Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv17424 Davidia involucrata HOM05D005313 ORTHO05D006317 2.2e-191 672.2 343 100.0
CSS0048776 Camellia sinensis var. sinensis HOM05D005313 ORTHO05D006317 7.5e-152 540.8 321 85.7
Lj6A747T68 Lonicera japonica HOM05D005313 ORTHO05D006317 8.3e-151 537.3 321 86.0
TAR623G0220 Trochodendron aralioides HOM05D005313 ORTHO05D006317 2.1e-149 532.7 318 84.3
Rhsim02G0199800 Rhododendron simsii HOM05D005313 ORTHO05D006317 1.6e-146 523.1 321 82.6
vmacro10642 Vaccinium macrocarpon HOM05D005313 ORTHO05D006317 2.8e-146 522.3 321 82.9
COL.COLO4_20475 Corchorus olitorius HOM05D005313 ORTHO05D006317 3.4e-144 515.4 322 82.0
Potri.008G128900 Populus trichocarpa HOM05D005313 ORTHO05D006317 1.7e-143 513.1 314 82.5
Haze_11011 Corylus avellana HOM05D005313 ORTHO05D006317 4.9e-143 511.5 318 82.1
Thecc.02G280500 Theobroma cacao HOM05D005313 ORTHO05D006317 4.2e-142 508.4 320 82.8
GSVIVG01011763001 Vitis vinifera HOM05D005313 ORTHO05D006317 9.2e-142 507.3 282 90.1
Lalb_Chr17g0338641 Lupinus albus HOM05D005313 ORTHO05D006317 1.2e-141 506.9 302 83.4
TWI31G1405 Tripterygium wilfordii HOM05D005313 ORTHO05D006317 1.2e-141 506.9 303 84.2
Glyma.02G238100 Glycine max HOM05D005313 ORTHO05D006317 4.6e-141 505.0 316 80.4
Gohir.A01G152800 Gossypium hirsutum HOM05D005313 ORTHO05D006317 4.6e-141 505.0 323 81.1
PSO384G2037 Papaver somniferum HOM05D005313 ORTHO05D006317 4.6e-141 505.0 308 82.1
Cc11_g08770 Coffea canephora HOM05D005313 ORTHO05D006317 6.0e-141 504.6 321 80.4
QL01p001863 Quercus lobata HOM05D005313 ORTHO05D006317 6.0e-141 504.6 323 80.8
Gorai.002G179900 Gossypium raimondii HOM05D005313 ORTHO05D006317 1.7e-140 503.1 323 80.5
Glyma.09G118600 Glycine max HOM05D005313 ORTHO05D006317 3.0e-140 502.3 316 80.1
Lj2g0003652 Lotus japonicus HOM05D005313 ORTHO05D006317 1.1e-139 500.4 302 83.1
Medtr1g030750 Medicago truncatula HOM05D005313 ORTHO05D006317 1.5e-139 500.0 317 80.4
Gohir.D01G145600 Gossypium hirsutum HOM05D005313 ORTHO05D006317 4.3e-139 498.4 323 79.6
Psat6g042560 Pisum sativum HOM05D005313 ORTHO05D006317 4.3e-139 498.4 317 79.8
Atru.chr9.122 Acer truncatum HOM05D005313 ORTHO05D006317 1.2e-138 496.9 306 82.0
Eucgr.G02191 Eucalyptus grandis HOM05D005313 ORTHO05D006317 1.2e-138 496.9 303 82.8
Phvul.003G023500 Phaseolus vulgaris HOM05D005313 ORTHO05D006317 1.2e-138 496.9 316 79.4
VMungo1215G0481 Vigna mungo HOM05D005313 ORTHO05D006317 1.2e-138 496.9 316 78.2
Oeu024584.1 Olea europaea HOM05D005313 ORTHO05D006317 2.1e-138 496.1 313 80.8
MSTRG.895 Avicennia marina HOM05D005313 ORTHO05D006317 2.8e-138 495.7 321 79.8
PSO339G3364 Papaver somniferum HOM05D005313 ORTHO05D006317 6.2e-138 494.6 308 81.2
SalBow4G0808 Salvia bowleyana HOM05D005313 ORTHO05D006317 5.3e-137 491.5 323 78.6
Cfa008602 Carpinus fangiana HOM05D005313 ORTHO05D006317 1.2e-136 490.3 296 83.8
SalBow4G0219 Salvia bowleyana HOM05D005313 ORTHO05D006317 2.0e-136 489.6 322 78.6
Solyc05g008180.3 Solanum lycopersicum HOM05D005313 ORTHO05D006317 4.4e-136 488.4 321 77.3
