Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv17584 Davidia involucrata HOM05D005577 ORTHO05D006941 9.5e-175 616.7 302 100.0
Dinv11687 Davidia involucrata HOM05D005577 ORTHO05D006941 3.4e-55 219.5 399 39.3
Cpa.g.sc43.82 Carica papaya HOM05D005577 ORTHO05D006941 1.7e-54 217.2 334 41.0
Lj6A829T30 Lonicera japonica HOM05D005577 ORTHO05D006941 1.3e-51 207.6 369 38.2
GSVIVG01029087001 Vitis vinifera HOM05D005577 ORTHO05D006941 2.5e-50 203.4 390 37.2
Rhsim12G0094300 Rhododendron simsii HOM05D005577 ORTHO05D006941 9.6e-50 201.4 393 37.4
Ah.03g135990 Amaranthus hybridus HOM05D005577 ORTHO05D006941 1.2e-49 201.1 370 37.8
CSS0033060 Camellia sinensis var. sinensis HOM05D005577 ORTHO05D006941 4.7e-49 199.1 359 38.4
CSS0039862 Camellia sinensis var. sinensis HOM05D005577 ORTHO05D006941 6.2e-49 198.7 393 36.4
Peaxi162Scf00128g01539 Petunia axillaris HOM05D005577 ORTHO05D006941 2.4e-48 196.8 390 35.6
TWI36G1278 Tripterygium wilfordii HOM05D005577 ORTHO05D006941 2.4e-48 196.8 390 34.6
TWI75G1135 Tripterygium wilfordii HOM05D005577 ORTHO05D006941 2.4e-48 196.8 389 35.0
Migut.K00987 Erythranthe guttata HOM05D005577 ORTHO05D006941 5.2e-48 195.7 390 35.9
CiPaw.06G104800 Carya illinoinensis HOM05D005577 ORTHO05D006941 8.9e-48 194.9 390 35.1
SalBow2G2693 Salvia bowleyana HOM05D005577 ORTHO05D006941 2.6e-47 193.4 387 37.0
Nitab4.5_0008235g0010 Nicotiana tabacum HOM05D005577 ORTHO05D006941 3.4e-47 193.0 378 37.3
Cfa009383 Carpinus fangiana HOM05D005577 ORTHO05D006941 4.4e-47 192.6 390 35.1
Sopen04g017360 Solanum pennellii HOM05D005577 ORTHO05D006941 5.8e-47 192.2 389 35.7
DCAR_024669 Daucus carota HOM05D005577 ORTHO05D006941 3.8e-46 189.5 360 36.1
Prupe.1G223400 Prunus persica HOM05D005577 ORTHO05D006941 4.9e-46 189.1 360 36.9
Nn3g16413 Nelumbo nucifera HOM05D005577 ORTHO05D006941 8.4e-46 188.3 390 34.9
Nitab4.5_0001010g0020 Nicotiana tabacum HOM05D005577 ORTHO05D006941 8.4e-46 188.3 388 36.9
Hma1.2p1_0065F.1_g035160 Hydrangea macrophylla HOM05D005577 ORTHO05D006941 1.1e-45 188.0 375 35.7
Solyc04g045530.4 Solanum lycopersicum HOM05D005577 ORTHO05D006941 1.1e-45 188.0 389 35.5
Gohir.A03G117000 Gossypium hirsutum HOM05D005577 ORTHO05D006941 1.4e-45 187.6 390 34.4
Haze_12444 Corylus avellana HOM05D005577 ORTHO05D006941 2.4e-45 186.8 415 33.5
Ciclev10031511m.g Citrus clementina HOM05D005577 ORTHO05D006941 3.2e-45 186.4 390 34.1
Cc11_g17150 Coffea canephora HOM05D005577 ORTHO05D006941 5.4e-45 185.7 360 36.4
Duzib248G1391 Durio zibethinus HOM05D005577 ORTHO05D006941 5.4e-45 185.7 390 34.1
TAR629G1549 Trochodendron aralioides HOM05D005577 ORTHO05D006941 5.4e-45 185.7 390 34.6
Thecc.02G202700 Theobroma cacao HOM05D005577 ORTHO05D006941 7.1e-45 185.3 390 34.6
ClCG06G002100 Citrullus lanatus HOM05D005577 ORTHO05D006941 1.2e-44 184.5 361 34.9
