Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv17616 Davidia involucrata HOM05D006333 ORTHO05D007799 3.6e-132 474.9 243 100.0
Hma1.2p1_0044F.1_g026090 Hydrangea macrophylla HOM05D006333 ORTHO05D007799 3.9e-102 375.2 242 79.3
Lj3A849G43 Lonicera japonica HOM05D006333 ORTHO05D007799 4.7e-100 368.2 243 77.8
Thecc.02G159600 Theobroma cacao HOM05D006333 ORTHO05D007799 1.2e-98 363.6 243 77.8
CSS0049289 Camellia sinensis var. sinensis HOM05D006333 ORTHO05D007799 2.6e-98 362.5 243 77.4
Nitab4.5_0008825g0020 Nicotiana tabacum HOM05D006333 ORTHO05D007799 3.4e-98 362.1 243 77.4
COL.COLO4_08588 Corchorus olitorius HOM05D006333 ORTHO05D007799 7.6e-98 360.9 243 77.0
Ciclev10032700m.g Citrus clementina HOM05D006333 ORTHO05D007799 3.8e-97 358.6 236 77.5
Sed0022709 Sechium edule HOM05D006333 ORTHO05D007799 1.1e-96 357.1 243 76.1
GSVIVG01012055001 Vitis vinifera HOM05D006333 ORTHO05D007799 1.9e-96 356.3 226 81.9
Hund24376 Selenicereus undatus HOM05D006333 ORTHO05D007799 4.2e-96 355.1 243 75.7
Sopen02g004090 Solanum pennellii HOM05D006333 ORTHO05D007799 5.4e-96 354.8 241 76.3
Duzib132G1109 Durio zibethinus HOM05D006333 ORTHO05D007799 2.1e-95 352.8 243 75.3
Solyc02g014720.4 Solanum lycopersicum HOM05D006333 ORTHO05D007799 2.7e-95 352.4 243 75.7
Rhsim09G0071800 Rhododendron simsii HOM05D006333 ORTHO05D007799 3.5e-95 352.1 243 76.1
MELO3C024016.2 Cucumis melo HOM05D006333 ORTHO05D007799 4.6e-95 351.7 243 75.3
HanXRQChr12g0366301 Helianthus annuus HOM05D006333 ORTHO05D007799 3.9e-94 348.6 243 74.5
CsaV3_3G031750 Cucumis sativus L. HOM05D006333 ORTHO05D007799 5.1e-94 348.2 243 75.3
Gohir.A13G060400 Gossypium hirsutum HOM05D006333 ORTHO05D007799 5.1e-94 348.2 243 73.7
Aa31LG7G2140 Aethionema arabicum HOM05D006333 ORTHO05D007799 6.6e-94 347.8 243 74.9
CiPaw.05G169800 Carya illinoinensis HOM05D006333 ORTHO05D007799 6.6e-94 347.8 243 74.1
Gohir.D13G061500 Gossypium hirsutum HOM05D006333 ORTHO05D007799 8.7e-94 347.4 243 74.1
CAN.G1011.5 Capsicum annuum HOM05D006333 ORTHO05D007799 1.1e-93 347.1 239 74.5
Nitab4.5_0003092g0070 Nicotiana tabacum HOM05D006333 ORTHO05D007799 1.9e-93 346.3 231 77.1
TWI53G1586 Tripterygium wilfordii HOM05D006333 ORTHO05D007799 1.9e-93 346.3 243 74.1
Gorai.013G070000 Gossypium raimondii HOM05D006333 ORTHO05D007799 3.3e-93 345.5 249 73.1
Medtr4g023480 Medicago truncatula HOM05D006333 ORTHO05D007799 5.6e-93 344.7 243 74.1
CANSAT56G2519 Cannabis sativa HOM05D006333 ORTHO05D007799 7.3e-93 344.4 243 74.1
RcHm_v2.0_Chr4g0446761 Rosa chinensis HOM05D006333 ORTHO05D007799 7.3e-93 344.4 240 75.4
Prupe.1G347700 Prunus persica HOM05D006333 ORTHO05D007799 1.6e-92 343.2 240 77.1
Aqoxy3G04253 Aquilegia oxysepala HOM05D006333 ORTHO05D007799 2.8e-92 342.4 241 74.3