Sopen05g004020 Solanum pennellii HOM05D005313 ORTHO05D006317 5.8e-136 488.0 321 77.3
MD16G1029000 Malus domestica HOM05D005313 ORTHO05D006317 1.3e-135 486.9 313 80.2
Nitab4.5_0000742g0010 Nicotiana tabacum HOM05D005313 ORTHO05D006317 1.3e-135 486.9 321 77.9
Prupe.1G323900 Prunus persica HOM05D005313 ORTHO05D006317 1.3e-135 486.9 302 82.1
THA.LOC104805057 Tarenaya hassleriana HOM05D005313 ORTHO05D006317 1.3e-135 486.9 321 76.3
Manes.17G006600 Manihot esculenta HOM05D005313 ORTHO05D006317 8.4e-135 484.2 310 80.0
Ca_25713_v3 Cicer arietinum L. HOM05D005313 ORTHO05D006317 2.4e-134 482.6 336 74.1
ECA246G2448 Erigeron canadensis HOM05D005313 ORTHO05D006317 2.4e-134 482.6 322 77.0
CANSAT01G3269 Cannabis sativa HOM05D005313 ORTHO05D006317 5.4e-134 481.5 324 76.5
Sabra08G0097700 Salix brachista HOM05D005313 ORTHO05D006317 1.6e-133 479.9 375 68.5
HanXRQChr15g0488661 Helianthus annuus HOM05D005313 ORTHO05D006317 2.7e-133 479.2 329 74.8
PGR119G0894 Punica granatum HOM05D005313 ORTHO05D006317 2.7e-133 479.2 297 81.1
FvH4_4g32330 Fragaria vesca HOM05D005313 ORTHO05D006317 3.5e-133 478.8 302 80.1
Peaxi162Scf00159g00112 Petunia axillaris HOM05D005313 ORTHO05D006317 6.0e-133 478.0 312 78.8
Ciclev10018157m.g Citrus clementina HOM05D005313 ORTHO05D006317 1.0e-132 477.2 307 80.5
RcHm_v2.0_Chr4g0441121 Rosa chinensis HOM05D005313 ORTHO05D006317 1.0e-132 477.2 287 82.6
Peaxi162Scf00450g00614 Petunia axillaris HOM05D005313 ORTHO05D006317 3.9e-132 475.3 320 75.6
BcaB07g30404 Brassica carinata HOM05D005313 ORTHO05D006317 5.1e-132 474.9 320 74.7
CDE05G1915 Ceratophyllum demersum HOM05D005313 ORTHO05D006317 1.5e-131 473.4 313 76.4
Thhalv10000908m.g Eutrema salsugineum HOM05D005313 ORTHO05D006317 1.5e-131 473.4 319 74.9
AT2G01350 Arabidopsis thaliana HOM05D005313 ORTHO05D006317 1.9e-131 473.0 317 75.7
Aqoxy1G00025 Aquilegia oxysepala HOM05D005313 ORTHO05D006317 2.5e-131 472.6 321 75.4
AL5G10310 Arabidopsis lyrata HOM05D005313 ORTHO05D006317 2.5e-131 472.6 317 74.8
FAN17G2517 Fragaria x ananassa HOM05D005313 ORTHO05D006317 2.5e-131 472.6 328 75.6
PGSC0003DMG400030501 Solanum tuberosum HOM05D005313 ORTHO05D006317 2.5e-131 472.6 285 82.1
CiPaw.06G012200 Carya illinoinensis HOM05D005313 ORTHO05D006317 7.3e-131 471.1 313 77.3
Lsat_1_v5_gn_3_54641 Lactuca sativa HOM05D005313 ORTHO05D006317 1.6e-130 469.9 329 74.8
Duzib248G1474 Durio zibethinus HOM05D005313 ORTHO05D006317 2.8e-130 469.2 303 80.2
MELO3C018332.2 Cucumis melo HOM05D005313 ORTHO05D006317 1.1e-129 467.2 303 77.2
FAN22G0311 Fragaria x ananassa HOM05D005313 ORTHO05D006317 1.4e-129 466.8 328 74.7
Sp2g12800 Schrenkiella parvula HOM05D005313 ORTHO05D006317 1.4e-129 466.8 319 73.4
Aa31LG2G8560 Aethionema arabicum HOM05D005313 ORTHO05D006317 3.1e-129 465.7 329 72.6
CsaV3_5G013570 Cucumis sativus L. HOM05D005313 ORTHO05D006317 3.1e-129 465.7 303 77.2
CARHR143870 Cardamine hirsuta HOM05D005313 ORTHO05D006317 4.0e-129 465.3 322 73.3
Sc14g0007170 Simmondsia chinensis HOM05D005313 ORTHO05D006317 5.3e-129 464.9 282 81.6
Carub.0005s0033 Capsella rubella HOM05D005313 ORTHO05D006317 1.5e-128 463.4 287 80.5
