Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv17599 Davidia involucrata HOM05D006938 ORTHO05D008600 5.0e-120 434.5 225 100.0
TAR629G2816 Trochodendron aralioides HOM05D006938 ORTHO05D008600 6.0e-65 251.5 179 73.7
Actinidia11174 Actinidia chinensis HOM05D006938 ORTHO05D008600 1.6e-62 243.4 226 61.9
CSS0018133 Camellia sinensis var. sinensis HOM05D006938 ORTHO05D008600 2.8e-62 242.7 233 63.1
Lj6P721T41 Lonicera japonica HOM05D006938 ORTHO05D008600 1.4e-61 240.4 176 71.6
vmacro22268 Vaccinium macrocarpon HOM05D006938 ORTHO05D008600 3.1e-61 239.2 196 66.8
Potri.002G062100 Populus trichocarpa HOM05D006938 ORTHO05D008600 5.4e-58 228.4 179 67.0
QL03p043666 Quercus lobata HOM05D006938 ORTHO05D008600 5.4e-58 228.4 181 69.6
Sabra02G0050200 Salix brachista HOM05D006938 ORTHO05D008600 7.1e-58 228.0 178 66.9
Hma1.2p1_0232F.1_g097690 Hydrangea macrophylla HOM05D006938 ORTHO05D008600 2.7e-57 226.1 192 67.2
CiPaw.09G164200 Carya illinoinensis HOM05D006938 ORTHO05D008600 7.9e-57 224.6 148 79.1
Potri.005G199000 Populus trichocarpa HOM05D006938 ORTHO05D008600 7.9e-57 224.6 197 60.4
Duzib084G0622 Durio zibethinus HOM05D006938 ORTHO05D008600 1.7e-56 223.4 178 65.7
Prupe.1G345500 Prunus persica HOM05D006938 ORTHO05D008600 3.0e-56 222.6 193 63.7
DCAR_023442 Daucus carota HOM05D007059 ORTHO05D008600 5.6e-55 218.4 172 69.2
Peaxi162Scf00363g00087 Petunia axillaris HOM05D006938 ORTHO05D008600 5.6e-55 218.4 174 63.8
RcHm_v2.0_Chr4g0446461 Rosa chinensis HOM05D006938 ORTHO05D008600 2.8e-54 216.1 194 62.9
Aqoxy3G04277 Aquilegia oxysepala HOM05D006938 ORTHO05D008600 2.4e-53 213.0 175 65.1
CAN.G157.8 Capsicum annuum HOM05D006938 ORTHO05D008600 2.4e-53 213.0 177 65.5
Cc07_g19080 Coffea canephora HOM05D006938 ORTHO05D008600 2.4e-53 213.0 197 60.9
Haze_11723 Corylus avellana HOM05D006938 ORTHO05D008600 6.9e-53 211.5 180 66.1
Nitab4.5_0002392g0050 Nicotiana tabacum HOM05D006938 ORTHO05D008600 9.0e-53 211.1 172 64.5
Thecc.03G060300 Theobroma cacao HOM05D006938 ORTHO05D008600 9.0e-53 211.1 178 61.8
TWI53G1636 Tripterygium wilfordii HOM05D006938 ORTHO05D008600 1.2e-52 210.7 171 63.7
vmacro22787 Vaccinium macrocarpon HOM05D006938 ORTHO05D008600 1.2e-52 210.7 207 61.4
GSVIVG01010180001 Vitis vinifera HOM05D006938 ORTHO05D008600 1.5e-52 210.3 222 55.0
Nitab4.5_0000139g0080 Nicotiana tabacum HOM05D006938 ORTHO05D008600 3.4e-52 209.1 172 64.0
Manes.10G035800 Manihot esculenta HOM05D006938 ORTHO05D008600 7.6e-52 208.0 175 62.9
Eucgr.G00991 Eucalyptus grandis HOM05D006938 ORTHO05D008600 2.2e-51 206.5 162 64.8