Gorai.005G164500 Gossypium raimondii HOM05D005577 ORTHO05D006941 2.1e-44 183.7 390 33.8
Sc11g0000360 Simmondsia chinensis HOM05D005577 ORTHO05D006941 2.7e-44 183.3 393 35.9
Phvul.L003546 Phaseolus vulgaris HOM05D005577 ORTHO05D006941 3.5e-44 183.0 403 33.0
Gohir.D02G146900 Gossypium hirsutum HOM05D005577 ORTHO05D006941 4.6e-44 182.6 390 33.8
Hund25478 Selenicereus undatus HOM05D005577 ORTHO05D006941 4.6e-44 182.6 390 34.6
ECA233G0246 Erigeron canadensis HOM05D005577 ORTHO05D006941 6.0e-44 182.2 390 34.1
MSTRG.487 Avicennia marina HOM05D005577 ORTHO05D006941 7.8e-44 181.8 390 34.4
Oeu058914.1 Olea europaea HOM05D005577 ORTHO05D006941 3.0e-43 179.9 407 33.4
Actinidia09628 Actinidia chinensis HOM05D005577 ORTHO05D006941 3.9e-43 179.5 384 33.6
EL10Ac6g13532 Beta vulgaris HOM05D005577 ORTHO05D006941 5.1e-43 179.1 390 34.1
Glyma.05G148900 Glycine max HOM05D005577 ORTHO05D006941 1.5e-42 177.6 403 32.8
FAN22G0128 Fragaria x ananassa HOM05D005577 ORTHO05D006941 1.9e-42 177.2 390 34.1
Glyma.08G105600 Glycine max HOM05D005577 ORTHO05D006941 1.9e-42 177.2 390 33.8
Eucgr.H04616 Eucalyptus grandis HOM05D005577 ORTHO05D006941 2.5e-42 176.8 390 33.1
Manes.13G009300 Manihot esculenta HOM05D005577 ORTHO05D006941 2.5e-42 176.8 390 33.3
Lalb_Chr07g0187001 Lupinus albus HOM05D005577 ORTHO05D006941 3.3e-42 176.4 392 33.2
Medtr8g097160 Medicago truncatula HOM05D005577 ORTHO05D006941 3.3e-42 176.4 390 34.1
arahy.Tifrunner.gnm1.ann1.V9CB21 Arachis hypogaea HOM05D005577 ORTHO05D006941 5.6e-42 175.6 408 32.6
CAN.G97.33 Capsicum annuum HOM05D005577 ORTHO05D006941 5.6e-42 175.6 388 34.0
Sed0021319 Sechium edule HOM05D005577 ORTHO05D006941 5.6e-42 175.6 403 32.0
vmacro17973 Vaccinium macrocarpon HOM05D005577 ORTHO05D006941 5.6e-42 175.6 401 33.9
arahy.Tifrunner.gnm1.ann1.HTD3J8 Arachis hypogaea HOM05D005577 ORTHO05D006941 7.3e-42 175.3 408 32.6
HanXRQChr12g0354651 Helianthus annuus HOM05D005577 ORTHO05D006941 1.3e-41 174.5 389 33.2
MD13G1121900 Malus domestica HOM05D005577 ORTHO05D006941 1.6e-41 174.1 391 34.0
Manes.12G008900 Manihot esculenta HOM05D005577 ORTHO05D006941 2.8e-41 173.3 390 33.1
HanXRQChr12g0357271 Helianthus annuus HOM05D005577 ORTHO05D006941 3.6e-41 172.9 389 33.4
FAN12G2046 Fragaria x ananassa HOM05D005577 ORTHO05D006941 4.8e-41 172.6 390 33.6
QL03p051875 Quercus lobata HOM05D005577 ORTHO05D006941 6.2e-41 172.2 400 32.8
MELO3C022319.2 Cucumis melo HOM05D005577 ORTHO05D006941 8.1e-41 171.8 411 31.4
Potri.003G169300 Populus trichocarpa HOM05D005577 ORTHO05D006941 8.1e-41 171.8 391 34.0
FAN07G0551 Fragaria x ananassa HOM05D005577 ORTHO05D006941 1.1e-40 171.4 390 33.3
CANSAT01G0699 Cannabis sativa HOM05D005577 ORTHO05D006941 2.4e-40 170.2 391 33.2