Psat7g233400 Pisum sativum HOM05D006333 ORTHO05D007799 2.4e-91 339.3 240 73.3
FvH4_4g36970 Fragaria vesca HOM05D006333 ORTHO05D007799 5.3e-91 338.2 240 73.8
Potri.007G072000 Populus trichocarpa HOM05D006333 ORTHO05D007799 6.9e-91 337.8 236 75.8
Manes.04G057700 Manihot esculenta HOM05D006333 ORTHO05D007799 9.0e-91 337.4 243 71.2
ECA233G4371 Erigeron canadensis HOM05D006333 ORTHO05D007799 1.2e-90 337.0 242 73.1
Lj3g0001632 Lotus japonicus HOM05D006333 ORTHO05D007799 2.0e-90 336.3 238 72.3
MSTRG.11948 Avicennia marina HOM05D006333 ORTHO05D007799 3.4e-90 335.5 243 72.4
FAN07G1904 Fragaria x ananassa HOM05D006333 ORTHO05D007799 3.4e-90 335.5 240 72.9
Sc17g0000100 Simmondsia chinensis HOM05D006333 ORTHO05D007799 4.5e-90 335.1 243 71.2
Phvul.011G028900 Phaseolus vulgaris HOM05D006333 ORTHO05D007799 7.6e-90 334.3 241 71.4
Cfa008751 Carpinus fangiana HOM05D006333 ORTHO05D007799 1.3e-89 333.6 243 72.0
MD13G1004800 Malus domestica HOM05D006333 ORTHO05D007799 1.3e-89 333.6 233 75.5
PSO782G2700 Papaver somniferum HOM05D006333 ORTHO05D007799 1.3e-89 333.6 235 74.5
Glyma.12G026000 Glycine max HOM05D006333 ORTHO05D007799 1.7e-89 333.2 233 72.5
Lsat_1_v5_gn_8_33120 Lactuca sativa HOM05D006333 ORTHO05D007799 1.7e-89 333.2 247 72.5
AT1G17330 Arabidopsis thaliana HOM05D006333 ORTHO05D007799 2.2e-89 332.8 233 73.8
Eucgr.J00869 Eucalyptus grandis HOM05D006333 ORTHO05D007799 2.9e-89 332.4 239 72.4
AL1G29580 Arabidopsis lyrata HOM05D006333 ORTHO05D007799 4.9e-89 331.6 233 73.8
CARHR017920 Cardamine hirsuta HOM05D006333 ORTHO05D007799 6.4e-89 331.3 236 73.7
Thhalv10008690m.g Eutrema salsugineum HOM05D006333 ORTHO05D007799 6.4e-89 331.3 241 71.8
Prupe.1G347900 Prunus persica HOM05D006333 ORTHO05D007799 8.4e-89 330.9 240 74.2
Atru.chr11.1164 Acer truncatum HOM05D006333 ORTHO05D007799 1.4e-88 330.1 240 70.4
Nn5g28807 Nelumbo nucifera HOM05D006333 ORTHO05D007799 1.4e-88 330.1 236 72.5
Ca_19901_v3 Cicer arietinum L. HOM05D006333 ORTHO05D007799 4.2e-88 328.6 237 72.2
EL10Ac9g22952 Beta vulgaris HOM05D006333 ORTHO05D007799 7.1e-88 327.8 241 71.0
THA.LOC104808350 Tarenaya hassleriana HOM05D006333 ORTHO05D007799 1.6e-87 326.6 236 71.2
VMungo1127G0165 Vigna mungo HOM05D006333 ORTHO05D007799 1.6e-87 326.6 233 71.7
PGR044G2499 Punica granatum HOM05D006333 ORTHO05D007799 6.0e-87 324.7 234 72.2
FAN17G3063 Fragaria x ananassa HOM05D006333 ORTHO05D007799 5.1e-86 321.6 264 66.3
Migut.A00709 Erythranthe guttata HOM05D006333 ORTHO05D007799 8.7e-86 320.9 243 70.4
Peaxi162Scf00334g00421 Petunia axillaris HOM05D006333 ORTHO05D007799 1.5e-85 320.1 219 76.3
Sp1g15450 Schrenkiella parvula HOM05D006333 ORTHO05D007799 4.3e-85 318.5 242 69.8
