2ySwM_117.4013 Anthoceros agrestis HOM05D004221 ORTHO05D004998 3.9e-35 151.8 122 59.0
Oeu013195.1 Olea europaea HOM05D004221 ORTHO05D004998 9.6e-34 147.1 87 86.2
Oeu041209.1 Olea europaea HOM05D004221 ORTHO05D004998 1.5e-31 139.8 101 78.2
SHI21211 Sapria himalayana HOM05D004221 ORTHO05D004998 4.2e-29 131.7 200 41.5
MELO3C000273.2 Cucumis melo HOM05D004221 ORTHO05D004998 1.6e-25 119.8 70 85.7
Lj9A327T34 Lonicera japonica HOM05D004221 ORTHO05D004998 1.8e-24 116.3 77 76.6
RcHm_v2.0_Chr5g0067401 Rosa chinensis HOM05D004221 ORTHO05D004998 2.4e-24 115.9 71 83.1
RcHm_v2.0_Chr6g0266371 Rosa chinensis HOM05D004221 ORTHO05D004998 2.4e-24 115.9 71 83.1
CBR_g19844 Chara braunii HOM05D002142 ORTHO05D001189 6.9e-24 114.4 120 45.0
RcHm_v2.0_Chr3g0478071 Rosa chinensis HOM05D004221 ORTHO05D004998 1.5e-23 113.2 71 80.3
MCO07G569 Micromonas commoda HOM05D004221 ORTHO05D004998 4.5e-23 111.7 114 45.6
MELO3C033736.2 Cucumis melo HOM05D004221 ORTHO05D004998 5.0e-22 108.2 64 85.9
SEGI_37490 Sequoiadendron giganteum HOM05D004221 ORTHO05D004998 1.1e-21 107.1 62 75.8
RcHm_v2.0_Chr6g0274601 Rosa chinensis HOM05D004221 ORTHO05D004998 3.6e-20 102.1 65 80.0
Gorai.002G209700 Gossypium raimondii HOM05D004221 ORTHO05D004998 5.1e-19 98.2 59 76.3
Gohir.D01G168833 Gossypium hirsutum HOM05D004221 ORTHO05D004998 6.7e-19 97.8 59 76.3
Gohir.A01G178033 Gossypium hirsutum HOM05D004221 ORTHO05D004998 1.1e-16 90.5 59 71.2
PRCOL_00006790 Prasinoderma coloniale HOM05D004221 ORTHO05D004998 9.1e-16 87.4 115 40.0
A02p41030 Brassica napus HOM05D004221 ORTHO05D004998 5.9e-15 84.7 54 70.4
MBI19_g48155_MAGBIO Magnolia biondii HOM05D004221 ORTHO05D004998 7.7e-15 84.3 64 71.9
MBI19_g31737_MAGBIO Magnolia biondii HOM05D004221 ORTHO05D004998 5.0e-14 81.6 64 70.3
Sed0018067 Sechium edule HOM05D004221 ORTHO05D004998 8.5e-14 80.9 70 64.3
Cre12.g523150 Chlamydomonas reinhardtii HOM05D004221 ORTHO05D004998 2.1e-12 76.3 108 34.3
SalBow3G1738 Salvia bowleyana HOM05D004221 ORTHO05D004998 2.3e-11 72.8 50 68.0
AL1G29290 Arabidopsis lyrata HOM05D004221 ORTHO05D004998 3.7e-09 65.5 49 67.3
AL8G24780 Arabidopsis lyrata HOM05D004221 ORTHO05D004998 3.7e-09 65.5 49 67.3
SalBow6G4331 Salvia bowleyana HOM05D004221 ORTHO05D004998 9.1e-08 60.8 41 75.6
Oeu013194.1 Olea europaea HOM05D004221 ORTHO05D004998 8.5e-06 54.3 28 82.1


User provided reference genes

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