FAN17G2681 Fragaria x ananassa HOM05D006938 ORTHO05D008600 2.9e-51 206.1 188 62.8
Glyma.10G219400 Glycine max HOM05D006938 ORTHO05D008600 3.8e-51 205.7 122 85.2
FvH4_4g36740 Fragaria vesca HOM05D006938 ORTHO05D008600 4.9e-51 205.3 143 75.5
FAN12G4276 Fragaria x ananassa HOM05D006938 ORTHO05D008600 4.9e-51 205.3 143 75.5
Cfa008713 Carpinus fangiana HOM05D006938 ORTHO05D008600 6.4e-51 204.9 147 72.8
Glyma.20G172300 Glycine max HOM05D006938 ORTHO05D008600 6.4e-51 204.9 122 84.4
Phvul.007G086000 Phaseolus vulgaris HOM05D006938 ORTHO05D008600 1.1e-50 204.1 185 63.2
Hund24283 Selenicereus undatus HOM05D006938 ORTHO05D008600 1.1e-50 204.1 180 63.3
CANSAT64G2234 Cannabis sativa HOM05D006938 ORTHO05D008600 1.4e-50 203.8 168 63.1
arahy.Tifrunner.gnm1.ann1.ZPRB1V Arachis hypogaea HOM05D006938 ORTHO05D008600 1.9e-50 203.4 179 63.7
Ciclev10032755m.g Citrus clementina HOM05D006938 ORTHO05D008600 2.4e-50 203.0 178 58.4
Atru.chr11.1233 Acer truncatum HOM05D006938 ORTHO05D008600 3.2e-50 202.6 180 57.8
Atru.chr11.1321 Acer truncatum HOM05D006938 ORTHO05D008600 3.2e-50 202.6 180 57.8
Medtr1g097270 Medicago truncatula HOM05D006938 ORTHO05D008600 3.2e-50 202.6 182 62.1
PGSC0003DMG400019837 Solanum tuberosum HOM05D006938 ORTHO05D008600 5.5e-50 201.8 140 73.6
MBI06_g36504_MAGBIO Magnolia biondii HOM05D006938 ORTHO05D008600 1.2e-49 200.7 175 64.0
MD13G1007500 Malus domestica HOM05D006938 ORTHO05D008600 1.6e-49 200.3 182 60.4
AUR62015206 Chenopodium quinoa HOM05D006938 ORTHO05D008600 2.7e-49 199.5 179 61.5
AUR62017669 Chenopodium quinoa HOM05D006938 ORTHO05D008600 4.6e-49 198.7 210 54.3
Lj5g0002504 Lotus japonicus HOM05D006938 ORTHO05D008600 4.6e-49 198.7 196 59.7
SGA_v2.0_scaffold25G10864 Striga asiatica HOM05D006938 ORTHO05D008600 7.9e-49 198.0 148 73.0
TPR.G23154 Trifolium pratense HOM05D006938 ORTHO05D008600 7.9e-49 198.0 189 58.7
PSO478G3769 Papaver somniferum HOM05D006938 ORTHO05D008600 1.0e-48 197.6 191 60.7
Psat6g189200 Pisum sativum HOM05D006938 ORTHO05D008600 1.0e-48 197.6 179 60.3
PGR142G2203 Punica granatum HOM05D006938 ORTHO05D008600 2.3e-48 196.4 172 64.5
Ah.01g012920 Amaranthus hybridus HOM05D006938 ORTHO05D008600 3.0e-48 196.1 165 66.1
PSO017G4971 Papaver somniferum HOM05D006938 ORTHO05D008600 5.1e-48 195.3 210 59.0
Ca_10639_v3 Cicer arietinum L. HOM05D006938 ORTHO05D008600 2.5e-47 193.0 182 58.8
Gorai.007G003100 Gossypium raimondii HOM05D006938 ORTHO05D008600 2.5e-47 193.0 207 56.0
Hma1.2p1_0499F.1_g166850 Hydrangea macrophylla HOM05D006938 ORTHO05D008600 2.5e-47 193.0 120 78.3