A02p31910 Brassica napus HOM05D005313 ORTHO05D006317 2.0e-128 463.0 321 73.8
BolC2t11026H Brassica oleracea HOM05D005313 ORTHO05D006317 2.0e-128 463.0 321 73.2
BraA02t08201Z Brassica rapa HOM05D005313 ORTHO05D006317 2.0e-128 463.0 321 73.8
C02p49400 Brassica napus HOM05D005313 ORTHO05D006317 4.5e-128 461.8 320 73.4
AUR62017725 Chenopodium quinoa HOM05D005313 ORTHO05D006317 4.5e-128 461.8 278 82.7
BcaC03g17029 Brassica carinata HOM05D005313 ORTHO05D006317 5.8e-128 461.5 321 72.9
FAN07G2253 Fragaria x ananassa HOM05D005313 ORTHO05D006317 1.7e-127 459.9 346 70.8
Hund08629 Selenicereus undatus HOM05D005313 ORTHO05D006317 3.8e-127 458.8 278 82.4
Migut.L00987 Erythranthe guttata HOM05D005313 ORTHO05D006317 8.4e-127 457.6 296 78.7
Sed0021241 Sechium edule HOM05D005313 ORTHO05D006317 2.4e-126 456.1 302 75.8
EL10Ac7g15995 Beta vulgaris HOM05D005313 ORTHO05D006317 7.1e-126 454.5 278 81.3
HPP92_025383 Vanilla planifolia HOM05D005313 ORTHO05D006317 1.1e-123 447.2 301 73.1
Duzib248G1582 Durio zibethinus HOM05D005313 ORTHO05D006317 1.5e-123 446.8 323 74.0
SGA_v2.0_scaffold50G18517 Striga asiatica HOM05D005313 ORTHO05D006317 9.6e-123 444.1 293 76.8
Os09g0553600 Oryza sativa ssp. japonica HOM05D005313 ORTHO05D006317 2.4e-121 439.5 280 75.0
Zm00001eb104420 Zea mays HOM05D005313 ORTHO05D006317 9.0e-121 437.6 280 75.4
AUR62032955 Chenopodium quinoa HOM05D005313 ORTHO05D006317 1.2e-120 437.2 351 67.2
CAN.G1334.2 Capsicum annuum HOM05D005313 ORTHO05D006317 1.6e-117 426.8 254 83.5
Ah.01g012630 Amaranthus hybridus HOM05D005313 ORTHO05D006317 6.0e-117 424.9 278 77.7
Cpa.g.sc65.129 Carica papaya HOM05D005313 ORTHO05D006317 5.3e-113 411.8 294 72.8
BcaC03g17031 Brassica carinata HOM05D005313 ORTHO05D006317 2.6e-112 409.5 321 67.9
unitig_0.g2330 Utricularia gibba HOM05D005313 ORTHO05D006317 6.5e-111 404.8 310 67.4
Pp3c8_18030 Physcomitrium patens HOM05D005313 ORTHO05D006317 1.1e-110 404.1 302 67.5
FAN12G1743 Fragaria x ananassa HOM05D005313 ORTHO05D006317 9.3e-110 401.0 356 62.4
Nn2g15695 Nelumbo nucifera HOM05D005313 ORTHO05D006317 2.2e-106 389.8 322 67.1
SEGI_23840 Sequoiadendron giganteum HOM05D005313 ORTHO05D006317 8.2e-106 387.9 258 73.6
Mapoly0011s0070 Marchantia polymorpha HOM05D005313 ORTHO05D006317 1.0e-103 380.9 280 66.4
SMO164G0169 Selaginella moellendorffii HOM05D005313 ORTHO05D006317 1.7e-103 380.2 280 68.2
arahy.Tifrunner.gnm1.ann1.Y1EHRK Arachis hypogaea HOM05D005313 ORTHO05D006317 1.4e-102 377.1 302 65.9
arahy.Tifrunner.gnm1.ann1.G5QWBZ Arachis hypogaea HOM05D005313 ORTHO05D006317 3.6e-101 372.5 311 64.6
DCAR_023608 Daucus carota HOM05D005313 ORTHO05D006317 1.8e-100 370.2 221 84.2
Ca_12605_v3 Cicer arietinum L. HOM05D005313 ORTHO05D006317 9.7e-99 364.4 211 83.4
Nitab4.5_0004816g0010 Nicotiana tabacum HOM05D005313 ORTHO05D006317 2.0e-96 356.7 209 85.2
CBR_g30917 Chara braunii HOM05D005313 ORTHO05D006317 1.1e-94 350.9 318 59.7
MCO15G382 Micromonas commoda HOM05D005313 ORTHO05D006317 2.6e-80 303.1 287 54.7