Os07g0406800 Oryza sativa ssp. japonica HOM05D005577 ORTHO05D006941 3.1e-40 169.9 389 33.2
ATR0561G025 Amborella trichopoda HOM05D005577 ORTHO05D006941 4.0e-40 169.5 360 32.8
Zm00001eb421110 Zea mays HOM05D005577 ORTHO05D006941 4.0e-40 169.5 389 31.6
CsaV3_6G008170 Cucumis sativus L. HOM05D005577 ORTHO05D006941 5.3e-40 169.1 420 31.2
Ca_18016_v3 Cicer arietinum L. HOM05D005577 ORTHO05D006941 6.9e-40 168.7 390 33.3
RcHm_v2.0_Chr4g0418271 Rosa chinensis HOM05D005577 ORTHO05D006941 1.2e-39 167.9 390 33.3
HPP92_020263 Vanilla planifolia HOM05D005577 ORTHO05D006941 1.2e-39 167.9 399 31.8
TPR.G26572 Trifolium pratense HOM05D005577 ORTHO05D006941 2.0e-39 167.2 390 33.3
QL02p017501 Quercus lobata HOM05D005577 ORTHO05D006941 2.6e-39 166.8 393 32.3
Aqoxy5G03309 Aquilegia oxysepala HOM05D005577 ORTHO05D006941 5.8e-39 165.6 391 31.7
Thhalv10018528m.g Eutrema salsugineum HOM05D005577 ORTHO05D006941 2.2e-38 163.7 408 32.4
BcaB03g15345 Brassica carinata HOM05D005577 ORTHO05D006941 3.8e-38 162.9 386 32.1
Lsat_1_v5_gn_2_63520 Lactuca sativa HOM05D005577 ORTHO05D006941 2.4e-37 160.2 390 32.1
Lj4g0002319 Lotus japonicus HOM05D005577 ORTHO05D006941 3.2e-37 159.8 403 31.0
SGA_v2.0_scaffold114G31915 Striga asiatica HOM05D005577 ORTHO05D006941 7.1e-37 158.7 347 34.3
THA.LOC104807138 Tarenaya hassleriana HOM05D005577 ORTHO05D006941 1.2e-36 157.9 386 31.9
A02p14150 Brassica napus HOM05D005577 ORTHO05D006941 1.6e-36 157.5 386 31.9
THA.LOC104825491 Tarenaya hassleriana HOM05D005577 ORTHO05D006941 1.6e-36 157.5 386 32.1
C02p22860 Brassica napus HOM05D005577 ORTHO05D006941 2.1e-36 157.1 386 31.9
Sp5g22260 Schrenkiella parvula HOM05D005577 ORTHO05D006941 2.1e-36 157.1 360 31.9
BcaC03g14832 Brassica carinata HOM05D005577 ORTHO05D006941 2.7e-36 156.8 385 31.9
CARHR059800 Cardamine hirsuta HOM05D005577 ORTHO05D006941 4.6e-36 156.0 411 31.1
COL.COLO4_20442 Corchorus olitorius HOM05D005577 ORTHO05D006941 6.0e-36 155.6 390 32.6
A07p32630 Brassica napus HOM05D005577 ORTHO05D006941 1.0e-35 154.8 371 31.3
BraA07t30887Z Brassica rapa HOM05D005577 ORTHO05D006941 1.3e-35 154.5 379 31.1
Zm00001eb407100 Zea mays HOM05D005577 ORTHO05D006941 1.3e-35 154.5 349 32.7
CDE05G3041 Ceratophyllum demersum HOM05D005577 ORTHO05D006941 3.0e-35 153.3 400 30.2
PSO017G5787 Papaver somniferum HOM05D005577 ORTHO05D006941 1.5e-34 151.0 390 31.0
Carub.0002s1360 Capsella rubella HOM05D005577 ORTHO05D006941 2.5e-34 150.2 410 30.5
SEGI_29210 Sequoiadendron giganteum HOM05D005577 ORTHO05D006941 2.5e-34 150.2 369 30.6
Sabra03G0124100 Salix brachista HOM05D005577 ORTHO05D006941 3.3e-34 149.8 405 31.6
BolC2t08435H Brassica oleracea HOM05D005577 ORTHO05D006941 4.3e-34 149.4 406 30.3
AT1G67320 Arabidopsis thaliana HOM05D005577 ORTHO05D006941 3.6e-33 146.4 410 30.2