MD16G1000600 Malus domestica HOM05D006938 ORTHO05D008600 3.3e-47 192.6 179 59.8
Nn4g24932 Nelumbo nucifera HOM05D006938 ORTHO05D008600 7.4e-47 191.4 179 59.8
Rhsim06G0126000 Rhododendron simsii HOM05D006938 ORTHO05D008600 1.3e-46 190.7 117 82.9
HanXRQChr17g0540771 Helianthus annuus HOM05D006938 ORTHO05D008600 2.1e-46 189.9 188 59.6
Oeu024662.1 Olea europaea HOM05D006938 ORTHO05D008600 2.1e-46 189.9 117 80.3
Sed0026401 Sechium edule HOM05D006938 ORTHO05D008600 2.8e-46 189.5 173 59.5
Cpa.g.sc51.44 Carica papaya HOM05D006938 ORTHO05D008600 4.8e-46 188.7 179 56.4
ClCG09G005720 Citrullus lanatus HOM05D006938 ORTHO05D008600 4.8e-46 188.7 145 68.3
Lalb_Chr03g0035761 Lupinus albus HOM05D006938 ORTHO05D008600 6.2e-46 188.3 122 77.9
Sc20g0002200 Simmondsia chinensis HOM05D006938 ORTHO05D008600 8.1e-46 188.0 120 80.0
CsaV3_7G029440 Cucumis sativus L. HOM05D006938 ORTHO05D008600 1.1e-45 187.6 133 69.9
Gohir.A11G002500 Gossypium hirsutum HOM05D006938 ORTHO05D008600 1.1e-45 187.6 199 56.8
Gohir.D11G002100 Gossypium hirsutum HOM05D006938 ORTHO05D008600 1.1e-45 187.6 199 56.8
MELO3C015984.2 Cucumis melo HOM05D006938 ORTHO05D008600 1.4e-45 187.2 133 69.9
SGA_v2.0_scaffold467G52037 Striga asiatica HOM05D006938 ORTHO05D008600 3.1e-45 186.0 109 85.3
ATR0618G369 Amborella trichopoda HOM05D006938 ORTHO05D008600 5.3e-45 185.3 104 86.5
Sopen02g005300 Solanum pennellii HOM05D006938 ORTHO05D008600 6.9e-45 184.9 134 72.4
ECA246G5327 Erigeron canadensis HOM05D006938 ORTHO05D008600 1.5e-44 183.7 118 78.8
Solyc02g021000.3 Solanum lycopersicum HOM05D006938 ORTHO05D008600 1.5e-44 183.7 134 72.4
AT5G36120 Arabidopsis thaliana HOM05D006938 ORTHO05D008600 2.0e-44 183.3 149 64.4
AL7G45100 Arabidopsis lyrata HOM05D006938 ORTHO05D008600 1.0e-43 181.0 150 63.3
Lsat_1_v5_gn_3_33800 Lactuca sativa HOM05D006938 ORTHO05D008600 1.7e-43 180.3 108 85.2
BcaC08g44319 Brassica carinata HOM05D006938 ORTHO05D008600 8.4e-43 177.9 196 54.1
C06p17420 Brassica napus HOM05D006938 ORTHO05D008600 8.4e-43 177.9 196 54.1
BolC6t36937H Brassica oleracea HOM05D006938 ORTHO05D008600 8.4e-43 177.9 196 54.1
RcHm_v2.0_Chr3g0449681 Rosa chinensis HOM05D006938 ORTHO05D008600 8.4e-43 177.9 100 86.0
A05p16420 Brassica napus HOM05D006938 ORTHO05D008600 1.1e-42 177.6 114 76.3
Thhalv10005006m.g Eutrema salsugineum HOM05D006938 ORTHO05D008600 1.1e-42 177.6 154 61.7
Oeu022179.1 Olea europaea HOM05D006938 ORTHO05D008600 1.4e-42 177.2 102 86.3
Sp7g06080 Schrenkiella parvula HOM05D006938 ORTHO05D008600 1.4e-42 177.2 114 75.4
