Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv17591 Davidia involucrata HOM05D005688 ORTHO05D006630 5.3e-198 694.1 339 100.0
Dinv11693 Davidia involucrata HOM05D005688 ORTHO05D006630 2.9e-180 635.2 340 90.6
Hma1.2p1_0065F.1_g035040 Hydrangea macrophylla HOM05D005688 ORTHO05D006630 6.9e-174 614.0 344 87.2
CSS0038243 Camellia sinensis var. sinensis HOM05D005688 ORTHO05D006630 3.8e-164 581.6 345 83.2
Actinidia09624 Actinidia chinensis HOM05D005688 ORTHO05D006630 3.2e-163 578.6 342 83.0
Lj6A830T28 Lonicera japonica HOM05D005688 ORTHO05D006630 4.7e-162 574.7 344 83.7
CSS0036763 Camellia sinensis var. sinensis HOM05D005688 ORTHO05D006630 1.0e-161 573.5 344 84.0
TAR629G3099 Trochodendron aralioides HOM05D005688 ORTHO05D006630 4.8e-159 564.7 346 80.9
Lsat_1_v5_gn_4_280 Lactuca sativa HOM05D005688 ORTHO05D006630 9.1e-158 560.5 353 79.3
Haze_12451 Corylus avellana HOM05D005688 ORTHO05D006630 1.4e-153 546.6 350 78.6
Nitab4.5_0002277g0010 Nicotiana tabacum HOM05D005688 ORTHO05D006630 1.4e-153 546.6 351 77.5
Nitab4.5_0000251g0050 Nicotiana tabacum HOM05D005688 ORTHO05D006630 2.6e-152 542.3 353 76.5
Cfa009390 Carpinus fangiana HOM05D005688 ORTHO05D006630 3.3e-152 542.0 350 77.7
Rhsim12G0023600 Rhododendron simsii HOM05D005688 ORTHO05D006630 4.4e-152 541.6 351 77.5
HanXRQChr17g0568911 Helianthus annuus HOM05D005688 ORTHO05D006630 4.8e-151 538.1 342 78.1
Phvul.008G017000 Phaseolus vulgaris HOM05D005688 ORTHO05D006630 4.8e-151 538.1 357 76.5
Sopen05g011970 Solanum pennellii HOM05D005688 ORTHO05D006630 4.8e-151 538.1 348 77.0
PGSC0003DMG400010801 Solanum tuberosum HOM05D005688 ORTHO05D006630 4.8e-151 538.1 348 77.0
Solyc05g015980.3 Solanum lycopersicum HOM05D005688 ORTHO05D006630 2.4e-150 535.8 348 76.7
ECA234G1377 Erigeron canadensis HOM05D005688 ORTHO05D006630 4.1e-150 535.0 340 77.6
Manes.12G008200 Manihot esculenta HOM05D005688 ORTHO05D006630 4.1e-150 535.0 353 76.5
TAR371G0171 Trochodendron aralioides HOM05D005688 ORTHO05D006630 5.3e-150 534.6 346 77.7
Actinidia39795 Actinidia chinensis HOM05D005688 ORTHO05D006630 7.0e-150 534.3 321 82.6
Potri.001G059700 Populus trichocarpa HOM05D005688 ORTHO05D006630 4.5e-149 531.6 349 76.5
MSTRG.481 Avicennia marina HOM05D005688 ORTHO05D006630 7.7e-149 530.8 336 77.1
Lalb_Chr10g0092021 Lupinus albus HOM05D005688 ORTHO05D006630 3.8e-148 528.5 359 74.7
Prupe.1G222300 Prunus persica HOM05D005688 ORTHO05D006630 5.0e-148 528.1 358 73.2
Migut.E00005 Erythranthe guttata HOM05D005688 ORTHO05D006630 2.5e-147 525.8 343 74.9
Gohir.A04G100300 Gossypium hirsutum HOM05D005688 ORTHO05D006630 2.5e-147 525.8 349 74.2
Duzib251G0174 Durio zibethinus HOM05D005688 ORTHO05D006630 3.2e-147 525.4 347 73.8
FAN07G0693 Fragaria x ananassa HOM05D005688 ORTHO05D006630 3.2e-147 525.4 356 73.3
MD16G1123300 Malus domestica HOM05D005688 ORTHO05D006630 5.5e-147 524.6 356 74.7
Gohir.D04G139300 Gossypium hirsutum HOM05D005688 ORTHO05D006630 7.2e-147 524.2 349 74.2
TWI75G1512 Tripterygium wilfordii HOM05D005688 ORTHO05D006630 7.2e-147 524.2 352 74.7
SalBow2G0527 Salvia bowleyana HOM05D005688 ORTHO05D006630 9.4e-147 523.9 336 76.2