AagrBONN_evm.TU.Sc2ySwM_117.3802 Anthoceros agrestis HOM05D005313 ORTHO05D006317 4.5e-80 302.4 223 67.3
PRCOL_00006420 Prasinoderma coloniale HOM05D005313 ORTHO05D006317 6.8e-76 288.5 293 52.6
Dinv05167 Davidia involucrata HOM05D005313 ORTHO05D006317 5.7e-75 285.4 160 93.1
Cre02.g141200 Chlamydomonas reinhardtii HOM05D005313 ORTHO05D006317 2.8e-74 283.1 289 54.7
Potri.010G113500 Populus trichocarpa HOM05D005313 ORTHO05D006317 1.1e-70 271.2 212 65.6
ClCG07G006260 Citrullus lanatus HOM05D005313 ORTHO05D006317 6.8e-68 261.9 163 79.1
ATR0807G196 Amborella trichopoda HOM05D005313 ORTHO05D006317 7.5e-67 258.5 159 81.1
Actinidia26811 Actinidia chinensis HOM05D005313 ORTHO05D006317 1.1e-62 244.6 151 80.1
Zm00001eb320780 Zea mays HOM05D005313 ORTHO05D006317 2.6e-59 233.4 187 63.1
CsaV3_UNG236450 Cucumis sativus L. HOM05D005313 ORTHO05D006317 5.4e-57 225.7 282 47.5
SHI04677 Sapria himalayana HOM05D005313 ORTHO05D006317 1.2e-56 224.6 160 71.9
Migut.L00982 Erythranthe guttata HOM05D005313 ORTHO05D006317 4.5e-56 222.6 161 72.0
SHI04675 Sapria himalayana HOM05D005313 ORTHO05D006317 2.3e-47 193.7 148 67.6
AagrBONN_evm.TU.Sc2ySwM_368.1836 Anthoceros agrestis HOM05D005313 ORTHO05D006317 1.7e-39 167.5 122 64.8
Actinidia14964 Actinidia chinensis HOM05D005313 ORTHO05D006317 2.3e-39 167.2 265 43.0
RcHm_v2.0_Chr2g0157601 Rosa chinensis HOM05D005313 ORTHO05D006317 9.5e-38 161.8 107 72.0
ClCG07G006250 Citrullus lanatus HOM05D005313 ORTHO05D006317 6.8e-36 155.6 100 71.0
Sabra10G0083500 Salix brachista HOM05D005313 ORTHO05D006317 1.5e-35 154.5 266 39.5
A06p44480 Brassica napus HOM05D005313 ORTHO05D006317 7.6e-35 152.1 198 49.0
Ca_31307_v3 Cicer arietinum L. HOM05D005313 ORTHO05D006317 3.7e-34 149.8 262 35.5
COL.COLO4_10085 Corchorus olitorius HOM05D005313 ORTHO05D006317 6.6e-31 139.0 85 77.6
Glyma.07G165500 Glycine max HOM05D005313 ORTHO05D006317 5.2e-28 129.4 82 80.5
Oeu045874.1 Olea europaea HOM05D005313 ORTHO05D006317 1.9e-25 120.9 179 45.8
CSS0042289 Camellia sinensis var. sinensis HOM05D005313 ORTHO05D006317 6.0e-24 115.9 108 58.3
TPR.G36912 Trifolium pratense HOM05D005313 ORTHO05D006317 7.3e-22 109.0 89 64.0
CAN.G1020.2 Capsicum annuum HOM05D005313 ORTHO05D006317 1.6e-21 107.8 113 54.0
CsaV3_UNG236470 Cucumis sativus L. HOM05D005313 ORTHO05D006317 1.3e-18 98.2 70 74.3
COL.COLO4_10084 Corchorus olitorius HOM05D005313 ORTHO05D006317 8.4e-18 95.5 54 79.6
Aa31LG11G8280 Aethionema arabicum HOM05D005313 ORTHO05D006317 4.6e-16 89.7 62 67.7
BcaC06g31315 Brassica carinata HOM05D005313 ORTHO05D006317 1.7e-15 87.8 59 71.2
TPR.G36891 Trifolium pratense HOM05D005313 ORTHO05D006317 9.6e-14 82.0 46 82.6
Actinidia01955 Actinidia chinensis HOM05D005313 ORTHO05D006317 2.4e-12 77.4 43 81.4
AagrBONN_evm.TU.Sc2ySwM_117.3801 Anthoceros agrestis HOM05D005313 ORTHO05D006317 3.5e-08 63.5 36 75.0
DCAR_023607 Daucus carota HOM05D005313 ORTHO05D006317 1.0e-07 62.0 68 50.0
Oeu045873.1 Olea europaea HOM05D005313 ORTHO05D006317 1.9e-06 57.8 34 76.5


User provided reference genes

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