AL2G25840 Arabidopsis lyrata HOM05D005577 ORTHO05D006941 4.8e-33 146.0 408 30.1
BraA02t06478Z Brassica rapa HOM05D005577 ORTHO05D006941 6.2e-33 145.6 415 29.6
unitig_699.g19962 Utricularia gibba HOM05D005577 ORTHO05D006941 1.1e-32 144.8 422 28.7
Aa31LG2G15630 Aethionema arabicum HOM05D005577 ORTHO05D006941 1.4e-32 144.4 394 30.2
Hma1.2p1_0065F.1_g035170 Hydrangea macrophylla HOM05D005577 ORTHO05D006941 1.8e-32 144.1 287 36.2
AUR62005646 Chenopodium quinoa HOM05D005577 ORTHO05D006941 5.8e-31 139.0 86 72.1
CBR_g45479 Chara braunii HOM05D005577 ORTHO05D006941 1.1e-29 134.8 396 26.8
Psat7g076760 Pisum sativum HOM05D005577 ORTHO05D006941 1.1e-29 134.8 109 60.6
AagrBONN_evm.TU.Sc2ySwM_362.1325 Anthoceros agrestis HOM05D005577 ORTHO05D006941 7.1e-29 132.1 86 66.3
MD16G1122200 Malus domestica HOM05D005577 ORTHO05D006941 7.1e-29 132.1 184 45.7
Mapoly0051s0085 Marchantia polymorpha HOM05D005577 ORTHO05D006941 7.1e-29 132.1 378 26.7
FvH4_4g14550 Fragaria vesca HOM05D005577 ORTHO05D006941 9.3e-29 131.7 354 31.4
AUR62028904 Chenopodium quinoa HOM05D005577 ORTHO05D006941 1.6e-28 131.0 307 33.9
QL03p057485 Quercus lobata HOM05D005577 ORTHO05D006941 1.1e-26 124.8 335 31.3
SMO340G0130 Selaginella moellendorffii HOM05D005577 ORTHO05D006941 1.3e-25 121.3 96 57.3
Pp3c17_16180 Physcomitrium patens HOM05D005577 ORTHO05D006941 2.6e-23 113.6 83 57.8
Atru.chr11.2352 Acer truncatum HOM05D005577 ORTHO05D006941 7.1e-21 105.5 71 71.8
Cre06.g293000 Chlamydomonas reinhardtii HOM05D005577 ORTHO05D006941 1.8e-19 100.9 83 54.2
Psat7g076800 Pisum sativum HOM05D005577 ORTHO05D006941 1.5e-18 97.8 147 41.5
Aqoxy7G01339 Aquilegia oxysepala HOM05D005577 ORTHO05D006941 2.5e-18 97.1 52 82.7
Potri.017G053801 Populus trichocarpa HOM05D005577 ORTHO05D006941 3.3e-18 96.7 50 84.0
MCO02G430 Micromonas commoda HOM05D005577 ORTHO05D006941 7.4e-18 95.5 86 45.3
BcaB05g24262 Brassica carinata HOM05D005577 ORTHO05D006941 9.0e-16 88.6 55 70.9
QL10p065845 Quercus lobata HOM05D000176 ORTHO05D000106 3.8e-14 83.2 109 45.9
PRCOL_00003669 Prasinoderma coloniale HOM05D005577 ORTHO05D006941 6.5e-14 82.4 83 50.6
MD09G1083700 Malus domestica HOM05D005577 ORTHO05D006941 3.2e-13 80.1 56 66.1
TAR371G1028 Trochodendron aralioides HOM05D005577 ORTHO05D006941 4.8e-09 66.2 105 42.9
Atru.chr11.2354 Acer truncatum HOM05D005577 ORTHO05D006941 1.4e-08 64.7 68 54.4
Lsat_1_v5_gn_0_16180 Lactuca sativa HOM05D005577 ORTHO05D006941 1.4e-08 64.7 86 44.2
SHI17980 Sapria himalayana HOM05D005577 ORTHO05D006941 2.0e-07 60.8 45 57.8
SHI17982 Sapria himalayana HOM05D005577 ORTHO05D006941 3.4e-07 60.1 71 47.9
SHI17983 Sapria himalayana HOM05D005577 ORTHO05D006941 3.4e-07 60.1 38 71.1


User provided reference genes

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