Gorai.012G124400 Gossypium raimondii HOM05D005688 ORTHO05D006630 1.2e-146 523.5 349 74.5
Potri.003G168300 Populus trichocarpa HOM05D005688 ORTHO05D006630 2.1e-146 522.7 348 77.3
Thecc.02G201300 Theobroma cacao HOM05D005688 ORTHO05D006630 2.1e-146 522.7 352 73.9
vmacro01046 Vaccinium macrocarpon HOM05D005688 ORTHO05D006630 2.1e-146 522.7 367 72.5
CANSAT80G0816 Cannabis sativa HOM05D005688 ORTHO05D006630 3.6e-146 521.9 350 75.4
Ca_07133_v3 Cicer arietinum L. HOM05D005688 ORTHO05D006630 3.6e-146 521.9 360 75.6
Ca_28122_v3 Cicer arietinum L. HOM05D005688 ORTHO05D006630 3.6e-146 521.9 360 75.6
FvH4_4g23370 Fragaria vesca HOM05D005688 ORTHO05D006630 4.7e-146 521.5 355 73.2
FAN12G1631 Fragaria x ananassa HOM05D005688 ORTHO05D006630 4.7e-146 521.5 355 73.2
FAN17G3098 Fragaria x ananassa HOM05D005688 ORTHO05D006630 6.1e-146 521.2 356 72.8
Glyma.18G284500 Glycine max HOM05D005688 ORTHO05D006630 4.0e-145 518.5 361 74.8
MELO3C017746.2 Cucumis melo HOM05D005688 ORTHO05D006630 6.8e-145 517.7 358 72.9
Sc04g0010310 Simmondsia chinensis HOM05D005688 ORTHO05D006630 1.2e-144 516.9 348 74.7
DCAR_024659 Daucus carota HOM05D005688 ORTHO05D006630 1.5e-144 516.5 340 76.5
RcHm_v2.0_Chr4g0429761 Rosa chinensis HOM05D005688 ORTHO05D006630 2.6e-144 515.8 355 73.8
Lalb_Chr17g0336391 Lupinus albus HOM05D005688 ORTHO05D006630 4.4e-144 515.0 354 74.6
CiPaw.05G106800 Carya illinoinensis HOM05D005688 ORTHO05D006630 7.5e-144 514.2 354 74.9
QL03p051598 Quercus lobata HOM05D005688 ORTHO05D006630 1.3e-143 513.5 367 71.9
Glyma.02G097000 Glycine max HOM05D005688 ORTHO05D006630 2.2e-143 512.7 363 74.1
CsaV3_4G002970 Cucumis sativus L. HOM05D005688 ORTHO05D006630 4.8e-143 511.5 360 71.9
Ciclev10032000m.g Citrus clementina HOM05D005688 ORTHO05D006630 8.3e-143 510.8 352 72.2
Nn3g16394 Nelumbo nucifera HOM05D005688 ORTHO05D006630 8.3e-143 510.8 346 74.6
TWI36G1544 Tripterygium wilfordii HOM05D005688 ORTHO05D006630 8.3e-143 510.8 352 73.3
PGR102G0765 Punica granatum HOM05D005688 ORTHO05D006630 4.1e-142 508.4 349 72.8
BolC9t59237H Brassica oleracea HOM05D005688 ORTHO05D006630 5.4e-142 508.1 357 69.5
Medtr7g022390 Medicago truncatula HOM05D005688 ORTHO05D006630 7.0e-142 507.7 360 73.6
Sed0014060 Sechium edule HOM05D005688 ORTHO05D006630 9.1e-142 507.3 358 72.3
BraA03t09920Z Brassica rapa HOM05D000918 ORTHO05D006630 1.6e-141 506.5 358 69.6
Duzib248G1308 Durio zibethinus HOM05D005688 ORTHO05D006630 2.0e-141 506.1 352 72.4
arahy.Tifrunner.gnm1.ann1.97E8EB Arachis hypogaea HOM05D005688 ORTHO05D006630 2.7e-141 505.8 374 70.3
arahy.Tifrunner.gnm1.ann1.N9VQT0 Arachis hypogaea HOM05D005688 ORTHO05D006630 2.7e-141 505.8 374 70.3
A03p05810 Brassica napus HOM05D000918 ORTHO05D000791 7.7e-141 504.2 358 69.3
C03p06760 Brassica napus HOM05D000918 ORTHO05D006630 1.7e-140 503.1 358 69.0
BolC3t13183H Brassica oleracea HOM05D000918 ORTHO05D006630 1.7e-140 503.1 358 69.0
Lj1g0000862 Lotus japonicus HOM05D005688 ORTHO05D006630 1.7e-140 503.1 367 70.6
C09p63990 Brassica napus HOM05D000918 ORTHO05D006630 2.9e-140 502.3 351 69.2