MBI06_g42293_MAGBIO Magnolia biondii HOM05D006333 ORTHO05D007799 9.6e-85 317.4 241 70.5
BcaC05g25649 Brassica carinata HOM05D006333 ORTHO05D007799 1.3e-84 317.0 243 69.5
CSS0015547 Camellia sinensis var. sinensis HOM05D006333 ORTHO05D007799 1.3e-84 317.0 243 70.8
BolC5t30276H Brassica oleracea HOM05D006333 ORTHO05D007799 2.8e-84 315.8 243 69.1
C05p15710 Brassica napus HOM05D006333 ORTHO05D007799 3.7e-84 315.5 243 69.1
Carub.0001s1708 Capsella rubella HOM05D006333 ORTHO05D007799 1.1e-83 313.9 236 70.8
Cc11_g02420 Coffea canephora HOM05D006333 ORTHO05D007799 5.3e-83 311.6 241 69.7
SGA_v2.0_scaffold146G36264 Striga asiatica HOM05D006333 ORTHO05D007799 5.3e-83 311.6 260 65.8
FAN12G1853 Fragaria x ananassa HOM05D006333 ORTHO05D007799 9.0e-83 310.8 240 69.2
A06p13260 Brassica napus HOM05D006333 ORTHO05D007799 4.5e-82 308.5 236 69.1
BraA06t24479Z Brassica rapa HOM05D006333 ORTHO05D007799 1.3e-81 307.0 243 67.5
BcaB07g34033 Brassica carinata HOM05D006333 ORTHO05D007799 3.2e-80 302.4 238 68.1
unitig_32.g11605 Utricularia gibba HOM05D006333 ORTHO05D007799 4.2e-80 302.0 243 64.2
ClCG10G012010 Citrullus lanatus HOM05D006333 ORTHO05D007799 5.5e-80 301.6 226 72.6
Atru.chr11.2675 Acer truncatum HOM05D006333 ORTHO05D007799 1.2e-79 300.4 235 66.4
PSO063G3232 Papaver somniferum HOM05D006333 ORTHO05D007799 3.5e-79 298.9 265 63.0
Atru.chr11.2676 Acer truncatum HOM05D006333 ORTHO05D007799 4.6e-79 298.5 235 66.4
Sabra07G0060700 Salix brachista HOM05D006333 ORTHO05D007799 1.0e-78 297.4 262 65.3
TPR.G9857 Trifolium pratense HOM05D006333 ORTHO05D007799 1.0e-78 297.4 212 71.2
DCAR_008496 Daucus carota HOM05D003141 ORTHO05D003633 2.5e-77 292.7 214 72.4
ATR0618G379 Amborella trichopoda HOM05D006333 ORTHO05D007799 4.3e-77 292.0 240 64.2
AUR62017701 Chenopodium quinoa HOM05D006333 ORTHO05D007799 4.3e-77 292.0 238 64.3
Eucgr.J00870 Eucalyptus grandis HOM05D006333 ORTHO05D007799 8.2e-76 287.7 230 67.0
Lalb_Chr01g0001411 Lupinus albus HOM05D006333 ORTHO05D007799 2.0e-74 283.1 238 62.6
Os10g0486000 Oryza sativa ssp. japonica HOM05D006333 ORTHO05D007799 1.7e-73 280.0 240 62.9
AUR62032988 Chenopodium quinoa HOM05D006333 ORTHO05D007799 3.8e-73 278.9 226 65.0
Ah.01g001500 Amaranthus hybridus HOM05D006333 ORTHO05D007799 6.5e-73 278.1 197 72.1
Actinidia11766 Actinidia chinensis HOM05D006333 ORTHO05D007799 1.4e-72 276.9 247 64.4
arahy.Tifrunner.gnm1.ann1.N7V6FU Arachis hypogaea HOM05D006333 ORTHO05D007799 4.6e-71 271.9 265 58.9
arahy.Tifrunner.gnm1.ann1.A0JP3J Arachis hypogaea HOM05D006333 ORTHO05D007799 6.1e-71 271.6 249 61.0
HPP92_008575 Vanilla planifolia HOM05D006333 ORTHO05D007799 7.9e-71 271.2 244 61.5
SalBow7G0482 Salvia bowleyana HOM05D006333 ORTHO05D007799 1.4e-67 260.4 273 57.9
