Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv17458 Davidia involucrata HOM05D007687 ORTHO05D009692 3.3e-92 341.7 168 100.0
Dinv07975 Davidia involucrata HOM05D007687 ORTHO05D009692 1.6e-38 163.3 223 47.5
Lj5A137T61 Lonicera japonica HOM05D007687 ORTHO05D009692 1.7e-24 116.7 163 44.2
MD14G1216500 Malus domestica HOM05D007687 ORTHO05D009692 4.2e-23 112.1 167 44.9
Atru.chr4.1593 Acer truncatum HOM05D007687 ORTHO05D009692 5.5e-23 111.7 139 48.9
QL10p020735 Quercus lobata HOM05D007687 ORTHO05D009692 6.8e-21 104.8 152 40.1
Thecc.03G108300 Theobroma cacao HOM05D007687 ORTHO05D009692 4.4e-20 102.1 175 41.1
Sed0010577 Sechium edule HOM05D007687 ORTHO05D009692 1.3e-19 100.5 172 40.1
Duzib068G1012 Durio zibethinus HOM05D007687 ORTHO05D009692 2.2e-19 99.8 135 45.9
Duzib084G0111 Durio zibethinus HOM05D007687 ORTHO05D009692 1.8e-18 96.7 156 38.5
CAN.G982.38 Capsicum annuum HOM05D007687 ORTHO05D009692 5.4e-18 95.1 140 40.7
Nitab4.5_0002467g0050 Nicotiana tabacum HOM05D007687 ORTHO05D009692 9.2e-18 94.4 146 41.1
Duzib205G1319 Durio zibethinus HOM05D007687 ORTHO05D009692 3.5e-17 92.4 150 42.0
Nitab4.5_0005994g0030 Nicotiana tabacum HOM05D007687 ORTHO05D009692 3.5e-17 92.4 145 40.7
Prupe.5G209900 Prunus persica HOM05D007687 ORTHO05D009692 1.0e-16 90.9 152 39.5
Ciclev10024235m.g Citrus clementina HOM05D007687 ORTHO05D009692 1.7e-16 90.1 135 41.5
TAR629G0229 Trochodendron aralioides HOM05D007687 ORTHO05D009692 1.7e-16 90.1 155 40.6
Manes.14G089000 Manihot esculenta HOM05D007687 ORTHO05D009692 2.9e-16 89.4 147 38.8
Sopen03g033850 Solanum pennellii HOM05D007687 ORTHO05D009692 3.8e-16 89.0 124 41.9
Actinidia10442 Actinidia chinensis HOM05D007687 ORTHO05D009692 1.9e-15 86.7 127 45.7
TWI60G1328 Tripterygium wilfordii HOM05D007687 ORTHO05D009692 3.3e-15 85.9 164 38.4
Oeu044771.1 Olea europaea HOM05D007687 ORTHO05D009692 4.3e-15 85.5 157 36.9
Solyc03g114770.3 Solanum lycopersicum HOM05D007687 ORTHO05D009692 4.3e-15 85.5 148 38.5
Nn4g23535 Nelumbo nucifera HOM05D007687 ORTHO05D009692 9.5e-15 84.3 150 38.7
Peaxi162Scf00017g03282 Petunia axillaris HOM05D007687 ORTHO05D009692 3.6e-14 82.4 151 35.8
COL.COLO4_27494 Corchorus olitorius HOM05D000180 ORTHO05D009692 6.8e-13 78.2 147 36.7
ClCG04G011570 Citrullus lanatus HOM05D007687 ORTHO05D009692 8.9e-13 77.8 160 35.0
Cc04_g08290 Coffea canephora HOM05D007687 ORTHO05D009692 6.4e-11 71.6 142 35.9
Potri.015G048600 Populus trichocarpa HOM05D007687 ORTHO05D009692 8.3e-11 71.2 150 34.7
CiPaw.15G114100 Carya illinoinensis HOM05D007687 ORTHO05D009692 5.4e-10 68.6 123 38.2
Rhsim01G0212900 Rhododendron simsii HOM05D006174 ORTHO05D007987 2.0e-09 66.6 133 39.8
FvH4_5g13402 Fragaria vesca HOM05D007687 ORTHO05D009692 4.6e-09 65.5 196 30.6
FAN18G0959 Fragaria x ananassa HOM05D007687 ORTHO05D009692 4.6e-09 65.5 196 30.6
Sabra15G0078700 Salix brachista HOM05D007687 ORTHO05D009692 4.6e-09 65.5 142 36.6
AL8G37500 Arabidopsis lyrata HOM05D007687 ORTHO05D009692 1.3e-08 63.9 166 31.9
FAN13G2354 Fragaria x ananassa HOM05D007687 ORTHO05D009692 1.3e-08 63.9 195 29.7
AT5G60880 Arabidopsis thaliana HOM05D007687 ORTHO05D009692 3.0e-08 62.8 163 32.5
FAN08G0723 Fragaria x ananassa HOM05D007687 ORTHO05D009692 5.0e-08 62.0 181 30.9
Actinidia04796 Actinidia chinensis HOM05D007687 ORTHO05D009692 1.5e-07 60.5 90 46.7
Thhalv10004801m.g Eutrema salsugineum HOM05D007687 ORTHO05D009692 1.9e-07 60.1 176 31.8
Rhsim08G0141900 Rhododendron simsii HOM05D006174 ORTHO05D007987 1.9e-07 60.1 147 36.1
BolC7t44987H Brassica oleracea HOM05D007687 ORTHO05D009692 7.3e-07 58.2 179 29.6
Gohir.A09G243800 Gossypium hirsutum HOM05D007687 ORTHO05D009692 7.3e-07 58.2 135 37.8
Gohir.D09G244550 Gossypium hirsutum HOM05D007687 ORTHO05D009692 7.3e-07 58.2 144 35.4
Gohir.D09G244500 Gossypium hirsutum HOM05D007687 ORTHO05D009692 9.5e-07 57.8 148 35.1
BcaNung02611 Brassica carinata HOM05D007687 ORTHO05D009692 2.1e-06 56.6 179 29.1
C07p44640 Brassica napus HOM05D007687 ORTHO05D009692 2.1e-06 56.6 179 29.1
Sp2g24190 Schrenkiella parvula HOM05D007687 ORTHO05D009692 2.8e-06 56.2 161 29.8
SGA_v2.0_scaffold105G30431 Striga asiatica HOM05D007687 ORTHO05D009692 3.6e-06 55.8 103 37.9
Gorai.006G268600 Gossypium raimondii HOM05D007687 ORTHO05D009692 4.7e-06 55.5 144 34.7


User provided reference genes

Program Settings