Thhalv10013944m.g Eutrema salsugineum HOM05D005688 ORTHO05D006630 2.9e-140 502.3 359 70.2
CARHR200370 Cardamine hirsuta HOM05D005688 ORTHO05D006630 3.8e-140 501.9 358 70.4
BraA10t44572Z Brassica rapa HOM05D005688 ORTHO05D006630 1.1e-139 500.4 359 68.5
Peaxi162Scf00128g01523 Petunia axillaris HOM05D005688 ORTHO05D006630 1.1e-139 500.4 354 72.9
Sp6g30880 Schrenkiella parvula HOM05D005688 ORTHO05D006630 1.5e-139 500.0 361 68.7
AL6G23700 Arabidopsis lyrata HOM05D005688 ORTHO05D006630 1.9e-139 499.6 358 70.1
Aa31LG3G14570 Aethionema arabicum HOM05D005688 ORTHO05D006630 2.5e-139 499.2 356 70.2
Carub.0006s1127 Capsella rubella HOM05D005688 ORTHO05D006630 3.3e-139 498.8 357 69.5
Hund06107 Selenicereus undatus HOM05D005688 ORTHO05D006630 4.2e-139 498.4 348 72.1
A10p25100 Brassica napus HOM05D000918 ORTHO05D006630 2.1e-138 496.1 355 67.6
THA.LOC104810209 Tarenaya hassleriana HOM05D005688 ORTHO05D006630 2.1e-138 496.1 352 69.6
AT5G13100 Arabidopsis thaliana HOM05D005688 ORTHO05D006630 1.4e-137 493.4 358 69.6
COL.COLO4_27347 Corchorus olitorius HOM05D005688 ORTHO05D006630 5.2e-137 491.5 354 73.4
unitig_26.g10416 Utricularia gibba HOM05D005688 ORTHO05D006630 5.2e-137 491.5 342 72.8
TPR.G2946 Trifolium pratense HOM05D005688 ORTHO05D006630 1.2e-136 490.3 346 74.0
CAN.G163.3 Capsicum annuum HOM05D005688 ORTHO05D006630 4.4e-136 488.4 322 75.8
Aqoxy3G01629 Aquilegia oxysepala HOM05D005688 ORTHO05D006630 5.7e-136 488.0 349 71.6
Sabra03G0123400 Salix brachista HOM05D005688 ORTHO05D006630 2.8e-135 485.7 436 61.2
MBI07_g18747_MAGBIO Magnolia biondii HOM05D005688 ORTHO05D006630 1.1e-134 483.8 349 71.6
EL10Ac6g13540 Beta vulgaris HOM05D005688 ORTHO05D006630 4.5e-133 478.4 355 69.0
AUR62028899 Chenopodium quinoa HOM05D005688 ORTHO05D006630 4.5e-133 478.4 352 69.3
Eucgr.B03525 Eucalyptus grandis HOM05D005688 ORTHO05D006630 3.8e-132 475.3 356 68.3
CDE05G3530 Ceratophyllum demersum HOM05D005688 ORTHO05D006630 1.2e-130 470.3 346 67.3
BcaB01g05377 Brassica carinata HOM05D005688 ORTHO05D006630 2.8e-130 469.2 359 65.5
ClCG07G015390 Citrullus lanatus HOM05D005688 ORTHO05D006630 4.7e-130 468.4 325 73.2
CDE05G2516 Ceratophyllum demersum HOM05D005688 ORTHO05D006630 6.8e-129 464.5 346 66.8
Sabra01G0042800 Salix brachista HOM05D005688 ORTHO05D006630 4.9e-127 458.4 318 76.7
Psat3g187080 Pisum sativum HOM05D005688 ORTHO05D006630 1.9e-126 456.4 325 72.9
Sed0011472 Sechium edule HOM05D005688 ORTHO05D006630 1.0e-124 450.7 322 70.8
PSO478G0501 Papaver somniferum HOM05D005688 ORTHO05D006630 5.0e-124 448.4 365 65.5
PSO017G1106 Papaver somniferum HOM05D005688 ORTHO05D006630 1.5e-123 446.8 362 65.5
Ah.03g135940 Amaranthus hybridus HOM05D005688 ORTHO05D006630 5.6e-123 444.9 361 65.1
ATR0582G145 Amborella trichopoda HOM05D005688 ORTHO05D006630 2.1e-122 443.0 343 65.6
Os01g0102500 Oryza sativa ssp. japonica HOM05D005688 ORTHO05D006630 1.2e-117 427.2 339 62.2
Zm00001eb127020 Zea mays HOM05D005688 ORTHO05D006630 1.0e-116 424.1 356 59.0
Ah.02g130750 Amaranthus hybridus HOM05D005688 ORTHO05D006630 1.2e-114 417.2 347 61.4