BcaB02g08043 Brassica carinata HOM05D006938 ORTHO05D008600 1.9e-42 176.8 114 76.3
Migut.I00065 Erythranthe guttata HOM05D006938 ORTHO05D008600 3.2e-42 176.0 103 83.5
Sc10g0007070 Simmondsia chinensis HOM05D006938 ORTHO05D008600 4.2e-42 175.6 113 80.5
HPP92_002538 Vanilla planifolia HOM05D006938 ORTHO05D008600 7.1e-42 174.9 119 72.3
THA.LOC104805738 Tarenaya hassleriana HOM05D006938 ORTHO05D008600 9.3e-42 174.5 182 55.5
HPP92_002496 Vanilla planifolia HOM05D006938 ORTHO05D008600 9.3e-42 174.5 119 72.3
BraA05t20549Z Brassica rapa HOM05D006938 ORTHO05D008600 1.2e-41 174.1 115 75.7
Carub.0007s3179 Capsella rubella HOM05D006938 ORTHO05D008600 2.7e-41 172.9 115 73.9
Manes.07G111600 Manihot esculenta HOM05D006938 ORTHO05D008600 3.0e-40 169.5 197 52.8
Aa31LG9G17890 Aethionema arabicum HOM05D006938 ORTHO05D008600 1.1e-39 167.5 117 70.9
Os01g0966200 Oryza sativa ssp. japonica HOM05D006938 ORTHO05D008600 3.7e-38 162.5 102 79.4
Zm00001eb362370 Zea mays HOM05D006938 ORTHO05D008600 6.3e-38 161.8 102 78.4
Mapoly0101s0070 Marchantia polymorpha HOM05D006938 ORTHO05D008600 5.3e-37 158.7 169 54.4
Pp3c10_19880 Physcomitrium patens HOM05D006938 ORTHO05D008600 1.9e-34 150.2 118 63.6
AagrBONN_evm.TU.Sc2ySwM_344.2773 Anthoceros agrestis HOM05D006938 ORTHO05D008600 1.2e-33 147.5 111 64.0
SEGI_34816 Sequoiadendron giganteum HOM05D006938 ORTHO05D008600 2.1e-33 146.7 103 68.0
CDE07G1356 Ceratophyllum demersum HOM05D002851 ORTHO05D003084 1.5e-31 140.6 88 78.4
Peaxi162Scf00818g00021 Petunia axillaris HOM05D006938 ORTHO05D008600 1.1e-29 134.4 176 47.2
MBI06_g34033_MAGBIO Magnolia biondii HOM05D006938 ORTHO05D008600 5.3e-29 132.1 74 86.5
MCO16G496 Micromonas commoda HOM05D006938 ORTHO05D008600 2.0e-28 130.2 98 61.2
unitig_21.g20451 Utricularia gibba HOM05D006938 ORTHO05D008600 3.8e-27 125.9 71 85.9
Cre01.g052400 Chlamydomonas reinhardtii HOM05D006938 ORTHO05D008600 8.5e-19 98.2 93 51.6
CDE06G1837 Ceratophyllum demersum HOM05D006938 ORTHO05D008600 1.6e-17 94.0 56 82.1
CsaV3_4G025230 Cucumis sativus L. HOM05D006938 ORTHO05D008600 6.1e-17 92.0 62 75.8
PRCOL_00002779 Prasinoderma coloniale HOM05D006938 ORTHO05D008600 6.1e-17 92.0 74 59.5
EL10Ac9g22924 Beta vulgaris HOM05D006938 ORTHO05D008600 1.4e-16 90.9 44 90.9
Sc10g0007050 Simmondsia chinensis HOM05D006938 ORTHO05D008600 2.4e-13 80.1 70 58.6
Migut.I00066 Erythranthe guttata HOM05D006938 ORTHO05D008600 9.4e-10 68.2 44 70.5


User provided reference genes

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