TAR629G0175 Trochodendron aralioides HOM05D006333 ORTHO05D007799 5.1e-62 241.9 153 79.7
CDE02G3779 Ceratophyllum demersum HOM05D006333 ORTHO05D007799 3.1e-59 232.6 227 58.1
Cpa.g.sc0.135 Carica papaya HOM05D006333 ORTHO05D007799 4.1e-59 232.3 154 74.0
Haze_11767 Corylus avellana HOM05D006333 ORTHO05D007799 6.9e-59 231.5 227 60.8
SMO116G0442 Selaginella moellendorffii HOM05D006333 ORTHO05D007799 6.9e-59 231.5 240 54.6
SGA_v2.0_scaffold173G39125 Striga asiatica HOM05D006333 ORTHO05D007799 2.6e-58 229.6 160 71.2
vmacro16037 Vaccinium macrocarpon HOM05D006333 ORTHO05D007799 2.6e-53 213.0 314 44.3
Pp3c7_23360 Physcomitrium patens HOM05D006333 ORTHO05D007799 4.8e-52 208.8 233 50.6
Cre05.g234647 Chlamydomonas reinhardtii HOM05D006333 ORTHO05D007799 7.7e-50 201.4 243 49.0
Zm00001eb045350 Zea mays HOM05D006333 ORTHO05D007799 3.2e-48 196.1 143 67.1
Actinidia13050 Actinidia chinensis HOM05D006333 ORTHO05D007799 4.7e-47 192.2 220 54.1
MCO07G572 Micromonas commoda HOM05D006333 ORTHO05D007799 3.7e-44 182.6 237 46.0
Mapoly0006s0058 Marchantia polymorpha HOM05D006333 ORTHO05D007799 1.0e-38 164.5 150 56.0
PRCOL_00000482 Prasinoderma coloniale HOM05D006333 ORTHO05D007799 1.2e-37 161.0 236 42.8
QL03p044200 Quercus lobata HOM05D006333 ORTHO05D007799 8.3e-36 154.8 85 87.1
SalBow1G5083 Salvia bowleyana HOM05D006333 ORTHO05D007799 7.0e-35 151.8 104 74.0
CBR_g5629 Chara braunii HOM05D006333 ORTHO05D007799 3.2e-32 142.9 402 31.3
Ah.05g173900 Amaranthus hybridus HOM05D006333 ORTHO05D007799 4.8e-28 129.0 84 71.4
Thecc.08G107200 Theobroma cacao HOM05D006333 ORTHO05D007799 1.0e-22 111.3 70 75.7
Aa31sc968G10 Aethionema arabicum HOM05D006333 ORTHO05D007799 4.4e-21 105.9 159 45.3
QL03p044193 Quercus lobata HOM05D006333 ORTHO05D007799 2.8e-20 103.2 98 56.1
Haze_06289 Corylus avellana HOM05D006333 ORTHO05D007799 5.4e-19 99.0 51 92.2
Haze_18642 Corylus avellana HOM05D006333 ORTHO05D007799 7.8e-18 95.1 70 71.4
Cpa.g.sc0.136 Carica papaya HOM05D006333 ORTHO05D007799 2.9e-17 93.2 85 63.5
Oeu044913.1 Olea europaea HOM05D006333 ORTHO05D007799 1.2e-15 87.8 85 63.5
SalBow1G0042 Salvia bowleyana HOM05D006333 ORTHO05D007799 1.0e-14 84.7 86 58.1
TAR629G1621 Trochodendron aralioides HOM05D006333 ORTHO05D007799 1.8e-14 84.0 55 80.0
MBI06_g42292_MAGBIO Magnolia biondii HOM05D006333 ORTHO05D007799 1.9e-11 73.9 70 61.4
Cfa024705 Carpinus fangiana HOM05D006333 ORTHO05D007799 2.7e-10 70.1 208 29.3
Aa31LG4G11880 Aethionema arabicum HOM05D006333 ORTHO05D007799 4.6e-10 69.3 56 67.9
Cfa023716 Carpinus fangiana HOM05D006333 ORTHO05D007799 6.0e-10 68.9 101 42.6
Aa31sc286G50 Aethionema arabicum HOM05D006333 ORTHO05D007799 8.6e-09 65.1 45 75.6


User provided reference genes

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