SEGI_34677 Sequoiadendron giganteum HOM05D005688 ORTHO05D006630 1.1e-113 414.1 297 67.7
CiPaw.06G105500 Carya illinoinensis HOM05D005688 ORTHO05D006630 2.6e-112 409.5 282 73.8
SEGI_28374 Sequoiadendron giganteum HOM05D005688 ORTHO05D006630 5.8e-112 408.3 307 65.5
HPP92_011533 Vanilla planifolia HOM05D005688 ORTHO05D006630 7.8e-109 397.9 316 64.2
Manes.13G008600 Manihot esculenta HOM05D005688 ORTHO05D006630 1.2e-106 390.6 281 71.9
Atru.chr11.2370 Acer truncatum HOM05D005688 ORTHO05D006630 2.1e-106 389.8 286 69.9
AUR62005654 Chenopodium quinoa HOM05D005688 ORTHO05D006630 2.6e-104 382.9 233 79.8
HPP92_011539 Vanilla planifolia HOM05D005688 ORTHO05D006630 3.2e-102 375.9 346 57.2
Cpa.g.sc99.54 Carica papaya HOM05D005688 ORTHO05D006630 7.1e-102 374.8 194 91.2
MBI04_g07882_MAGBIO Magnolia biondii HOM05D005688 ORTHO05D006630 1.2e-101 374.0 310 58.7
Cc11_g17240 Coffea canephora HOM05D005688 ORTHO05D006630 1.6e-101 373.6 194 90.2
AagrBONN_evm.TU.Sc2ySwM_340.298 Anthoceros agrestis HOM05D005688 ORTHO05D006630 4.6e-101 372.1 304 59.9
GSVIVG01000906001 Vitis vinifera HOM05D005688 ORTHO05D006630 5.1e-100 368.6 194 89.7
ATR0579G080 Amborella trichopoda HOM05D005688 ORTHO05D006630 7.3e-99 364.8 301 58.8
BcaC04g19152 Brassica carinata HOM05D005688 ORTHO05D006630 8.1e-98 361.3 357 54.6
CBR_g40425 Chara braunii HOM05D005688 ORTHO05D006630 2.4e-97 359.8 284 62.7
Mapoly0015s0197 Marchantia polymorpha HOM05D005688 ORTHO05D006630 2.4e-97 359.8 301 60.5
SMO367G0614 Selaginella moellendorffii HOM05D005688 ORTHO05D006630 7.8e-93 344.7 298 55.0
unitig_8.g2899 Utricularia gibba HOM05D005688 ORTHO05D006630 2.2e-71 273.5 153 83.7
Actinidia30626 Actinidia chinensis HOM05D001095 ORTHO05D000976 1.9e-67 260.4 210 65.2
Actinidia08051 Actinidia chinensis HOM05D005688 ORTHO05D006630 2.2e-63 246.9 126 90.5
Oeu012651.1 Olea europaea HOM05D005688 ORTHO05D006630 4.8e-58 229.2 198 57.6
unitig_8.g2900 Utricularia gibba HOM05D005688 ORTHO05D006630 1.5e-51 207.6 174 62.1
Actinidia34019 Actinidia chinensis HOM05D005688 ORTHO05D006630 1.1e-49 201.4 327 41.3
Nn4g22254 Nelumbo nucifera HOM05D005688 ORTHO05D006630 3.8e-47 193.0 100 89.0
Actinidia08052 Actinidia chinensis HOM05D005688 ORTHO05D006630 4.1e-41 172.9 148 59.5
Cpa.g.sc99.53 Carica papaya HOM05D005688 ORTHO05D006630 1.2e-37 161.4 133 60.9
GSVIVG01010535001 Vitis vinifera HOM05D005688 ORTHO05D006630 1.3e-34 151.4 101 78.2
Aqoxy1G03766 Aquilegia oxysepala HOM05D005688 ORTHO05D006630 7.7e-32 142.1 151 56.3
VMungo1215G2942 Vigna mungo HOM05D005688 ORTHO05D006630 1.7e-31 141.0 91 73.6
VMungo1383G3355 Vigna mungo HOM05D005688 ORTHO05D006630 4.2e-30 136.3 226 42.0
BcaB03g14943 Brassica carinata HOM05D005688 ORTHO05D006630 1.8e-28 131.0 73 79.5
BcaB07g33260 Brassica carinata HOM05D005688 ORTHO05D006630 3.0e-28 130.2 73 79.5
Ah.02g130760 Amaranthus hybridus HOM05D005688 ORTHO05D006630 2.8e-18 97.1 121 45.5
QL06p005212 Quercus lobata HOM05D005688 ORTHO05D006630 2.8e-13 80.5 43 83.7
Actinidia05457 Actinidia chinensis HOM05D005688 ORTHO05D054920 1.4e-09 68.2 70 57.1


User provided reference genes

Program Settings